Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 1ypt_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
ARG 4.A NH1    ASP 262.A OD1  no hydrogen  2.961  N/A
ALA 5.A N      PRO 1.A O      no hydrogen  3.086  N/A
GLU 6.A N      GLU 2.A O      no hydrogen  3.079  N/A
LEU 7.A N      ALA 3.A O      no hydrogen  2.994  N/A
SER 8.A N      ARG 4.A O      no hydrogen  2.902  N/A
SER 8.A OG     ARG 4.A O      no hydrogen  3.324  N/A
SER 9.A N      ALA 5.A O      no hydrogen  3.030  N/A
SER 9.A N      GLU 6.A O      no hydrogen  2.948  N/A
SER 9.A OG     ALA 5.A O      no hydrogen  2.844  N/A
ARG 10.A N     GLU 6.A O      no hydrogen  3.054  N/A
ARG 10.A NE    GLU 6.A OE2    no hydrogen  2.864  N/A
ARG 10.A NH1   GLU 240.A OE2  no hydrogen  3.544  N/A
ARG 10.A NH1   ASN 277.A O    no hydrogen  3.168  N/A
ARG 10.A NH2   GLU 6.A OE2    no hydrogen  3.380  N/A
LEU 11.A N     LEU 7.A O      no hydrogen  3.057  N/A
THR 12.A N     SER 8.A O      no hydrogen  2.835  N/A
THR 12.A OG1   SER 8.A O      no hydrogen  2.745  N/A
THR 13.A N     SER 9.A O      no hydrogen  3.032  N/A
THR 13.A OG1   SER 9.A O      no hydrogen  2.952  N/A
LEU 14.A N     ARG 10.A O     no hydrogen  3.079  N/A
ARG 15.A N     LEU 11.A O     no hydrogen  3.012  N/A
ASN 16.A N     THR 12.A O     no hydrogen  2.997  N/A
THR 17.A N     THR 13.A O     no hydrogen  2.968  N/A
THR 17.A OG1   THR 13.A O     no hydrogen  2.879  N/A
LEU 18.A N     LEU 14.A O     no hydrogen  2.910  N/A
ALA 19.A N     ASN 16.A O     no hydrogen  3.435  N/A
ALA 21.A N     ASP 24.A OD2   no hydrogen  2.933  N/A
ARG 26.A N     ASP 24.A OD1   no hydrogen  3.009  N/A
ARG 26.A NE    ASP 24.A OD1   no hydrogen  3.047  N/A
ARG 26.A NE    ASP 24.A OD2   no hydrogen  3.233  N/A
ARG 26.A NH1   THR 17.A O     no hydrogen  2.977  N/A
ARG 26.A NH2   THR 17.A O     no hydrogen  3.539  N/A
ARG 26.A NH2   ASP 24.A OD2   no hydrogen  2.842  N/A
TYR 27.A N     ASP 24.A O     no hydrogen  2.965  N/A
TYR 27.A OH    LEU 18.A O     no hydrogen  2.606  N/A
LEU 28.A N     CYS 44.A O     no hydrogen  2.889  N/A
GLN 29.A NE2   ASP 24.A O     no hydrogen  2.920  N/A
GLN 29.A NE2   TYR 27.A O     no hydrogen  2.900  N/A
CYS 31.A SG    GLN 29.A O     no hydrogen  3.944  N/A
ARG 38.A N     GLN 70.A OE1   no hydrogen  3.129  N/A
ARG 38.A NE    TYR 71.A O     no hydrogen  2.899  N/A
ARG 38.A NH1   GLY 107.A O    no hydrogen  2.983  N/A
ARG 38.A NH2   TYR 71.A O     no hydrogen  2.948  N/A
ARG 38.A NH2   PRO 72.A O     no hydrogen  2.939  N/A
ARG 38.A NH2   GLY 107.A O    no hydrogen  3.170  N/A
ILE 42.A N     PHE 39.A O     no hydrogen  3.130  N/A
GLN 43.A NE2   ARG 40.A O     no hydrogen  2.899  N/A
CYS 44.A SG    ARG 45.A O     no hydrogen  3.968  N/A
CYS 44.A SG    LEU 54.A O     no hydrogen  4.010  N/A
CYS 44.A SG    ALA 56.A O     no hydrogen  3.423  N/A
CYS 44.A SG    ASN 57.A OD1   no hydrogen  3.375  N/A
ARG 45.A N     ARG 250.A O    no hydrogen  2.889  N/A
ARG 46.A N     ARG 26.A O     no hydrogen  2.884  N/A
THR 48.A N     ARG 45.A O     no hydrogen  3.359  N/A
THR 48.A OG1   ARG 45.A O     no hydrogen  3.367  N/A
THR 48.A OG1   GLN 249.A O    no hydrogen  2.739  N/A
ALA 49.A N     ARG 46.A O     no hydrogen  3.072  N/A
VAL 50.A N     ALA 56.A O     no hydrogen  3.224  N/A
ARG 51.A NE    ASP 53.A OD1   no hydrogen  3.203  N/A
LEU 54.A N     ARG 51.A O     no hydrogen  3.330  N/A
ASN 55.A ND2   ASN 37.A OD1   no hydrogen  2.715  N/A
ASN 55.A ND2   ILE 42.A O     no hydrogen  3.025  N/A
ASN 57.A N     ALA 68.A O     no hydrogen  2.984  N/A
ASN 57.A ND2   ARG 45.A O     no hydrogen  2.730  N/A
ASN 57.A ND2   THR 48.A OG1   no hydrogen  2.844  N/A
TYR 58.A N     THR 48.A O     no hydrogen  2.923  N/A
ILE 59.A N     THR 66.A O     no hydrogen  3.004  N/A
GLN 60.A N     GLN 249.A OE1  no hydrogen  2.881  N/A
GLN 60.A NE2   GLY 62.A O     no hydrogen  2.974  N/A
VAL 61.A N     THR 64.A O     no hydrogen  2.873  N/A
ASN 63.A N     ASN 234.A OD1  no hydrogen  2.748  N/A
THR 64.A N     VAL 61.A O     no hydrogen  2.989  N/A
THR 66.A N     ILE 59.A O     no hydrogen  3.017  N/A
ILE 67.A N     PRO 209.A O    no hydrogen  2.841  N/A
ALA 68.A N     ASN 57.A O     no hydrogen  3.059  N/A
CYS 69.A N     ILE 211.A O    no hydrogen  3.247  N/A
CYS 69.A SG    GLN 70.A O     no hydrogen  3.634  N/A
GLN 70.A N     ASN 55.A O     no hydrogen  3.213  N/A
GLN 70.A NE2   LEU 36.A O     no hydrogen  2.974  N/A
GLN 70.A NE2   GLN 76.A OE1   no hydrogen  3.038  N/A
TYR 71.A N     ARG 214.A O    no hydrogen  2.740  N/A
TYR 71.A OH    PRO 109.A O    no hydrogen  2.589  N/A
LEU 73.A N     GLN 76.A OE1   no hydrogen  2.962  N/A
GLN 76.A N     LEU 73.A O     no hydrogen  2.845  N/A
GLN 76.A NE2   LYS 35.A O     no hydrogen  3.469  N/A
GLN 76.A NE2   LEU 36.A O     no hydrogen  2.993  N/A
LEU 77.A N     GLN 74.A O     no hydrogen  3.360  N/A
SER 79.A OG    ASP 53.A OD2   no hydrogen  2.874  N/A
HIS 80.A N     GLN 76.A O     no hydrogen  2.871  N/A
HIS 80.A NE2   TYR 111.A OH   no hydrogen  2.948  N/A
PHE 81.A N     LEU 77.A O     no hydrogen  2.835  N/A
ARG 82.A N     GLU 78.A O     no hydrogen  2.987  N/A
ARG 82.A NH1   GLU 148.A OE2  no hydrogen  3.012  N/A
ARG 82.A NH2   SER 120.A OG   no hydrogen  3.351  N/A
MET 83.A N     SER 79.A O     no hydrogen  2.818  N/A
LEU 84.A N     HIS 80.A O     no hydrogen  3.061  N/A
ALA 85.A N     PHE 81.A O     no hydrogen  3.021  N/A
GLU 86.A N     ARG 82.A O     no hydrogen  2.923  N/A
ASN 87.A N     MET 83.A O     no hydrogen  3.035  N/A
ASN 87.A ND2   THR 89.A OG1   no hydrogen  2.985  N/A
ASN 87.A ND2   ARG 208.A O    no hydrogen  2.883  N/A
ARG 88.A N     ALA 85.A O     no hydrogen  2.889  N/A
ARG 88.A NE    ALA 85.A O     no hydrogen  2.990  N/A
ARG 88.A NH2   ALA 85.A O     no hydrogen  3.494  N/A
THR 89.A N     LEU 84.A O     no hydrogen  3.269  N/A
THR 89.A OG1   LEU 84.A O     no hydrogen  2.686  N/A
LEU 92.A N     PRO 157.A O    no hydrogen  2.864  N/A
ALA 93.A N     VAL 210.A O    no hydrogen  2.855  N/A
VAL 94.A N     VAL 159.A O    no hydrogen  2.956  N/A
LEU 95.A N     HIS 212.A O    no hydrogen  2.882  N/A
SER 97.A OG    SER 99.A OG    no hydrogen  3.412  N/A
SER 97.A OG    GLU 100.A OE2  no hydrogen  2.999  N/A
SER 97.A OG    ASP 166.A OD1  no hydrogen  2.850  N/A
SER 98.A N     GLY 162.A O    no hydrogen  3.044  N/A
SER 98.A OG    GLY 162.A O    no hydrogen  3.472  N/A
SER 99.A OG    SER 97.A OG    no hydrogen  3.412  N/A
GLU 100.A N    SER 97.A O     no hydrogen  3.041  N/A
GLU 100.A N    SER 97.A OG    no hydrogen  3.320  N/A
ILE 101.A N    SER 97.A O     no hydrogen  3.051  N/A
ALA 102.A N    SER 98.A O     no hydrogen  2.846  N/A
ASN 103.A N    GLU 100.A O    no hydrogen  3.274  N/A
ARG 105.A N    ASN 103.A OD1  no hydrogen  2.964  N/A
PHE 106.A N    ASN 103.A O    no hydrogen  3.094  N/A
GLY 107.A N    GLN 104.A O    no hydrogen  2.994  N/A
TYR 111.A N    PRO 109.A O    no hydrogen  2.806  N/A
TYR 111.A OH   HIS 212.A NE2  no hydrogen  2.650  N/A
ARG 113.A NE   TYR 142.A OH   no hydrogen  3.363  N/A
ARG 113.A NH1  ASP 110.A OD1  no hydrogen  3.079  N/A
GLN 114.A NE2  ASP 110.A O    no hydrogen  3.181  N/A
GLY 116.A N    VAL 123.A O    no hydrogen  3.031  N/A
TYR 118.A N    ILE 121.A O    no hydrogen  2.710  N/A
SER 120.A N    GLU 78.A OE2   no hydrogen  2.988  N/A
SER 120.A OG   GLU 78.A OE2   no hydrogen  2.864  N/A
SER 120.A OG   GLU 148.A OE2  no hydrogen  3.351  N/A
ILE 121.A N    TYR 118.A O    no hydrogen  2.870  N/A
THR 122.A N    ARG 147.A O    no hydrogen  2.994  N/A
VAL 123.A N    GLY 116.A O    no hydrogen  2.868  N/A
GLU 124.A N    THR 145.A O    no hydrogen  3.169  N/A
SER 125.A OG   PHE 112.A O    no hydrogen  2.740  N/A
SER 125.A OG   GLN 114.A O    no hydrogen  3.275  N/A
LYS 126.A N    THR 143.A O    no hydrogen  3.150  N/A
THR 128.A N    MET 141.A O    no hydrogen  2.928  N/A
VAL 131.A N    ALA 139.A O    no hydrogen  2.816  N/A
LEU 133.A N    ILE 137.A O    no hydrogen  2.839  N/A
ILE 137.A N    GLY 134.A O    no hydrogen  2.901  N/A
MET 138.A N    ASN 163.A OD1  no hydrogen  2.884  N/A
ALA 139.A N    VAL 131.A O    no hydrogen  2.800  N/A
ASP 140.A N    HIS 160.A O    no hydrogen  2.826  N/A
MET 141.A N    GLN 129.A O    no hydrogen  2.795  N/A
TYR 142.A N    VAL 158.A O    no hydrogen  3.100  N/A
THR 143.A N    LYS 126.A O    no hydrogen  2.888  N/A
LEU 144.A N    VAL 156.A O    no hydrogen  2.853  N/A
THR 145.A N    GLU 124.A O    no hydrogen  2.946  N/A
ILE 146.A N    ILE 154.A O    no hydrogen  2.880  N/A
ARG 147.A N    THR 122.A O    no hydrogen  2.896  N/A
GLN 151.A N    GLU 148.A O    no hydrogen  2.905  N/A
ILE 154.A N    ILE 146.A O    no hydrogen  3.021  N/A
VAL 156.A N    LEU 144.A O    no hydrogen  2.743  N/A
VAL 158.A N    TYR 142.A O    no hydrogen  3.057  N/A
VAL 159.A N    LEU 92.A O     no hydrogen  2.827  N/A
HIS 160.A N    ASP 140.A O    no hydrogen  2.824  N/A
HIS 160.A NE2  ALA 96.A O     no hydrogen  2.734  N/A
VAL 161.A N    VAL 94.A O     no hydrogen  3.094  N/A
ASN 163.A ND2  GLY 136.A O    no hydrogen  2.748  N/A
TRP 164.A N    VAL 161.A O    no hydrogen  3.302  N/A
VAL 174.A N    SER 171.A OG   no hydrogen  3.237  N/A
THR 175.A N    SER 171.A O    no hydrogen  3.037  N/A
THR 175.A OG1  SER 171.A O    no hydrogen  2.933  N/A
LYS 176.A N    SER 172.A O    no hydrogen  2.964  N/A
ALA 177.A N    GLU 173.A O    no hydrogen  3.189  N/A
LEU 178.A N    VAL 174.A O    no hydrogen  2.979  N/A
ALA 179.A N    THR 175.A O    no hydrogen  2.858  N/A
SER 180.A N    LYS 176.A O    no hydrogen  2.996  N/A
LEU 181.A N    ALA 177.A O    no hydrogen  3.065  N/A
VAL 182.A N    LEU 178.A O    no hydrogen  2.975  N/A
ASP 183.A N    ALA 179.A O    no hydrogen  2.902  N/A
GLN 184.A N    SER 180.A O    no hydrogen  3.055  N/A
GLN 184.A NE2  SER 180.A O    no hydrogen  3.124  N/A
GLN 184.A NE2  SER 180.A OG   no hydrogen  3.003  N/A
THR 185.A N    LEU 181.A O    no hydrogen  3.012  N/A
THR 185.A OG1  LEU 181.A O    no hydrogen  2.892  N/A
ALA 186.A N    VAL 182.A O    no hydrogen  3.084  N/A
GLU 187.A N    ASP 183.A O    no hydrogen  2.841  N/A
THR 188.A N    GLN 184.A O    no hydrogen  3.108  N/A
THR 188.A OG1  GLN 184.A O    no hydrogen  2.885  N/A
LYS 189.A N    THR 185.A O    no hydrogen  3.145  N/A
ARG 190.A N    ALA 186.A O    no hydrogen  2.851  N/A
ARG 190.A NH2  LEU 207.A O    no hydrogen  2.760  N/A
ASN 191.A N    GLU 187.A O    no hydrogen  3.017  N/A
MET 192.A N    THR 188.A O    no hydrogen  3.101  N/A
TYR 193.A N    LYS 189.A O    no hydrogen  3.114  N/A
GLU 194.A N    ARG 190.A O    no hydrogen  2.951  N/A
SER 195.A N    ASN 191.A O    no hydrogen  2.869  N/A
SER 195.A OG   ASN 191.A O    no hydrogen  3.293  N/A
SER 195.A OG   MET 192.A O    no hydrogen  3.184  N/A
LYS 196.A N    MET 192.A O    no hydrogen  3.104  N/A
GLY 197.A N    GLU 194.A O    no hydrogen  2.869  N/A
SER 198.A N    TYR 193.A O    no hydrogen  2.992  N/A
VAL 201.A N    SER 198.A O    no hydrogen  3.365  N/A
ALA 202.A N    SER 199.A O    no hydrogen  2.850  N/A
ASP 203.A N    ALA 200.A O    no hydrogen  2.945  N/A
SER 205.A N    ASP 203.A OD1  no hydrogen  3.184  N/A
SER 205.A OG   ASP 203.A OD1  no hydrogen  2.764  N/A
LYS 206.A N    ASP 203.A O    no hydrogen  3.123  N/A
LEU 207.A N    ASN 87.A O     no hydrogen  2.760  N/A
ARG 208.A N    ASN 87.A OD1   no hydrogen  2.963  N/A
ARG 208.A NE   ASP 204.A O    no hydrogen  3.365  N/A
ARG 208.A NH1  THR 66.A O     no hydrogen  3.097  N/A
ARG 208.A NH2  ASP 204.A O    no hydrogen  3.334  N/A
VAL 210.A N    VAL 91.A O     no hydrogen  3.098  N/A
ILE 211.A N    ILE 67.A O     no hydrogen  2.978  N/A
HIS 212.A N    ALA 93.A O     no hydrogen  3.046  N/A
HIS 212.A ND1  CYS 213.A O    no hydrogen  2.954  N/A
HIS 212.A NE2  TYR 111.A OH   no hydrogen  2.650  N/A
CYS 213.A SG   THR 220.A OG1  no hydrogen  3.072  N/A
ARG 219.A NH1  LEU 95.A O     no hydrogen  2.629  N/A
ARG 219.A NH1  GLU 100.A OE1  no hydrogen  3.100  N/A
ARG 219.A NH1  GLU 100.A OE2  no hydrogen  3.262  N/A
ARG 219.A NH2  GLU 100.A OE2  no hydrogen  3.019  N/A
GLN 222.A N    GLY 218.A O    no hydrogen  2.958  N/A
GLN 222.A NE2  THR 175.A OG1  no hydrogen  2.868  N/A
LEU 223.A N    ARG 219.A O    no hydrogen  2.924  N/A
ILE 224.A N    THR 220.A O    no hydrogen  2.908  N/A
GLY 225.A N    ALA 221.A O    no hydrogen  2.895  N/A
ALA 226.A N    GLN 222.A O    no hydrogen  3.148  N/A
MET 227.A N    LEU 223.A O    no hydrogen  2.901  N/A
CYS 228.A N    ILE 224.A O    no hydrogen  2.950  N/A
CYS 228.A SG   VAL 61.A O     no hydrogen  3.929  N/A
CYS 228.A SG   ILE 224.A O    no hydrogen  3.315  N/A
MET 229.A N    GLY 225.A O    no hydrogen  3.007  N/A
ASN 230.A N    ALA 226.A O    no hydrogen  3.103  N/A
ASN 230.A N    MET 227.A O    no hydrogen  3.226  N/A
ASP 231.A N    CYS 228.A O    no hydrogen  3.125  N/A
ARG 233.A NE   ASP 231.A OD2  no hydrogen  2.929  N/A
ARG 233.A NH2  ASP 231.A OD2  no hydrogen  3.367  N/A
ASN 234.A N    ASP 231.A O    no hydrogen  2.866  N/A
ASN 234.A ND2  THR 64.A OG1   no hydrogen  2.965  N/A
ASN 234.A ND2  CYS 228.A O    no hydrogen  2.898  N/A
SER 235.A N    SER 232.A O    no hydrogen  3.190  N/A
LEU 237.A N    ASN 234.A O    no hydrogen  2.941  N/A
SER 238.A N    ASP 241.A OD2  no hydrogen  3.473  N/A
SER 238.A OG   ASP 241.A OD2  no hydrogen  3.056  N/A
SER 238.A OG   ASN 277.A OD1  no hydrogen  2.887  N/A
VAL 239.A N    PRO 274.A O    no hydrogen  3.010  N/A
GLU 240.A N    LEU 275.A O    no hydrogen  2.808  N/A
ASP 241.A N    SER 238.A OG   no hydrogen  3.106  N/A
MET 242.A N    SER 238.A O    no hydrogen  3.178  N/A
VAL 243.A N    VAL 239.A O    no hydrogen  3.130  N/A
SER 244.A N    GLU 240.A O    no hydrogen  3.121  N/A
SER 244.A OG   GLU 240.A O    no hydrogen  2.751  N/A
GLN 245.A N    ASP 241.A O    no hydrogen  2.966  N/A
MET 246.A N    MET 242.A O    no hydrogen  3.139  N/A
ARG 247.A N    VAL 243.A O    no hydrogen  2.870  N/A
ARG 247.A NE   MET 254.A O    no hydrogen  2.697  N/A
ARG 247.A NH2  MET 254.A O    no hydrogen  2.972  N/A
ARG 247.A NH2  VAL 255.A O    no hydrogen  3.078  N/A
VAL 248.A N    SER 244.A O    no hydrogen  3.004  N/A
GLN 249.A N    GLN 245.A O    no hydrogen  3.020  N/A
GLN 249.A NE2  GLN 60.A O     no hydrogen  2.915  N/A
ARG 250.A N    MET 246.A O    no hydrogen  2.932  N/A
ARG 250.A NE   GLY 216.A O    no hydrogen  3.129  N/A
ARG 250.A NH1  ASN 55.A OD1   no hydrogen  2.768  N/A
ARG 250.A NH1  ASN 57.A OD1   no hydrogen  2.785  N/A
ARG 250.A NH2  ASN 55.A OD1   no hydrogen  2.975  N/A
ARG 250.A NH2  ALA 215.A O    no hydrogen  2.920  N/A
ASN 251.A ND2  GLN 43.A O     no hydrogen  2.944  N/A
ILE 253.A N    ASN 251.A OD1  no hydrogen  2.923  N/A
MET 254.A N    ASN 251.A O    no hydrogen  3.243  N/A
VAL 255.A N    VAL 217.A O    no hydrogen  2.835  N/A
LYS 257.A N    GLN 260.A OE1  no hydrogen  2.835  N/A
GLN 260.A N    LYS 257.A O    no hydrogen  2.737  N/A
LEU 261.A N    LYS 257.A O    no hydrogen  3.201  N/A
ASP 262.A N    ASP 258.A O    no hydrogen  2.856  N/A
VAL 263.A N    GLU 259.A O    no hydrogen  3.390  N/A
LEU 264.A N    GLN 260.A O    no hydrogen  3.338  N/A
ILE 265.A N    LEU 261.A O    no hydrogen  2.855  N/A
LYS 266.A N    ASP 262.A O    no hydrogen  2.908  N/A
LEU 267.A N    VAL 263.A O    no hydrogen  3.105  N/A
ALA 268.A N    LEU 264.A O    no hydrogen  3.053  N/A
GLU 269.A N    ILE 265.A O    no hydrogen  2.837  N/A
GLY 270.A N    LYS 266.A O    no hydrogen  3.045  N/A
GLN 271.A N    ALA 268.A O    no hydrogen  2.842  N/A
GLN 271.A NE2  MET 229.A O    no hydrogen  2.755  N/A
GLY 272.A N    GLU 269.A O    no hydrogen  2.961  N/A
ARG 273.A N    ALA 268.A O    no hydrogen  2.982  N/A
ARG 273.A NE   GLN 271.A OE1  no hydrogen  2.882  N/A
ARG 273.A NH1  ASN 234.A O    no hydrogen  2.897  N/A
ARG 273.A NH1  LEU 237.A O    no hydrogen  2.891  N/A
ARG 273.A NH2  GLN 271.A OE1  no hydrogen  2.770  N/A
ASN 277.A N    GLU 240.A OE1  no hydrogen  3.005  N/A
ASN 277.A ND2  ASP 241.A OD1  no hydrogen  3.068  N/A
SER 278.A OG   ASN 277.A O    no hydrogen  2.762  N/A