1A1WA

Fadd death effector domain, f25y mutant, nmr minimized average structure
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
83
structure length
83
Chain Sequence
MDPFLVLLHSVSSSLSSSELTELKYLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTELLRELLASLRRHDLLRRVDDFE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Apoptosis
molecule keywords FADD PROTEIN
publication title NMR structure and mutagenesis of the FADD (Mort1) death-effector domain.
pubmed doi rcsb
source organism Homo sapiens
total genus 23
structure length 83
sequence length 83
ec nomenclature
pdb deposition date 1997-12-18
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 1a1wA00
2B1WA 1E41A 3YGSC 4ZBWA 1UCPA 2NAQA 3MOPG 4JUPA 4LWDA 2N7ZA 1CY5A 2A5YB 2LWEA 4IZAB 4M9XA 2A9IA 2DBDA 4UZ0A 4DWNA 2LWDA 3CL3A 3MOPA 4JQWA 4F42A 1D2ZA 1Z6TA 1CWWA 2DBGA 1NGRA 4IZ5E 3CRDA 2N00A 2P1HA 3MOPK 4P4HI 4EWIA 2N97A 2YU0A 2LS7A 3EZQA 4O9LA 3T6PA 4M9SA 1FADA 2L6AA 4IZ7B 2G7RA 4O7QA 2N83A 4RHWA 3QF2A 2KM6A 2HM2Q 2MPCA 2MN4A 2D96A 4D8OA 2BBRA 2YVIA 3YGSP 2DBHA 2OF5A 2NZ7A 1C15A 2MS7A 2DBFA 4FH0A 1ICHA 4NQKA 1E3YA 4M9ZA 2OF5H 4I16A 4N1JA 2F1SA 2MB9A 1D2ZB 2L9MA 2M5VA 3J63A 2YGSA 3KATA 2NSNA 2IB1A 2VGQA 1A1WA 3LQQA 2N80A 1WH4A 3EZQB 1N3KA 2YQFA 2BBZA 1A1ZA 2DO9A 2KN6A 1PN5A 2N1FA 4N1KA 1DGNA 1YGOA 1WXPA 4E9MA 4O9FA 3LQRA 4QOBA 1DDFA 4RHWE 2GF5A 2MS8A 4P4HA 4N1LA 2O71A 3J6JA 1WMGA 4O6XA 4A2QA 4F44A 4A2WA
chains in the Genus database with same CATH superfamily
2MJMA 2B1WA 1E41A 3YGSC 4ZBWA 1UCPA 2NAQA 3MOPG 4JUPA 4LWDA 2N7ZA 1CY5A 2A5YB 2LWEA 4IZAB 4M9XA 2A9IA 2DBDA 4UZ0A 4DWNA 2LWDA 3CL3A 3MOPA 4JQWA 4F42A 1D2ZA 1Z6TA 1CWWA 2DBGA 1NGRA 4IZ5E 3CRDA 2N00A 2P1HA 3MOPK 4P4HI 4EWIA 2N97A 2YU0A 2LS7A 3EZQA 4O9LA 3T6PA 4M9SA 1FADA 2L6AA 4IZ7B 2G7RA 4O7QA 2N83A 4RHWA 3QF2A 2KM6A 2HM2Q 2MPCA 2MN4A 2D96A 4D8OA 2BBRA 2YVIA 3YGSP 2DBHA 2OF5A 2NZ7A 1C15A 2MS7A 2DBFA 4FH0A 1ICHA 4NQKA 1E3YA 4M9ZA 2OF5H 4I16A 4N1JA 2F1SA 2MB9A 1D2ZB 2L9MA 2M5VA 3J63A 2YGSA 3KATA 2NSNA 2IB1A 2VGQA 1A1WA 3LQQA 2N80A 1WH4A 3EZQB 1N3KA 2YQFA 2BBZA 1A1ZA 2DO9A 2KN6A 1PN5A 2N1FA 4N1KA 1DGNA 1YGOA 1WXPA 2XV9A 4E9MA 4O9FA 3LQRA 4QOBA 1DDFA 4RHWE 2GF5A 2MS8A 4P4HA 4N1LA 2O71A 3J6JA 1WMGA 4O6XA 4A2QA 4F44A 4A2WA
chains in the Genus database with same CATH topology
2MJMA 2B1WA 1E41A 3YGSC 4ZBWA 1UCPA 2NAQA 3MOPG 4JUPA 4LWDA 2N7ZA 1CY5A 2A5YB 2LWEA 4IZAB 4M9XA 2A9IA 2DBDA 4UZ0A 4DWNA 2LWDA 3CL3A 3MOPA 4JQWA 4F42A 1D2ZA 1Z6TA 1CWWA 2DBGA 1NGRA 4IZ5E 3CRDA 2N00A 2P1HA 3MOPK 4P4HI 4EWIA 2N97A 2YU0A 2LS7A 3EZQA 4O9LA 3T6PA 4M9SA 1FADA 2L6AA 4IZ7B 2G7RA 4O7QA 2N83A 4RHWA 3QF2A 2KM6A 2HM2Q 2MPCA 2MN4A 2D96A 4D8OA 2BBRA 2YVIA 3YGSP 2DBHA 2OF5A 2NZ7A 1C15A 2MS7A 2DBFA 4FH0A 1ICHA 4NQKA 1E3YA 4M9ZA 2OF5H 4I16A 4N1JA 2F1SA 2MB9A 1D2ZB 2L9MA 2M5VA 3J63A 2YGSA 3KATA 2NSNA 2IB1A 2VGQA 1A1WA 3LQQA 2N80A 1WH4A 3EZQB 1N3KA 2YQFA 2BBZA 1A1ZA 2DO9A 2KN6A 1PN5A 2N1FA 4N1KA 1DGNA 1YGOA 1WXPA 2XV9A 4E9MA 4O9FA 3LQRA 4QOBA 1DDFA 4RHWE 2GF5A 2MS8A 4P4HA 4N1LA 2O71A 3J6JA 1WMGA 4O6XA 4A2QA 4F44A 4A2WA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2B1W A;  1E41 A;  3YGS C;  4ZBW A;  1UCP A;  2NAQ A;  3MOP G;  4JUP A;  4LWD A;  2N7Z A;  1CY5 A;  2A5Y B;  2LWE A;  4IZA B;  4M9X A;  2A9I A;  2DBD A;  4UZ0 A;  4DWN A;  2LWD A;  3CL3 A;  3MOP A;  4JQW A;  4F42 A;  1D2Z A;  1Z6T A;  1CWW A;  2DBG A;  1NGR A;  4IZ5 E;  3CRD A;  2N00 A;  2P1H A;  3MOP K;  4P4H I;  4EWI A;  2N97 A;  2YU0 A;  2LS7 A;  3EZQ A;  4O9L A;  3T6P A;  4M9S A;  1FAD A;  2L6A A;  4IZ7 B;  2G7R A;  4O7Q A;  2N83 A;  4RHW A;  3QF2 A;  2KM6 A;  2HM2 Q;  2MPC A;  2MN4 A;  2D96 A;  4D8O A;  2BBR A;  2YVI A;  3YGS P;  2DBH A;  2OF5 A;  2NZ7 A;  1C15 A;  2MS7 A;  2DBF A;  4FH0 A;  1ICH A;  4NQK A;  1E3Y A;  4M9Z A;  2OF5 H;  4I16 A;  4N1J A;  2F1S A;  2MB9 A;  1D2Z B;  2L9M A;  2M5V A;  3J63 A;  2YGS A;  3KAT A;  2NSN A;  2IB1 A;  2VGQ A;  1A1W A;  3LQQ A;  2N80 A;  1WH4 A;  3EZQ B;  1N3K A;  2YQF A;  2BBZ A;  1A1Z A;  2DO9 A;  2KN6 A;  1PN5 A;  2N1F A;  4N1K A;  1DGN A;  1YGO A;  1WXP A;  4E9M A;  4O9F A;  3LQR A;  4QOB A;  1DDF A;  4RHW E;  2GF5 A;  2MS8 A;  4P4H A;  4N1L A;  2O71 A;  3J6J A;  1WMG A;  4O6X A;  4A2Q A;  4F44 A;  4A2W A; 
#chains in the Genus database with same CATH topology
 2MJM A;  2B1W A;  1E41 A;  3YGS C;  4ZBW A;  1UCP A;  2NAQ A;  3MOP G;  4JUP A;  4LWD A;  2N7Z A;  1CY5 A;  2A5Y B;  2LWE A;  4IZA B;  4M9X A;  2A9I A;  2DBD A;  4UZ0 A;  4DWN A;  2LWD A;  3CL3 A;  3MOP A;  4JQW A;  4F42 A;  1D2Z A;  1Z6T A;  1CWW A;  2DBG A;  1NGR A;  4IZ5 E;  3CRD A;  2N00 A;  2P1H A;  3MOP K;  4P4H I;  4EWI A;  2N97 A;  2YU0 A;  2LS7 A;  3EZQ A;  4O9L A;  3T6P A;  4M9S A;  1FAD A;  2L6A A;  4IZ7 B;  2G7R A;  4O7Q A;  2N83 A;  4RHW A;  3QF2 A;  2KM6 A;  2HM2 Q;  2MPC A;  2MN4 A;  2D96 A;  4D8O A;  2BBR A;  2YVI A;  3YGS P;  2DBH A;  2OF5 A;  2NZ7 A;  1C15 A;  2MS7 A;  2DBF A;  4FH0 A;  1ICH A;  4NQK A;  1E3Y A;  4M9Z A;  2OF5 H;  4I16 A;  4N1J A;  2F1S A;  2MB9 A;  1D2Z B;  2L9M A;  2M5V A;  3J63 A;  2YGS A;  3KAT A;  2NSN A;  2IB1 A;  2VGQ A;  1A1W A;  3LQQ A;  2N80 A;  1WH4 A;  3EZQ B;  1N3K A;  2YQF A;  2BBZ A;  1A1Z A;  2DO9 A;  2KN6 A;  1PN5 A;  2N1F A;  4N1K A;  1DGN A;  1YGO A;  1WXP A;  2XV9 A;  4E9M A;  4O9F A;  3LQR A;  4QOB A;  1DDF A;  4RHW E;  2GF5 A;  2MS8 A;  4P4H A;  4N1L A;  2O71 A;  3J6J A;  1WMG A;  4O6X A;  4A2Q A;  4F44 A;  4A2W A; 
#chains in the Genus database with same CATH homology
 2MJM A;  2B1W A;  1E41 A;  3YGS C;  4ZBW A;  1UCP A;  2NAQ A;  3MOP G;  4JUP A;  4LWD A;  2N7Z A;  1CY5 A;  2A5Y B;  2LWE A;  4IZA B;  4M9X A;  2A9I A;  2DBD A;  4UZ0 A;  4DWN A;  2LWD A;  3CL3 A;  3MOP A;  4JQW A;  4F42 A;  1D2Z A;  1Z6T A;  1CWW A;  2DBG A;  1NGR A;  4IZ5 E;  3CRD A;  2N00 A;  2P1H A;  3MOP K;  4P4H I;  4EWI A;  2N97 A;  2YU0 A;  2LS7 A;  3EZQ A;  4O9L A;  3T6P A;  4M9S A;  1FAD A;  2L6A A;  4IZ7 B;  2G7R A;  4O7Q A;  2N83 A;  4RHW A;  3QF2 A;  2KM6 A;  2HM2 Q;  2MPC A;  2MN4 A;  2D96 A;  4D8O A;  2BBR A;  2YVI A;  3YGS P;  2DBH A;  2OF5 A;  2NZ7 A;  1C15 A;  2MS7 A;  2DBF A;  4FH0 A;  1ICH A;  4NQK A;  1E3Y A;  4M9Z A;  2OF5 H;  4I16 A;  4N1J A;  2F1S A;  2MB9 A;  1D2Z B;  2L9M A;  2M5V A;  3J63 A;  2YGS A;  3KAT A;  2NSN A;  2IB1 A;  2VGQ A;  1A1W A;  3LQQ A;  2N80 A;  1WH4 A;  3EZQ B;  1N3K A;  2YQF A;  2BBZ A;  1A1Z A;  2DO9 A;  2KN6 A;  1PN5 A;  2N1F A;  4N1K A;  1DGN A;  1YGO A;  1WXP A;  2XV9 A;  4E9M A;  4O9F A;  3LQR A;  4QOB A;  1DDF A;  4RHW E;  2GF5 A;  2MS8 A;  4P4H A;  4N1L A;  2O71 A;  3J6J A;  1WMG A;  4O6X A;  4A2Q A;  4F44 A;  4A2W A; 
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similar chains in the pdb database (?% sequence similarity)

 
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