1AJAA

Three-dimensional structure of the d153g mutant of e. coli alkaline phosphatase: a mutant with weaker magnesium binding and increased catalytic activity
Total Genus 158
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
158
Knots found
sequence length
449
structure length
435
Chain Sequence
TPEMPVLENRAAQGDITAPGGARRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQGATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAEARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Non specific mono-esterase
molecule keywords ALKALINE PHOSPHATASE
publication title Crystallographic analysis of reversible metal binding observed in a mutant (Asp153-->Gly) of Escherichia coli alkaline phosphatase.
pubmed doi rcsb
source organism Escherichia coli
total genus 158
structure length 435
sequence length 449
chains with identical sequence B
other databases KnotProt 2.0: S +31
ec nomenclature ec 3.1.3.1: Alkaline phosphatase.
pdb deposition date 1995-08-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00245 Alk_phosphatase Alkaline phosphatase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 1ajaA00
1EI6A 4KJDA 3M7VA 4LRFA 4LRCA 1HDHA 1E1ZP 1Y6VA 2GA3A 1SHQA 1E3CP 3A52A 4LR2A 4MY4A 2GSUA 5HRTA 1HJKA 1ELYA 1KHLA 1FSUA 1SHNA 5INHA 3KD8A 5L0KA 3BDFA 1KH4A 5DLWA 5KXAA 1K7HA 1ELZA 4KAYA 4LRDA 1KH5A 4UORA 3NKRA 5AJ9A 1ZEDA 4B56A 5K4PA 1EW8A 1URAA 1ZEFA 5GOVA 5LQQA 1EW2A 1ALHA 3CMRA 3TX0A 1ANIA 1ALIA 4KJGA 3MK2A 3UNYA 3SZZA 1KH9A 2IUCA 3M8WA 1EJJA 3WAYA 4NWJA 1ED9A 4UOPA 3UO0A 4CXKA 2VQRA 2W5QA 5IJQA 2D1GA 4UOOA 4FDIA 4LRBA 5LRMA 5LIAA 4ZGAA 1AJBA 3OT9A 3LXQA 3ED4A 4UPIA 2GLQA 1P49A 4CYSA 1EW9A 3TWZA 3IGYB 1E33P 3Q3QA 3IGZB 1N2LA 5LRNA 3NKQA 2IFYA 3T00A 3B5QA 1O99A 1EQJA 1KHJA 2G9YA 4CYRA 3UN5A 5EGHA 4YR1A 3UN2A 3WAVA 2GSOA 3BDGB 4TN0A 4UPLA 5EGEA 4MHXA 1KH7A 1N2KA 2X98A 1ELXA 2QZUA 3MK1A 3SZYA 3NKOA 3T01A 4ZG9A 5C66A 1E2SP 2W5RA 2ANHA 2RH6A 3E2DA 3NKMA 4ZG6A 3DYCA 4UPHA 5DLTA 2W5TA 5DLVA 5IJSA 3TG0A 3NKNA 4LR8A 1B8JA 1ALKA 3MK0A 4GTYA 1AJAA 3NVLA 4GTWA 1KHNA 3DPCA 4CXUA 1AJDA 5L0BA 4GTZA 3M8YA 4GTXA 3IDDA 1ANJA 4LR9A 1HQAA 5GRRA 1KHKA 2W5VA 3T02A 1ZEBA 4FDJA 4NWXA 4UPKA 3UN3A 2W5XA 4KAVA 1Y7AA 2W5WA 3BDHA 3BDGA 4LREA 4QAXA 1AJCA 2XRGA 2XR9A 3M8ZA 5L0EA 4KM4A 3WBHA 5TJ3A 2W5SA 2ZKTA 4LRAA 4LQYA 3WAWA 2IUCB 4LR7A 4N7TA 4ZG7A 4CXSA 4MIVA 1ED8A 3WAXA 2GSNA 1O98A 1URBA 3NKPA 1ALJA 2W8SA 2W8DA 1AUKA
chains in the Genus database with same CATH superfamily
1EI6A 4KJDA 3M7VA 4LRFA 4LRCA 1HDHA 1E1ZP 1Y6VA 2GA3A 1SHQA 1E3CP 3A52A 4LR2A 4MY4A 2GSUA 5HRTA 1HJKA 1ELYA 1KHLA 1FSUA 1SHNA 5INHA 3KD8A 5L0KA 3BDFA 1KH4A 5DLWA 5KXAA 1K7HA 1ELZA 4KAYA 4LRDA 1KH5A 4UORA 3NKRA 5AJ9A 1ZEDA 4B56A 5K4PA 1EW8A 1URAA 1ZEFA 5GOVA 5LQQA 1EW2A 1ALHA 3CMRA 3TX0A 1ANIA 1ALIA 4KJGA 3MK2A 3UNYA 3SZZA 1KH9A 2IUCA 3M8WA 1EJJA 3WAYA 4NWJA 1ED9A 4UOPA 3UO0A 4CXKA 2VQRA 2W5QA 5IJQA 2D1GA 4UOOA 4FDIA 4LRBA 5LRMA 5LIAA 4ZGAA 1AJBA 3OT9A 3LXQA 3ED4A 4UPIA 2GLQA 1P49A 4CYSA 1EW9A 3TWZA 3IGYB 1E33P 3Q3QA 3IGZB 1N2LA 5LRNA 3NKQA 2IFYA 3T00A 3B5QA 1O99A 1EQJA 1KHJA 2G9YA 4CYRA 3UN5A 5EGHA 4YR1A 3UN2A 3WAVA 2GSOA 3BDGB 4TN0A 4UPLA 5EGEA 4MHXA 1KH7A 1N2KA 2X98A 1ELXA 2QZUA 3MK1A 3SZYA 3NKOA 3T01A 4ZG9A 5C66A 1E2SP 2W5RA 2ANHA 2RH6A 3E2DA 3NKMA 4ZG6A 3DYCA 4UPHA 5DLTA 2W5TA 5DLVA 5IJSA 3TG0A 3NKNA 4LR8A 1B8JA 1ALKA 3MK0A 4GTYA 1AJAA 3NVLA 4GTWA 1KHNA 3DPCA 4CXUA 1AJDA 5L0BA 4GTZA 3M8YA 4GTXA 3IDDA 1ANJA 4LR9A 1HQAA 5GRRA 1KHKA 2W5VA 3T02A 1ZEBA 4FDJA 4NWXA 4UPKA 3UN3A 2W5XA 4KAVA 1Y7AA 2W5WA 3BDHA 3BDGA 4LREA 4QAXA 1AJCA 2XRGA 2XR9A 3M8ZA 5L0EA 4KM4A 3WBHA 5TJ3A 2W5SA 2ZKTA 4LRAA 4LQYA 3WAWA 2IUCB 4LR7A 4N7TA 4ZG7A 4CXSA 4MIVA 1ED8A 3WAXA 2GSNA 1O98A 1URBA 3NKPA 1ALJA 2W8SA 2W8DA 1AUKA
chains in the Genus database with same CATH topology
1EI6A 4KJDA 3M7VA 4LRFA 4LRCA 1HDHA 1E1ZP 1Y6VA 2GA3A 1SHQA 1E3CP 3A52A 4LR2A 4MY4A 2GSUA 5HRTA 1HJKA 1ELYA 1KHLA 1FSUA 1SHNA 5INHA 3KD8A 5L0KA 3BDFA 1KH4A 5DLWA 5KXAA 1K7HA 1ELZA 4KAYA 4LRDA 1KH5A 4UORA 3NKRA 5AJ9A 1ZEDA 4B56A 5K4PA 1EW8A 1URAA 1ZEFA 5GOVA 5LQQA 1EW2A 1ALHA 3CMRA 3TX0A 1ANIA 1ALIA 4KJGA 3MK2A 3UNYA 3SZZA 1KH9A 2IUCA 3M8WA 1EJJA 3WAYA 4NWJA 1ED9A 4UOPA 3UO0A 4CXKA 2VQRA 2W5QA 5IJQA 2D1GA 4UOOA 4FDIA 4LRBA 5LRMA 5LIAA 4ZGAA 1AJBA 3OT9A 3LXQA 3ED4A 4UPIA 2GLQA 1P49A 4CYSA 1EW9A 3TWZA 3IGYB 1E33P 3Q3QA 3IGZB 1N2LA 5LRNA 3NKQA 2IFYA 3T00A 3B5QA 1O99A 1EQJA 1KHJA 2G9YA 4CYRA 3UN5A 5EGHA 4YR1A 3UN2A 3WAVA 2GSOA 3BDGB 4TN0A 4UPLA 5EGEA 4MHXA 1KH7A 1N2KA 2X98A 1ELXA 2QZUA 3MK1A 3SZYA 3NKOA 3T01A 4ZG9A 5C66A 1E2SP 2W5RA 2ANHA 2RH6A 3E2DA 3NKMA 4ZG6A 3DYCA 4UPHA 5DLTA 2W5TA 5DLVA 5IJSA 3TG0A 3NKNA 4LR8A 1B8JA 1ALKA 3MK0A 4GTYA 1AJAA 3NVLA 4GTWA 1KHNA 3DPCA 4CXUA 1AJDA 5L0BA 4GTZA 3M8YA 4GTXA 3IDDA 1ANJA 4LR9A 1HQAA 5GRRA 1KHKA 2W5VA 3T02A 1ZEBA 4FDJA 4NWXA 4UPKA 3UN3A 2W5XA 4KAVA 1Y7AA 2W5WA 3BDHA 3BDGA 4LREA 4QAXA 1AJCA 2XRGA 2XR9A 3M8ZA 5L0EA 4KM4A 3WBHA 5TJ3A 2W5SA 2ZKTA 4LRAA 4LQYA 3WAWA 2IUCB 4LR7A 4N7TA 4ZG7A 4CXSA 4MIVA 1ED8A 3WAXA 2GSNA 1O98A 1URBA 3NKPA 1ALJA 2W8SA 2W8DA 1AUKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1EI6 A;  4KJD A;  3M7V A;  4LRF A;  4LRC A;  1HDH A;  1E1Z P;  1Y6V A;  2GA3 A;  1SHQ A;  1E3C P;  3A52 A;  4LR2 A;  4MY4 A;  2GSU A;  5HRT A;  1HJK A;  1ELY A;  1KHL A;  1FSU A;  1SHN A;  5INH A;  3KD8 A;  5L0K A;  3BDF A;  1KH4 A;  5DLW A;  5KXA A;  1K7H A;  1ELZ A;  4KAY A;  4LRD A;  1KH5 A;  4UOR A;  3NKR A;  5AJ9 A;  1ZED A;  4B56 A;  5K4P A;  1EW8 A;  1URA A;  1ZEF A;  5GOV A;  5LQQ A;  1EW2 A;  1ALH A;  3CMR A;  3TX0 A;  1ANI A;  1ALI A;  4KJG A;  3MK2 A;  3UNY A;  3SZZ A;  1KH9 A;  2IUC A;  3M8W A;  1EJJ A;  3WAY A;  4NWJ A;  1ED9 A;  4UOP A;  3UO0 A;  4CXK A;  2VQR A;  2W5Q A;  5IJQ A;  2D1G A;  4UOO A;  4FDI A;  4LRB A;  5LRM A;  5LIA A;  4ZGA A;  1AJB A;  3OT9 A;  3LXQ A;  3ED4 A;  4UPI A;  2GLQ A;  1P49 A;  4CYS A;  1EW9 A;  3TWZ A;  3IGY B;  1E33 P;  3Q3Q A;  3IGZ B;  1N2L A;  5LRN A;  3NKQ A;  2IFY A;  3T00 A;  3B5Q A;  1O99 A;  1EQJ A;  1KHJ A;  2G9Y A;  4CYR A;  3UN5 A;  5EGH A;  4YR1 A;  3UN2 A;  3WAV A;  2GSO A;  3BDG B;  4TN0 A;  4UPL A;  5EGE A;  4MHX A;  1KH7 A;  1N2K A;  2X98 A;  1ELX A;  2QZU A;  3MK1 A;  3SZY A;  3NKO A;  3T01 A;  4ZG9 A;  5C66 A;  1E2S P;  2W5R A;  2ANH A;  2RH6 A;  3E2D A;  3NKM A;  4ZG6 A;  3DYC A;  4UPH A;  5DLT A;  2W5T A;  5DLV A;  5IJS A;  3TG0 A;  3NKN A;  4LR8 A;  1B8J A;  1ALK A;  3MK0 A;  4GTY A;  1AJA A;  3NVL A;  4GTW A;  1KHN A;  3DPC A;  4CXU A;  1AJD A;  5L0B A;  4GTZ A;  3M8Y A;  4GTX A;  3IDD A;  1ANJ A;  4LR9 A;  1HQA A;  5GRR A;  1KHK A;  2W5V A;  3T02 A;  1ZEB A;  4FDJ A;  4NWX A;  4UPK A;  3UN3 A;  2W5X A;  4KAV A;  1Y7A A;  2W5W A;  3BDH A;  3BDG A;  4LRE A;  4QAX A;  1AJC A;  2XRG A;  2XR9 A;  3M8Z A;  5L0E A;  4KM4 A;  3WBH A;  5TJ3 A;  2W5S A;  2ZKT A;  4LRA A;  4LQY A;  3WAW A;  2IUC B;  4LR7 A;  4N7T A;  4ZG7 A;  4CXS A;  4MIV A;  1ED8 A;  3WAX A;  2GSN A;  1O98 A;  1URB A;  3NKP A;  1ALJ A;  2W8S A;  2W8D A;  1AUK A; 
#chains in the Genus database with same CATH topology
 1EI6 A;  4KJD A;  3M7V A;  4LRF A;  4LRC A;  1HDH A;  1E1Z P;  1Y6V A;  2GA3 A;  1SHQ A;  1E3C P;  3A52 A;  4LR2 A;  4MY4 A;  2GSU A;  5HRT A;  1HJK A;  1ELY A;  1KHL A;  1FSU A;  1SHN A;  5INH A;  3KD8 A;  5L0K A;  3BDF A;  1KH4 A;  5DLW A;  5KXA A;  1K7H A;  1ELZ A;  4KAY A;  4LRD A;  1KH5 A;  4UOR A;  3NKR A;  5AJ9 A;  1ZED A;  4B56 A;  5K4P A;  1EW8 A;  1URA A;  1ZEF A;  5GOV A;  5LQQ A;  1EW2 A;  1ALH A;  3CMR A;  3TX0 A;  1ANI A;  1ALI A;  4KJG A;  3MK2 A;  3UNY A;  3SZZ A;  1KH9 A;  2IUC A;  3M8W A;  1EJJ A;  3WAY A;  4NWJ A;  1ED9 A;  4UOP A;  3UO0 A;  4CXK A;  2VQR A;  2W5Q A;  5IJQ A;  2D1G A;  4UOO A;  4FDI A;  4LRB A;  5LRM A;  5LIA A;  4ZGA A;  1AJB A;  3OT9 A;  3LXQ A;  3ED4 A;  4UPI A;  2GLQ A;  1P49 A;  4CYS A;  1EW9 A;  3TWZ A;  3IGY B;  1E33 P;  3Q3Q A;  3IGZ B;  1N2L A;  5LRN A;  3NKQ A;  2IFY A;  3T00 A;  3B5Q A;  1O99 A;  1EQJ A;  1KHJ A;  2G9Y A;  4CYR A;  3UN5 A;  5EGH A;  4YR1 A;  3UN2 A;  3WAV A;  2GSO A;  3BDG B;  4TN0 A;  4UPL A;  5EGE A;  4MHX A;  1KH7 A;  1N2K A;  2X98 A;  1ELX A;  2QZU A;  3MK1 A;  3SZY A;  3NKO A;  3T01 A;  4ZG9 A;  5C66 A;  1E2S P;  2W5R A;  2ANH A;  2RH6 A;  3E2D A;  3NKM A;  4ZG6 A;  3DYC A;  4UPH A;  5DLT A;  2W5T A;  5DLV A;  5IJS A;  3TG0 A;  3NKN A;  4LR8 A;  1B8J A;  1ALK A;  3MK0 A;  4GTY A;  1AJA A;  3NVL A;  4GTW A;  1KHN A;  3DPC A;  4CXU A;  1AJD A;  5L0B A;  4GTZ A;  3M8Y A;  4GTX A;  3IDD A;  1ANJ A;  4LR9 A;  1HQA A;  5GRR A;  1KHK A;  2W5V A;  3T02 A;  1ZEB A;  4FDJ A;  4NWX A;  4UPK A;  3UN3 A;  2W5X A;  4KAV A;  1Y7A A;  2W5W A;  3BDH A;  3BDG A;  4LRE A;  4QAX A;  1AJC A;  2XRG A;  2XR9 A;  3M8Z A;  5L0E A;  4KM4 A;  3WBH A;  5TJ3 A;  2W5S A;  2ZKT A;  4LRA A;  4LQY A;  3WAW A;  2IUC B;  4LR7 A;  4N7T A;  4ZG7 A;  4CXS A;  4MIV A;  1ED8 A;  3WAX A;  2GSN A;  1O98 A;  1URB A;  3NKP A;  1ALJ A;  2W8S A;  2W8D A;  1AUK A; 
#chains in the Genus database with same CATH homology
 1EI6 A;  4KJD A;  3M7V A;  4LRF A;  4LRC A;  1HDH A;  1E1Z P;  1Y6V A;  2GA3 A;  1SHQ A;  1E3C P;  3A52 A;  4LR2 A;  4MY4 A;  2GSU A;  5HRT A;  1HJK A;  1ELY A;  1KHL A;  1FSU A;  1SHN A;  5INH A;  3KD8 A;  5L0K A;  3BDF A;  1KH4 A;  5DLW A;  5KXA A;  1K7H A;  1ELZ A;  4KAY A;  4LRD A;  1KH5 A;  4UOR A;  3NKR A;  5AJ9 A;  1ZED A;  4B56 A;  5K4P A;  1EW8 A;  1URA A;  1ZEF A;  5GOV A;  5LQQ A;  1EW2 A;  1ALH A;  3CMR A;  3TX0 A;  1ANI A;  1ALI A;  4KJG A;  3MK2 A;  3UNY A;  3SZZ A;  1KH9 A;  2IUC A;  3M8W A;  1EJJ A;  3WAY A;  4NWJ A;  1ED9 A;  4UOP A;  3UO0 A;  4CXK A;  2VQR A;  2W5Q A;  5IJQ A;  2D1G A;  4UOO A;  4FDI A;  4LRB A;  5LRM A;  5LIA A;  4ZGA A;  1AJB A;  3OT9 A;  3LXQ A;  3ED4 A;  4UPI A;  2GLQ A;  1P49 A;  4CYS A;  1EW9 A;  3TWZ A;  3IGY B;  1E33 P;  3Q3Q A;  3IGZ B;  1N2L A;  5LRN A;  3NKQ A;  2IFY A;  3T00 A;  3B5Q A;  1O99 A;  1EQJ A;  1KHJ A;  2G9Y A;  4CYR A;  3UN5 A;  5EGH A;  4YR1 A;  3UN2 A;  3WAV A;  2GSO A;  3BDG B;  4TN0 A;  4UPL A;  5EGE A;  4MHX A;  1KH7 A;  1N2K A;  2X98 A;  1ELX A;  2QZU A;  3MK1 A;  3SZY A;  3NKO A;  3T01 A;  4ZG9 A;  5C66 A;  1E2S P;  2W5R A;  2ANH A;  2RH6 A;  3E2D A;  3NKM A;  4ZG6 A;  3DYC A;  4UPH A;  5DLT A;  2W5T A;  5DLV A;  5IJS A;  3TG0 A;  3NKN A;  4LR8 A;  1B8J A;  1ALK A;  3MK0 A;  4GTY A;  1AJA A;  3NVL A;  4GTW A;  1KHN A;  3DPC A;  4CXU A;  1AJD A;  5L0B A;  4GTZ A;  3M8Y A;  4GTX A;  3IDD A;  1ANJ A;  4LR9 A;  1HQA A;  5GRR A;  1KHK A;  2W5V A;  3T02 A;  1ZEB A;  4FDJ A;  4NWX A;  4UPK A;  3UN3 A;  2W5X A;  4KAV A;  1Y7A A;  2W5W A;  3BDH A;  3BDG A;  4LRE A;  4QAX A;  1AJC A;  2XRG A;  2XR9 A;  3M8Z A;  5L0E A;  4KM4 A;  3WBH A;  5TJ3 A;  2W5S A;  2ZKT A;  4LRA A;  4LQY A;  3WAW A;  2IUC B;  4LR7 A;  4N7T A;  4ZG7 A;  4CXS A;  4MIV A;  1ED8 A;  3WAX A;  2GSN A;  1O98 A;  1URB A;  3NKP A;  1ALJ A;  2W8S A;  2W8D A;  1AUK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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