1AF8A

Actinorhodin polyketide synthase acyl carrier protein from streptomyces coelicolor a3(2), nmr, 24 structures
Total Genus 16
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Antibiotic biosynthesis
molecule keywords ACTINORHODIN POLYKETIDE SYNTHASE ACYL CARRIER PROTEIN
publication title Solution structure of the actinorhodin polyketide synthase acyl carrier protein from Streptomyces coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
total genus 16
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 1997-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 1af8A00
2L0QA 2N6YA 2FVAA 2MR7A 2LL8A 5HVCA 1VKUA 1X3OA 2MVUA 2XZ0D 2FQ0A 2KW2A 2M5RA 1OR5A 2X2BA 1KLPA 2L22A 2KGEA 2KOQA 2KG6A 4H2XC 1HQBA 2AFEA 2KWLA 2GDWA 2K0XA 2FQ2A 2K92A 2PNGA 2LOLA 2K2QA 5CZDB 2LIUA 2N5IA 2JU2A 1AF8A 3EJBA 2XZ1C 3CE7A 2N98A 2LTEA 2FQ1A 2ROQA 1ACPA 2KOSA 2LIWA 2CG5B 2KGCA 2MD9A 3GZMA 4BPGA 2FADA 4NEOA 2CNRA 1L0HA 2KGDA 4DG9A 1NQ4A 2AFDA 3NY7B 2K0YA 4PXHB 2LPKA 2AF8A 2EHTA 1DNYA 3EJDA 5EJDA 2MR8A 2KORA 2JQ4A 2FACA 2CQ8A 4BPFA 4H2WC 2AVAA 2N5HA 2QNWA 4IZ6A 1T8KA 1DV5A 2GDXA 2L4BA 4MRTC 2MVVA 2N50A 2FAEA 2L9FA 2FVEA 3EJEA 3LMOA 2VSQA 4BPHA 2MY5A 4H2YC 4HKGA 2JU1A 2K93A 4CA3A 5KP8B 2FVFA 3GZLA 2LMLA 4R0MA 2FHSC 2KOPA 2DNWA 2CGQA 2LKIA 2KR5A 2N6ZA 2KG8A 2K94A 2MF4A 5HV8A 3RG2A 1F80D 2GDYA 2JGPA 2KGAA 1HY8A 2KOOA 5KP6B 5KP7B 4PWVB 2EHSA 2KG9A 1L0IA
chains in the Genus database with same CATH superfamily
1VKUA 1RO0A 5JPAA 2XZ0D 1FR2A 1M6NA 1E0HA 1S72P 1KLPA 1UJZA 2KGEA 1JJ2O 1VQNP 3DS3A 1KQSO 1BXIA 2JYGA 2GDWA 2K0XA 2FQ2A 2PNGA 2Z46A 2GYKA 3DS1A 5BS2A 2JU2A 1MZ8A 3EJBA 3CE7A 3CCSP 2KG9A 5BS1A 2FQ1A 2K5XA 2VLNA 3H47A 3WBHA 2MD9A 4U0DA 2FADA 3I56P 1L0HA 2CNRA 3G26A 4DG9A 1VQ6P 2BHVA 2LPKA 1IMQA 2M8PA 4GR2A 5EJDA 2MR8A 2CQ8A 1Z6MA 2OTJP 2EIAA 2QNWA 3RG6C 4IZ6A 1VQPP 1VQ9P 2KODA 3CCJP 4MRTC 3CCMP 1A8OA 3CPWO 1YIJP 3LMOA 3CCVP 4U0AA 1BAJA 2PEQA 3B5IA 2FHSC 3CC4P 5HGMA 2Z44A 2KG8A 2GZIA 3CC2P 3RG2A 1F80D 2GDYA 3B4QA 1QVGO 5KP6B 2E1MA 4PWVB 2EHSA 2L0QA 2N6YA 2FVAA 2MR7A 1IUQA 3CCRP 3Q20A 1M6EX 2M5RA 1OR5A 3LRYA 2X2BA 1YI2P 2GZGA 2L22A 4COCA 3G29A 2AFEA 2KWLA 2LOLA 1Q81Q 2JO0A 3H4EA 1D1DA 4XROA 2N5IA 1M1KQ 2KGCA 2EFJA 3OW2O 4U0CA 4NEOA 2KGDA 3U43A 2JAZA 3NY7B 1EIAA 2JB0A 4PXHB 4XFZA 2EHTA 3G6EP 1GXHA 2KORA 1VQ5P 4H2WC 1YJWP 1A43A 5DCKA 1KD1Q 2PENA 2NO8A 2MVVA 2N50A 1Q86Q 2FAEA 1K73Q 5HGLA 2FVEA 2VSQA 4BPHA 2MY5A 4H2YC 3CC7P 1W2BO 4UHPB 3MGEA 2FVFA 1YJ9P 4R0MA 3M1MA 3CCUP 2VLOA 2MF4A 3G1GA 2KGAA 1EOQA 1HY8A 2KOOA 5F2NA 1K9MQ 4WYMA 5KP7B 1IMPA 1L0IA 1NJIQ 3HZQA 3HYBA 2GZFA 5HVCA 2FQ0A 1RO2A 2KW2A 3CMEP 2XT1A 3DS5A 3E2DA 2KOQA 1RNIA 3CCLP 2KG6A 4XFXA 4PH1A 3CXCO 1HQBA 2K92A 2GZJA 3G0VA 5CZDB 2LIUA 1UNKA 1AF8A 2XZ1C 2N98A 3VRLC 1Q7YQ 3DS2A 2ROQA 1ACPA 2KOSA 2LIWA 2BUOA 3DS4A 1VQKP 2PEKA 2WPTA 4BPGA 1QRJA 2AFDA 1ZMBA 3GJNA 1GPJA 3G28A 1DNYA 3EJDA 2JQ4A 4IPYA 2FACA 2VLQA 4BPFA 2AVAA 2N5HA 3GKLC 2PEIA 5HGOA 5EW5E 1VQ8P 3G1IA 2GZEA 2L4BA 4F37A 2QA4P 4QNBA 1KC8Q 1ZNVA 3G4SP 1M74A 2EG5A 5HGNA 4CA3A 5KP8B 3GZLA 2ONTA 1EMVA 2KOPA 4PH0A 2CGQA 2DNWA 2LKIA 2M8LA 1QVFO 1E6JP 2N6ZA 2XXMA 2K94A 5HV8A 4XRQA 2JGPA 3NTEA 1CEIA 5I4TG 1AUMA 3G21A 2JYLA 3CD6P 7CEIA 1GXGA 4XFYA 3G71P 2LL8A 2CWOA 2QEXP 1M90Q 1X3OA 2MVUA 3CCQP 1VQ4P 2VLPA 4H2XC 2OTLP 4COPA 2K2QA 1YHQP 1N8RQ 2P9XA 3P05A 4M0IA 3H0DA 1VQLP 2PEJA 1YJNP 2K0DX 2LTEA 1VHNA 2CG5B 2PEMA 2Z45A 3DPHA 5F2KA 3GZMA 3DS0A 1NQ4A 2K0YA 2L6EA 2AF8A 2ERHA 1YITP 1VQOP 1T8KA 2OARA 2JBGA 1DV5A 2GDXA 2LF4A 3CCEP 1K8AQ 3CMAP 2L9FA 3EJEA 4U0EA 4HKGA 2DGYA 1K30A 2JU1A 5F2OA 2K93A 4U0FA 1AYIA 3DTJA 2LMLA 2PY8A 2KR5A 2PEOA 2M8NA 3I55P 4U0BA 2XV6A 1VQ7P 4QKOA 1Q82Q 4GR6A 1VQMP
chains in the Genus database with same CATH topology
2L0QA 2N6YA 2FVAA 2MR7A 2LL8A 5HVCA 1VKUA 1X3OA 2MVUA 2XZ0D 2FQ0A 2KW2A 2M5RA 1OR5A 2X2BA 1KLPA 2L22A 2KGEA 2KOQA 2KG6A 4H2XC 1HQBA 2AFEA 2KWLA 2GDWA 2K0XA 2FQ2A 2K92A 2PNGA 2LOLA 2K2QA 5CZDB 2LIUA 2N5IA 2JU2A 1AF8A 3EJBA 2XZ1C 3CE7A 2N98A 2LTEA 2FQ1A 2ROQA 1ACPA 2KOSA 2LIWA 2CG5B 2KGCA 2MD9A 3GZMA 4BPGA 2FADA 4NEOA 2CNRA 1L0HA 2KGDA 4DG9A 1NQ4A 2AFDA 3NY7B 2K0YA 4PXHB 2LPKA 2AF8A 2EHTA 1DNYA 3EJDA 5EJDA 2MR8A 2KORA 2JQ4A 2FACA 2CQ8A 4BPFA 4H2WC 2AVAA 2N5HA 2QNWA 4IZ6A 1T8KA 1DV5A 2GDXA 2L4BA 4MRTC 2MVVA 2N50A 2FAEA 2L9FA 2FVEA 3EJEA 3LMOA 2VSQA 4BPHA 2MY5A 4H2YC 4HKGA 2JU1A 2K93A 4CA3A 5KP8B 2FVFA 3GZLA 2LMLA 4R0MA 2FHSC 2KOPA 2DNWA 2CGQA 2LKIA 2KR5A 2N6ZA 2KG8A 2K94A 2MF4A 5HV8A 3RG2A 1F80D 2GDYA 2JGPA 2KGAA 1HY8A 2KOOA 5KP6B 5KP7B 4PWVB 2EHSA 2KG9A 1L0IA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2L0Q A;  2N6Y A;  2FVA A;  2MR7 A;  2LL8 A;  5HVC A;  1VKU A;  1X3O A;  2MVU A;  2XZ0 D;  2FQ0 A;  2KW2 A;  2M5R A;  1OR5 A;  2X2B A;  1KLP A;  2L22 A;  2KGE A;  2KOQ A;  2KG6 A;  4H2X C;  1HQB A;  2AFE A;  2KWL A;  2GDW A;  2K0X A;  2FQ2 A;  2K92 A;  2PNG A;  2LOL A;  2K2Q A;  5CZD B;  2LIU A;  2N5I A;  2JU2 A;  1AF8 A;  3EJB A;  2XZ1 C;  3CE7 A;  2N98 A;  2LTE A;  2FQ1 A;  2ROQ A;  1ACP A;  2KOS A;  2LIW A;  2CG5 B;  2KGC A;  2MD9 A;  3GZM A;  4BPG A;  2FAD A;  4NEO A;  2CNR A;  1L0H A;  2KGD A;  4DG9 A;  1NQ4 A;  2AFD A;  3NY7 B;  2K0Y A;  4PXH B;  2LPK A;  2AF8 A;  2EHT A;  1DNY A;  3EJD A;  5EJD A;  2MR8 A;  2KOR A;  2JQ4 A;  2FAC A;  2CQ8 A;  4BPF A;  4H2W C;  2AVA A;  2N5H A;  2QNW A;  4IZ6 A;  1T8K A;  1DV5 A;  2GDX A;  2L4B A;  4MRT C;  2MVV A;  2N50 A;  2FAE A;  2L9F A;  2FVE A;  3EJE A;  3LMO A;  2VSQ A;  4BPH A;  2MY5 A;  4H2Y C;  4HKG A;  2JU1 A;  2K93 A;  4CA3 A;  5KP8 B;  2FVF A;  3GZL A;  2LML A;  4R0M A;  2FHS C;  2KOP A;  2DNW A;  2CGQ A;  2LKI A;  2KR5 A;  2N6Z A;  2KG8 A;  2K94 A;  2MF4 A;  5HV8 A;  3RG2 A;  1F80 D;  2GDY A;  2JGP A;  2KGA A;  1HY8 A;  2KOO A;  5KP6 B;  5KP7 B;  4PWV B;  2EHS A;  2KG9 A;  1L0I A; 
#chains in the Genus database with same CATH topology
 1VKU A;  1RO0 A;  5JPA A;  2XZ0 D;  1FR2 A;  1M6N A;  1E0H A;  1S72 P;  1KLP A;  1UJZ A;  2KGE A;  1JJ2 O;  1VQN P;  3DS3 A;  1KQS O;  1BXI A;  2JYG A;  2GDW A;  2K0X A;  2FQ2 A;  2PNG A;  2Z46 A;  2GYK A;  3DS1 A;  5BS2 A;  2JU2 A;  1MZ8 A;  3EJB A;  3CE7 A;  3CCS P;  2KG9 A;  5BS1 A;  2FQ1 A;  2K5X A;  2VLN A;  3H47 A;  3WBH A;  2MD9 A;  4U0D A;  2FAD A;  3I56 P;  1L0H A;  2CNR A;  3G26 A;  4DG9 A;  1VQ6 P;  2BHV A;  2LPK A;  1IMQ A;  2M8P A;  4GR2 A;  5EJD A;  2MR8 A;  2CQ8 A;  1Z6M A;  2OTJ P;  2EIA A;  2QNW A;  3RG6 C;  4IZ6 A;  1VQP P;  1VQ9 P;  2KOD A;  3CCJ P;  4MRT C;  3CCM P;  1A8O A;  3CPW O;  1YIJ P;  3LMO A;  3CCV P;  4U0A A;  1BAJ A;  2PEQ A;  3B5I A;  2FHS C;  3CC4 P;  5HGM A;  2Z44 A;  2KG8 A;  2GZI A;  3CC2 P;  3RG2 A;  1F80 D;  2GDY A;  3B4Q A;  1QVG O;  5KP6 B;  2E1M A;  4PWV B;  2EHS A;  2L0Q A;  2N6Y A;  2FVA A;  2MR7 A;  1IUQ A;  3CCR P;  3Q20 A;  1M6E X;  2M5R A;  1OR5 A;  3LRY A;  2X2B A;  1YI2 P;  2GZG A;  2L22 A;  4COC A;  3G29 A;  2AFE A;  2KWL A;  2LOL A;  1Q81 Q;  2JO0 A;  3H4E A;  1D1D A;  4XRO A;  2N5I A;  1M1K Q;  2KGC A;  2EFJ A;  3OW2 O;  4U0C A;  4NEO A;  2KGD A;  3U43 A;  2JAZ A;  3NY7 B;  1EIA A;  2JB0 A;  4PXH B;  4XFZ A;  2EHT A;  3G6E P;  1GXH A;  2KOR A;  1VQ5 P;  4H2W C;  1YJW P;  1A43 A;  5DCK A;  1KD1 Q;  2PEN A;  2NO8 A;  2MVV A;  2N50 A;  1Q86 Q;  2FAE A;  1K73 Q;  5HGL A;  2FVE A;  2VSQ A;  4BPH A;  2MY5 A;  4H2Y C;  3CC7 P;  1W2B O;  4UHP B;  3MGE A;  2FVF A;  1YJ9 P;  4R0M A;  3M1M A;  3CCU P;  2VLO A;  2MF4 A;  3G1G A;  2KGA A;  1EOQ A;  1HY8 A;  2KOO A;  5F2N A;  1K9M Q;  4WYM A;  5KP7 B;  1IMP A;  1L0I A;  1NJI Q;  3HZQ A;  3HYB A;  2GZF A;  5HVC A;  2FQ0 A;  1RO2 A;  2KW2 A;  3CME P;  2XT1 A;  3DS5 A;  3E2D A;  2KOQ A;  1RNI A;  3CCL P;  2KG6 A;  4XFX A;  4PH1 A;  3CXC O;  1HQB A;  2K92 A;  2GZJ A;  3G0V A;  5CZD B;  2LIU A;  1UNK A;  1AF8 A;  2XZ1 C;  2N98 A;  3VRL C;  1Q7Y Q;  3DS2 A;  2ROQ A;  1ACP A;  2KOS A;  2LIW A;  2BUO A;  3DS4 A;  1VQK P;  2PEK A;  2WPT A;  4BPG A;  1QRJ A;  2AFD A;  1ZMB A;  3GJN A;  1GPJ A;  3G28 A;  1DNY A;  3EJD A;  2JQ4 A;  4IPY A;  2FAC A;  2VLQ A;  4BPF A;  2AVA A;  2N5H A;  3GKL C;  2PEI A;  5HGO A;  5EW5 E;  1VQ8 P;  3G1I A;  2GZE A;  2L4B A;  4F37 A;  2QA4 P;  4QNB A;  1KC8 Q;  1ZNV A;  3G4S P;  1M74 A;  2EG5 A;  5HGN A;  4CA3 A;  5KP8 B;  3GZL A;  2ONT A;  1EMV A;  2KOP A;  4PH0 A;  2CGQ A;  2DNW A;  2LKI A;  2M8L A;  1QVF O;  1E6J P;  2N6Z A;  2XXM A;  2K94 A;  5HV8 A;  4XRQ A;  2JGP A;  3NTE A;  1CEI A;  5I4T G;  1AUM A;  3G21 A;  2JYL A;  3CD6 P;  7CEI A;  1GXG A;  4XFY A;  3G71 P;  2LL8 A;  2CWO A;  2QEX P;  1M90 Q;  1X3O A;  2MVU A;  3CCQ P;  1VQ4 P;  2VLP A;  4H2X C;  2OTL P;  4COP A;  2K2Q A;  1YHQ P;  1N8R Q;  2P9X A;  3P05 A;  4M0I A;  3H0D A;  1VQL P;  2PEJ A;  1YJN P;  2K0D X;  2LTE A;  1VHN A;  2CG5 B;  2PEM A;  2Z45 A;  3DPH A;  5F2K A;  3GZM A;  3DS0 A;  1NQ4 A;  2K0Y A;  2L6E A;  2AF8 A;  2ERH A;  1YIT P;  1VQO P;  1T8K A;  2OAR A;  2JBG A;  1DV5 A;  2GDX A;  2LF4 A;  3CCE P;  1K8A Q;  3CMA P;  2L9F A;  3EJE A;  4U0E A;  4HKG A;  2DGY A;  1K30 A;  2JU1 A;  5F2O A;  2K93 A;  4U0F A;  1AYI A;  3DTJ A;  2LML A;  2PY8 A;  2KR5 A;  2PEO A;  2M8N A;  3I55 P;  4U0B A;  2XV6 A;  1VQ7 P;  4QKO A;  1Q82 Q;  4GR6 A;  1VQM P; 
#chains in the Genus database with same CATH homology
 2L0Q A;  2N6Y A;  2FVA A;  2MR7 A;  2LL8 A;  5HVC A;  1VKU A;  1X3O A;  2MVU A;  2XZ0 D;  2FQ0 A;  2KW2 A;  2M5R A;  1OR5 A;  2X2B A;  1KLP A;  2L22 A;  2KGE A;  2KOQ A;  2KG6 A;  4H2X C;  1HQB A;  2AFE A;  2KWL A;  2GDW A;  2K0X A;  2FQ2 A;  2K92 A;  2PNG A;  2LOL A;  2K2Q A;  5CZD B;  2LIU A;  2N5I A;  2JU2 A;  1AF8 A;  3EJB A;  2XZ1 C;  3CE7 A;  2N98 A;  2LTE A;  2FQ1 A;  2ROQ A;  1ACP A;  2KOS A;  2LIW A;  2CG5 B;  2KGC A;  2MD9 A;  3GZM A;  4BPG A;  2FAD A;  4NEO A;  2CNR A;  1L0H A;  2KGD A;  4DG9 A;  1NQ4 A;  2AFD A;  3NY7 B;  2K0Y A;  4PXH B;  2LPK A;  2AF8 A;  2EHT A;  1DNY A;  3EJD A;  5EJD A;  2MR8 A;  2KOR A;  2JQ4 A;  2FAC A;  2CQ8 A;  4BPF A;  4H2W C;  2AVA A;  2N5H A;  2QNW A;  4IZ6 A;  1T8K A;  1DV5 A;  2GDX A;  2L4B A;  4MRT C;  2MVV A;  2N50 A;  2FAE A;  2L9F A;  2FVE A;  3EJE A;  3LMO A;  2VSQ A;  4BPH A;  2MY5 A;  4H2Y C;  4HKG A;  2JU1 A;  2K93 A;  4CA3 A;  5KP8 B;  2FVF A;  3GZL A;  2LML A;  4R0M A;  2FHS C;  2KOP A;  2DNW A;  2CGQ A;  2LKI A;  2KR5 A;  2N6Z A;  2KG8 A;  2K94 A;  2MF4 A;  5HV8 A;  3RG2 A;  1F80 D;  2GDY A;  2JGP A;  2KGA A;  1HY8 A;  2KOO A;  5KP6 B;  5KP7 B;  4PWV B;  2EHS A;  2KG9 A;  1L0I A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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