Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 1ydo_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
TYR 2.A OH     GLN 221.A OE1  no hydrogen  3.311  N/A
VAL 6.A N      LYS 259.A O    no hydrogen  2.992  N/A
THR 7.A OG1    THR 224.A O    no hydrogen  3.373  N/A
LYS 9.A N      PHE 226.A O    no hydrogen  2.716  N/A
LYS 9.A NZ     GLU 171.A OE1  no hydrogen  2.581  N/A
GLU 10.A N     TYR 43.A O     no hydrogen  3.224  N/A
VAL 11.A N     GLY 228.A O    no hydrogen  2.814  N/A
GLY 12.A N     GLU 10.A OE1   no hydrogen  2.836  N/A
ARG 14.A N     VAL 11.A O     no hydrogen  3.185  N/A
ARG 14.A NH1   GLU 45.A OE2   no hydrogen  3.211  N/A
GLY 16.A N     VAL 11.A O     no hydrogen  3.373  N/A
LEU 17.A N     GLY 12.A O     no hydrogen  2.904  N/A
GLN 18.A N     ARG 14.A O     no hydrogen  2.942  N/A
ASN 19.A N     GLY 16.A O     no hydrogen  3.180  N/A
ASN 19.A ND2   GLY 235.A O    no hydrogen  2.876  N/A
GLU 20.A N     LEU 17.A O     no hydrogen  3.235  N/A
LYS 29.A N     ALA 25.A O     no hydrogen  3.061  N/A
LYS 29.A NZ    ILE 24.A O     no hydrogen  2.823  N/A
LYS 29.A NZ    ALA 57.A O     no hydrogen  3.181  N/A
LYS 29.A NZ    ASP 60.A OD1   no hydrogen  3.024  N/A
LYS 29.A NZ    ASP 60.A OD2   no hydrogen  3.442  N/A
ILE 30.A N     THR 26.A O     no hydrogen  3.483  N/A
THR 31.A N     GLU 27.A O     no hydrogen  2.954  N/A
THR 31.A OG1   GLU 27.A O     no hydrogen  3.245  N/A
TRP 32.A N     ASP 28.A O     no hydrogen  2.836  N/A
TRP 32.A NE1   ALA 270.A O    no hydrogen  3.052  N/A
ILE 33.A N     LYS 29.A O     no hydrogen  2.829  N/A
ASN 34.A N     ILE 30.A O     no hydrogen  2.836  N/A
GLN 35.A N     THR 31.A O     no hydrogen  3.422  N/A
GLN 35.A NE2   THR 31.A O     no hydrogen  3.417  N/A
LEU 36.A N     TRP 32.A O     no hydrogen  3.132  N/A
SER 37.A N     ILE 33.A O     no hydrogen  2.880  N/A
SER 37.A OG    ILE 33.A O     no hydrogen  2.881  N/A
SER 37.A OG    TYR 76.A OH    no hydrogen  2.698  N/A
ARG 38.A N     ASN 34.A O     no hydrogen  3.261  N/A
ARG 38.A NH1   ASP 69.A OD1   no hydrogen  2.476  N/A
TYR 43.A OH    GLU 96.A OE2   no hydrogen  3.017  N/A
ILE 44.A N     THR 75.A O     no hydrogen  2.911  N/A
GLU 45.A N     GLU 10.A O     no hydrogen  3.074  N/A
THR 47.A OG1   SER 48.A O     no hydrogen  3.362  N/A
PHE 49.A N     LEU 79.A O     no hydrogen  2.883  N/A
VAL 50.A N     SER 48.A OG    no hydrogen  3.237  N/A
LYS 53.A N     HIS 51.A ND1   no hydrogen  2.962  N/A
TRP 54.A N     HIS 51.A O     no hydrogen  2.888  N/A
LEU 58.A N     ILE 55.A O     no hydrogen  2.759  N/A
VAL 64.A N     ASP 60.A O     no hydrogen  2.820  N/A
ALA 65.A N     ALA 61.A O     no hydrogen  2.840  N/A
LYS 66.A N     ASP 63.A O     no hydrogen  3.273  N/A
LYS 66.A NZ    GLU 91.A OE1   no hydrogen  2.679  N/A
GLY 67.A N     VAL 64.A O     no hydrogen  2.983  N/A
ILE 68.A N     VAL 64.A O     no hydrogen  3.251  N/A
ARG 70.A NH1   GLY 92.A O     no hydrogen  3.506  N/A
ARG 70.A NH2   GLY 93.A O     no hydrogen  2.689  N/A
GLU 71.A N     TYR 76.A OH    no hydrogen  2.805  N/A
LYS 72.A NZ    GLU 71.A OE2   no hydrogen  2.473  N/A
THR 75.A N     SER 42.A O     no hydrogen  2.871  N/A
THR 75.A OG1   SER 42.A O     no hydrogen  3.355  N/A
TYR 76.A OH    SER 37.A OG    no hydrogen  2.698  N/A
ALA 77.A N     ILE 44.A O     no hydrogen  3.006  N/A
ALA 78.A N     GLU 96.A O     no hydrogen  3.085  N/A
LEU 79.A N     THR 47.A O     no hydrogen  3.035  N/A
VAL 80.A N     CYS 98.A O     no hydrogen  3.167  N/A
GLN 83.A NE2   ASP 128.A OD2  no hydrogen  3.223  N/A
LEU 86.A N     ASN 82.A O     no hydrogen  2.743  N/A
GLU 87.A N     GLN 83.A O     no hydrogen  2.871  N/A
ALA 89.A N     GLY 85.A O     no hydrogen  2.892  N/A
LEU 90.A N     LEU 86.A O     no hydrogen  2.900  N/A
GLU 91.A N     GLU 87.A O     no hydrogen  3.212  N/A
GLY 92.A N     ASN 88.A O     no hydrogen  2.913  N/A
GLY 93.A N     ALA 89.A O     no hydrogen  3.095  N/A
GLY 93.A N     LEU 90.A O     no hydrogen  3.369  N/A
ILE 94.A N     ALA 89.A O     no hydrogen  3.313  N/A
ASN 95.A N     TYR 76.A O     no hydrogen  2.813  N/A
GLU 96.A N     TYR 76.A O     no hydrogen  3.299  N/A
ALA 97.A N     THR 135.A O    no hydrogen  3.010  N/A
CYS 98.A N     ALA 78.A O     no hydrogen  3.008  N/A
CYS 98.A SG    TYR 43.A OH    no hydrogen  3.288  N/A
CYS 98.A SG    GLU 45.A OE1   no hydrogen  3.463  N/A
CYS 98.A SG    ALA 78.A O     no hydrogen  3.879  N/A
VAL 99.A N     ARG 137.A O    no hydrogen  2.808  N/A
SER 101.A OG   SER 103.A O    no hydrogen  3.187  N/A
ALA 102.A N    SER 141.A O    no hydrogen  2.994  N/A
SER 103.A N    SER 101.A OG   no hydrogen  3.210  N/A
THR 105.A N    GLU 149.A OE1  no hydrogen  2.940  N/A
THR 105.A OG1  GLU 149.A OE1  no hydrogen  2.718  N/A
HIS 106.A N    SER 103.A OG   no hydrogen  2.903  N/A
ASN 107.A N    SER 103.A O    no hydrogen  2.962  N/A
ARG 108.A N    GLU 104.A O    no hydrogen  2.797  N/A
ARG 108.A NH2  ASN 112.A OD1  no hydrogen  2.746  N/A
LYS 109.A N    THR 105.A O    no hydrogen  2.890  N/A
ILE 111.A N    ASN 107.A O    no hydrogen  3.089  N/A
SER 114.A OG   SER 116.A OG   no hydrogen  2.675  N/A
SER 114.A OG   GLU 117.A OE2  no hydrogen  3.199  N/A
THR 115.A N    GLU 104.A OE1  no hydrogen  3.090  N/A
THR 115.A OG1  GLU 104.A OE1  no hydrogen  3.530  N/A
THR 115.A OG1  GLU 104.A OE2  no hydrogen  2.778  N/A
SER 116.A OG   SER 114.A OG   no hydrogen  2.675  N/A
GLU 117.A N    SER 114.A OG   no hydrogen  3.130  N/A
SER 118.A N    SER 114.A O    no hydrogen  2.846  N/A
SER 118.A OG   ASN 107.A OD1  no hydrogen  3.072  N/A
LEU 119.A N    THR 115.A O    no hydrogen  2.777  N/A
HIS 120.A N    SER 116.A O    no hydrogen  2.803  N/A
ILE 121.A N    GLU 117.A O    no hydrogen  2.974  N/A
LEU 122.A N    SER 118.A O    no hydrogen  2.868  N/A
LYS 123.A N    LEU 119.A O    no hydrogen  2.883  N/A
GLN 124.A N    HIS 120.A O    no hydrogen  3.357  N/A
VAL 125.A N    ILE 121.A O    no hydrogen  2.681  N/A
ASN 126.A N    LEU 122.A O    no hydrogen  2.636  N/A
ASN 126.A ND2  GLN 130.A OE1  no hydrogen  3.654  N/A
ASN 127.A N    LYS 123.A O    no hydrogen  3.155  N/A
ASP 128.A N    GLN 124.A O    no hydrogen  2.990  N/A
ALA 129.A N    VAL 125.A O    no hydrogen  3.278  N/A
GLN 130.A N    ASN 126.A O    no hydrogen  2.990  N/A
GLN 130.A NE2  GLY 168.A O    no hydrogen  2.720  N/A
LYS 131.A N    ASN 127.A O    no hydrogen  3.060  N/A
ALA 132.A N    ALA 129.A O    no hydrogen  2.861  N/A
ASN 133.A N    GLN 130.A O    no hydrogen  2.592  N/A
THR 135.A OG1  ASN 95.A O     no hydrogen  3.495  N/A
THR 135.A OG1  GLU 96.A OE1   no hydrogen  2.875  N/A
THR 136.A OG1  ASN 126.A OD1  no hydrogen  2.629  N/A
ARG 137.A N    ALA 97.A O     no hydrogen  2.996  N/A
ARG 137.A NH2  ASP 227.A OD1  no hydrogen  2.909  N/A
ARG 137.A NH2  ASP 227.A OD2  no hydrogen  2.562  N/A
ALA 138.A N    GLU 171.A O    no hydrogen  2.908  N/A
TYR 139.A N    VAL 99.A O     no hydrogen  2.904  N/A
TYR 139.A OH   ASP 227.A OD1  no hydrogen  2.833  N/A
LEU 140.A N    SER 173.A O    no hydrogen  2.997  N/A
THR 142.A N    THR 177.A OG1  no hydrogen  3.051  N/A
THR 142.A OG1  GLY 145.A O    no hydrogen  2.798  N/A
VAL 143.A N    GLY 175.A O    no hydrogen  3.333  N/A
CYS 146.A N    LYS 150.A O    no hydrogen  2.729  N/A
CYS 146.A SG   SER 103.A OG   no hydrogen  3.101  N/A
LYS 150.A NZ   PRO 147.A O    no hydrogen  3.052  N/A
GLN 156.A N    PRO 153.A O    no hydrogen  3.303  N/A
ILE 158.A N    ILE 154.A O    no hydrogen  3.028  N/A
ARG 159.A N    GLU 155.A O    no hydrogen  2.812  N/A
LEU 160.A N    GLN 156.A O    no hydrogen  2.903  N/A
SER 161.A N    VAL 157.A O    no hydrogen  2.661  N/A
SER 161.A OG   VAL 157.A O    no hydrogen  2.415  N/A
GLU 162.A N    ILE 158.A O    no hydrogen  2.778  N/A
ALA 163.A N    ARG 159.A O    no hydrogen  3.139  N/A
LEU 164.A N    LEU 160.A O    no hydrogen  2.724  N/A
PHE 165.A N    SER 161.A O    no hydrogen  2.943  N/A
GLU 166.A N    GLU 162.A O    no hydrogen  2.848  N/A
PHE 167.A N    ALA 163.A O    no hydrogen  2.997  N/A
PHE 167.A N    LEU 164.A O    no hydrogen  3.193  N/A
GLY 168.A N    PHE 165.A O    no hydrogen  3.097  N/A
SER 170.A N    THR 136.A O    no hydrogen  3.179  N/A
SER 170.A OG   THR 136.A O    no hydrogen  3.534  N/A
LEU 172.A N    GLN 201.A O    no hydrogen  2.950  N/A
SER 173.A N    ALA 138.A O    no hydrogen  2.719  N/A
SER 173.A OG   ASP 227.A OD1  no hydrogen  3.032  N/A
LEU 174.A N    ALA 203.A O    no hydrogen  2.885  N/A
GLY 175.A N    LEU 140.A O    no hydrogen  3.066  N/A
ASP 176.A N    HIS 205.A O    no hydrogen  2.917  N/A
GLY 179.A N    ASP 176.A OD2  no hydrogen  2.994  N/A
GLN 185.A NE2  PHE 144.A O    no hydrogen  3.243  N/A
VAL 186.A N    ASN 182.A O    no hydrogen  2.927  N/A
GLU 187.A N    ALA 184.A O    no hydrogen  3.247  N/A
THR 188.A N    ALA 184.A O    no hydrogen  3.214  N/A
THR 188.A OG1  GLN 185.A O    no hydrogen  3.280  N/A
VAL 189.A N    GLN 185.A O    no hydrogen  2.902  N/A
LEU 190.A N    VAL 186.A O    no hydrogen  3.028  N/A
GLU 191.A N    GLU 187.A O    no hydrogen  2.902  N/A
ALA 192.A N    THR 188.A O    no hydrogen  3.117  N/A
LEU 193.A N    VAL 189.A O    no hydrogen  2.979  N/A
LEU 194.A N    LEU 190.A O    no hydrogen  2.760  N/A
PHE 197.A N    LEU 193.A O    no hydrogen  3.241  N/A
GLN 201.A N    PRO 198.A O    no hydrogen  2.911  N/A
ILE 202.A N    ALA 199.A O    no hydrogen  3.191  N/A
ALA 203.A N    LEU 172.A O    no hydrogen  3.144  N/A
LEU 204.A N    VAL 225.A O    no hydrogen  3.026  N/A
HIS 205.A N    LEU 174.A O    no hydrogen  2.857  N/A
HIS 207.A ND1  THR 177.A O    no hydrogen  2.911  N/A
THR 209.A OG1  SER 243.A O    no hydrogen  3.060  N/A
GLY 211.A N    ASP 208.A O    no hydrogen  2.817  N/A
THR 212.A OG1  ALA 181.A O    no hydrogen  3.165  N/A
ASN 216.A N    THR 212.A O    no hydrogen  2.811  N/A
ASN 216.A ND2  ALA 181.A O    no hydrogen  2.998  N/A
THR 218.A N    ALA 215.A O    no hydrogen  3.380  N/A
ALA 219.A N    ASN 216.A O    no hydrogen  3.006  N/A
GLN 221.A N    VAL 217.A O    no hydrogen  2.968  N/A
PHE 226.A N    THR 7.A O      no hydrogen  3.065  N/A
ASP 227.A N    LEU 204.A O    no hydrogen  2.928  N/A
GLY 228.A N    LYS 9.A O      no hydrogen  2.749  N/A
SER 229.A N    ALA 246.A O    no hydrogen  3.148  N/A
SER 229.A OG   LEU 233.A O    no hydrogen  3.229  N/A
ALA 230.A N    GLU 10.A OE1   no hydrogen  2.640  N/A
GLY 231.A N    GLU 249.A OE2  no hydrogen  3.058  N/A
GLY 232.A N    SER 229.A O    no hydrogen  2.833  N/A
LEU 233.A N    ALA 230.A O    no hydrogen  3.410  N/A
GLY 234.A N    GLU 20.A OE2   no hydrogen  2.906  N/A
GLY 235.A N    ASN 19.A O     no hydrogen  3.488  N/A
CYS 236.A N    SER 242.A O    no hydrogen  3.367  N/A
TYR 238.A OH   PRO 147.A O    no hydrogen  3.240  N/A
ALA 239.A N    CYS 236.A O    no hydrogen  2.985  N/A
SER 242.A OG   ALA 239.A O    no hydrogen  2.446  N/A
SER 243.A OG   ASP 208.A O    no hydrogen  3.321  N/A
ASN 245.A ND2  HIS 205.A NE2  no hydrogen  3.217  N/A
ALA 246.A N    PHE 206.A O    no hydrogen  3.375  N/A
THR 248.A N    SER 229.A O    no hydrogen  3.028  N/A
THR 248.A OG1  GLU 10.A OE2   no hydrogen  2.605  N/A
GLU 249.A N    GLU 249.A OE2  no hydrogen  2.317  N/A
ILE 251.A N    ALA 247.A O    no hydrogen  3.019  N/A
VAL 252.A N    THR 248.A O    no hydrogen  2.787  N/A
TYR 253.A N    GLU 249.A O    no hydrogen  2.720  N/A
GLU 255.A N    VAL 252.A O    no hydrogen  3.046  N/A
GLN 256.A N    TYR 253.A O    no hydrogen  3.045  N/A
ILE 258.A N    LEU 254.A O    no hydrogen  3.027  N/A
LYS 259.A N    LYS 4.A O      no hydrogen  2.877  N/A
LYS 259.A NZ   GLU 255.A OE2  no hydrogen  3.210  N/A
THR 260.A OG1  GLU 255.A OE2  no hydrogen  3.441  N/A
VAL 262.A N    THR 260.A OG1  no hydrogen  3.168  N/A
LYS 263.A N    THR 39.A O     no hydrogen  3.089  N/A
LEU 267.A N    LYS 263.A O    no hydrogen  3.220  N/A
LEU 268.A N    LEU 264.A O    no hydrogen  2.748  N/A
SER 269.A N    GLU 265.A O    no hydrogen  3.040  N/A
ALA 270.A N    LYS 266.A O    no hydrogen  2.896  N/A
ALA 271.A N    LEU 267.A O    no hydrogen  2.767  N/A
LYS 272.A N    LEU 268.A O    no hydrogen  2.986  N/A
TRP 273.A N    SER 269.A O    no hydrogen  3.155  N/A
GLU 275.A N    ALA 271.A O    no hydrogen  3.155  N/A
GLU 276.A N    LYS 272.A O    no hydrogen  3.017  N/A
GLU 276.A N    TRP 273.A O    no hydrogen  2.882  N/A
LYS 277.A N    TRP 273.A O    no hydrogen  3.076  N/A
LYS 279.A NZ   GLU 20.A OE1   no hydrogen  2.880  N/A
LEU 281.A N    GLU 275.A OE1  no hydrogen  2.935  N/A
SER 283.A N    GLY 231.A O    no hydrogen  3.197  N/A
SER 283.A OG   GLU 249.A OE1  no hydrogen  2.704  N/A
ARG 284.A N    ASP 250.A OD1  no hydrogen  3.244  N/A
ASN 285.A N    ASP 250.A OD2  no hydrogen  2.979  N/A
LEU 286.A N    SER 283.A OG   no hydrogen  3.148  N/A
GLN 287.A NE2  SER 283.A O    no hydrogen  3.307  N/A
VAL 288.A N    ARG 284.A O    no hydrogen  3.218  N/A
PHE 289.A N    ASN 285.A O    no hydrogen  2.726  N/A
LYS 290.A N    LEU 286.A O    no hydrogen  2.966  N/A
LYS 290.A NZ   GLU 275.A OE1  no hydrogen  3.202  N/A
LYS 290.A NZ   GLU 275.A OE2  no hydrogen  3.086  N/A
SER 291.A N    VAL 288.A O    no hydrogen  2.788  N/A
SER 291.A OG   PHE 289.A O    no hydrogen  3.381  N/A