1AJBA

Three-dimensional structure of the d153g mutant of e. coli alkaline phosphatase: a mutant with weaker magnesium binding and increased catalytic activity
Total Genus 162
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
162
Knots found
sequence length
449
structure length
449
Chain Sequence
TPEMPVLENRAAQGDITAPGGARRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQGATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAEARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Non specific mono-esterase
molecule keywords ALKALINE PHOSPHATASE
publication title 3-D structure of the D153G mutant of Escherichia coli alkaline phosphatase: an enzyme with weaker magnesium binding and increased catalytic activity.
pubmed doi rcsb
source organism Escherichia coli
total genus 162
structure length 449
sequence length 449
chains with identical sequence B
other databases KnotProt 2.0: S +31
ec nomenclature ec 3.1.3.1: Alkaline phosphatase.
pdb deposition date 1995-08-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00245 Alk_phosphatase Alkaline phosphatase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 1ajbA00
4KJDA 3DPCA 4ZGAA 3BDFA 5L0BA 4CXKA 4FDIA 3T00A 5GOVA 2W5WA 5C66A 3M7VA 1E1ZP 1N2LA 2RH6A 3Q3QA 1URAA 1ZEBA 3NKPA 3NKQA 4GTZA 4QAXA 1ALHA 2W5VA 4NWJA 5L0KA 5DLWA 3NKNA 4UOPA 1EW2A 5LRMA 4CXSA 4UOOA 3NKRA 3A52A 3NKOA 4LR2A 4LREA 1AJDA 4FDJA 4GTYA 1URBA 5DLTA 1SHQA 5K4PA 1O99A 1HDHA 3SZYA 4UPLA 3E2DA 3TG0A 1Y7AA 3WAVA 1AUKA 4LQYA 5GRRA 4KAYA 3BDHA 1HJKA 3UN2A 3WAXA 3IDDA 2GA3A 1ZEFA 2W5TA 5HRTA 2ANHA 1ELXA 3IGZB 1EW8A 1E33P 1HQAA 3M8YA 1EJJA 4LRBA 3KD8A 3NVLA 4LRDA 5EGEA 1ED8A 5EGHA 5LRNA 2GLQA 2VQRA 3B5QA 4N7TA 1KHKA 4TN0A 3SZZA 1AJAA 3UO0A 4ZG6A 3LXQA 2GSOA 2W8DA 3MK0A 1ANIA 5INHA 1E3CP 1FSUA 2D1GA 4CXUA 5IJQA 5L0EA 2QZUA 4GTXA 1KHJA 4UPIA 1K7HA 1EW9A 4LR9A 2XR9A 4B56A 4LRCA 3M8ZA 4ZG7A 1B8JA 2W5XA 3T02A 2ZKTA 1P49A 1Y6VA 3UN5A 3DYCA 4LR7A 5TJ3A 4UPHA 2XRGA 4MHXA 1KH9A 1N2KA 1ELYA 4CYRA 1ANJA 1ELZA 1KH4A 1ZEDA 2X98A 5AJ9A 5KXAA 4MY4A 1ALJA 2W5QA 3OT9A 4LRFA 5IJSA 3UNYA 5DLVA 3ED4A 4KM4A 1EI6A 3CMRA 4LRAA 4UPKA 3WAYA 3M8WA 3TX0A 4KJGA 1ALKA 1AJBA 3NKMA 2W8SA 1E2SP 1AJCA 3BDGA 2IUCA 3BDGB 2IUCB 2G9YA 4GTWA 1KHLA 2W5SA 5LIAA 4MIVA 4CYSA 2GSNA 4UORA 3MK2A 3TWZA 5LQQA 1ALIA 4YR1A 1KH7A 4KAVA 1EQJA 1ED9A 3UN3A 2GSUA 3WAWA 4ZG9A 1O98A 3MK1A 2W5RA 1KHNA 1SHNA 3IGYB 3T01A 3WBHA 1KH5A 4NWXA 4LR8A 2IFYA
chains in the Genus database with same CATH superfamily
4KJDA 3DPCA 4ZGAA 3BDFA 5L0BA 4CXKA 4FDIA 3T00A 5GOVA 2W5WA 5C66A 3M7VA 1E1ZP 1N2LA 2RH6A 3Q3QA 1URAA 1ZEBA 3NKPA 3NKQA 4GTZA 4QAXA 1ALHA 2W5VA 4NWJA 5L0KA 5DLWA 3NKNA 4UOPA 1EW2A 5LRMA 4CXSA 4UOOA 3NKRA 3A52A 3NKOA 4LR2A 4LREA 1AJDA 4FDJA 4GTYA 1URBA 5DLTA 1SHQA 5K4PA 1O99A 1HDHA 3SZYA 4UPLA 3E2DA 3TG0A 1Y7AA 3WAVA 1AUKA 4LQYA 5GRRA 4KAYA 3BDHA 1HJKA 3UN2A 3WAXA 3IDDA 2GA3A 1ZEFA 2W5TA 5HRTA 2ANHA 1ELXA 3IGZB 1EW8A 1E33P 1HQAA 3M8YA 1EJJA 4LRBA 3KD8A 3NVLA 4LRDA 5EGEA 1ED8A 5EGHA 5LRNA 2GLQA 2VQRA 3B5QA 4N7TA 1KHKA 4TN0A 3SZZA 1AJAA 3UO0A 4ZG6A 3LXQA 2GSOA 2W8DA 3MK0A 1ANIA 5INHA 1E3CP 1FSUA 2D1GA 4CXUA 5IJQA 5L0EA 2QZUA 4GTXA 1KHJA 4UPIA 1K7HA 1EW9A 4LR9A 2XR9A 4B56A 4LRCA 3M8ZA 4ZG7A 1B8JA 2W5XA 3T02A 2ZKTA 1P49A 1Y6VA 3UN5A 3DYCA 4LR7A 5TJ3A 4UPHA 2XRGA 4MHXA 1KH9A 1N2KA 1ELYA 4CYRA 1ANJA 1ELZA 1KH4A 1ZEDA 2X98A 5AJ9A 5KXAA 4MY4A 1ALJA 2W5QA 3OT9A 4LRFA 5IJSA 3UNYA 5DLVA 3ED4A 4KM4A 1EI6A 3CMRA 4LRAA 4UPKA 3WAYA 3M8WA 3TX0A 4KJGA 1ALKA 1AJBA 3NKMA 2W8SA 1E2SP 1AJCA 3BDGA 2IUCA 3BDGB 2IUCB 2G9YA 4GTWA 1KHLA 2W5SA 5LIAA 4MIVA 4CYSA 2GSNA 4UORA 3MK2A 3TWZA 5LQQA 1ALIA 4YR1A 1KH7A 4KAVA 1EQJA 1ED9A 3UN3A 2GSUA 3WAWA 4ZG9A 1O98A 3MK1A 2W5RA 1KHNA 1SHNA 3IGYB 3T01A 3WBHA 1KH5A 4NWXA 4LR8A 2IFYA
chains in the Genus database with same CATH topology
4KJDA 3DPCA 4ZGAA 3BDFA 5L0BA 4CXKA 4FDIA 3T00A 5GOVA 2W5WA 5C66A 3M7VA 1E1ZP 1N2LA 2RH6A 3Q3QA 1URAA 1ZEBA 3NKPA 3NKQA 4GTZA 4QAXA 1ALHA 2W5VA 4NWJA 5L0KA 5DLWA 3NKNA 4UOPA 1EW2A 5LRMA 4CXSA 4UOOA 3NKRA 3A52A 3NKOA 4LR2A 4LREA 1AJDA 4FDJA 4GTYA 1URBA 5DLTA 1SHQA 5K4PA 1O99A 1HDHA 3SZYA 4UPLA 3E2DA 3TG0A 1Y7AA 3WAVA 1AUKA 4LQYA 5GRRA 4KAYA 3BDHA 1HJKA 3UN2A 3WAXA 3IDDA 2GA3A 1ZEFA 2W5TA 5HRTA 2ANHA 1ELXA 3IGZB 1EW8A 1E33P 1HQAA 3M8YA 1EJJA 4LRBA 3KD8A 3NVLA 4LRDA 5EGEA 1ED8A 5EGHA 5LRNA 2GLQA 2VQRA 3B5QA 4N7TA 1KHKA 4TN0A 3SZZA 1AJAA 3UO0A 4ZG6A 3LXQA 2GSOA 2W8DA 3MK0A 1ANIA 5INHA 1E3CP 1FSUA 2D1GA 4CXUA 5IJQA 5L0EA 2QZUA 4GTXA 1KHJA 4UPIA 1K7HA 1EW9A 4LR9A 2XR9A 4B56A 4LRCA 3M8ZA 4ZG7A 1B8JA 2W5XA 3T02A 2ZKTA 1P49A 1Y6VA 3UN5A 3DYCA 4LR7A 5TJ3A 4UPHA 2XRGA 4MHXA 1KH9A 1N2KA 1ELYA 4CYRA 1ANJA 1ELZA 1KH4A 1ZEDA 2X98A 5AJ9A 5KXAA 4MY4A 1ALJA 2W5QA 3OT9A 4LRFA 5IJSA 3UNYA 5DLVA 3ED4A 4KM4A 1EI6A 3CMRA 4LRAA 4UPKA 3WAYA 3M8WA 3TX0A 4KJGA 1ALKA 1AJBA 3NKMA 2W8SA 1E2SP 1AJCA 3BDGA 2IUCA 3BDGB 2IUCB 2G9YA 4GTWA 1KHLA 2W5SA 5LIAA 4MIVA 4CYSA 2GSNA 4UORA 3MK2A 3TWZA 5LQQA 1ALIA 4YR1A 1KH7A 4KAVA 1EQJA 1ED9A 3UN3A 2GSUA 3WAWA 4ZG9A 1O98A 3MK1A 2W5RA 1KHNA 1SHNA 3IGYB 3T01A 3WBHA 1KH5A 4NWXA 4LR8A 2IFYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4KJD A;  3DPC A;  4ZGA A;  3BDF A;  5L0B A;  4CXK A;  4FDI A;  3T00 A;  5GOV A;  2W5W A;  5C66 A;  3M7V A;  1E1Z P;  1N2L A;  2RH6 A;  3Q3Q A;  1URA A;  1ZEB A;  3NKP A;  3NKQ A;  4GTZ A;  4QAX A;  1ALH A;  2W5V A;  4NWJ A;  5L0K A;  5DLW A;  3NKN A;  4UOP A;  1EW2 A;  5LRM A;  4CXS A;  4UOO A;  3NKR A;  3A52 A;  3NKO A;  4LR2 A;  4LRE A;  1AJD A;  4FDJ A;  4GTY A;  1URB A;  5DLT A;  1SHQ A;  5K4P A;  1O99 A;  1HDH A;  3SZY A;  4UPL A;  3E2D A;  3TG0 A;  1Y7A A;  3WAV A;  1AUK A;  4LQY A;  5GRR A;  4KAY A;  3BDH A;  1HJK A;  3UN2 A;  3WAX A;  3IDD A;  2GA3 A;  1ZEF A;  2W5T A;  5HRT A;  2ANH A;  1ELX A;  3IGZ B;  1EW8 A;  1E33 P;  1HQA A;  3M8Y A;  1EJJ A;  4LRB A;  3KD8 A;  3NVL A;  4LRD A;  5EGE A;  1ED8 A;  5EGH A;  5LRN A;  2GLQ A;  2VQR A;  3B5Q A;  4N7T A;  1KHK A;  4TN0 A;  3SZZ A;  1AJA A;  3UO0 A;  4ZG6 A;  3LXQ A;  2GSO A;  2W8D A;  3MK0 A;  1ANI A;  5INH A;  1E3C P;  1FSU A;  2D1G A;  4CXU A;  5IJQ A;  5L0E A;  2QZU A;  4GTX A;  1KHJ A;  4UPI A;  1K7H A;  1EW9 A;  4LR9 A;  2XR9 A;  4B56 A;  4LRC A;  3M8Z A;  4ZG7 A;  1B8J A;  2W5X A;  3T02 A;  2ZKT A;  1P49 A;  1Y6V A;  3UN5 A;  3DYC A;  4LR7 A;  5TJ3 A;  4UPH A;  2XRG A;  4MHX A;  1KH9 A;  1N2K A;  1ELY A;  4CYR A;  1ANJ A;  1ELZ A;  1KH4 A;  1ZED A;  2X98 A;  5AJ9 A;  5KXA A;  4MY4 A;  1ALJ A;  2W5Q A;  3OT9 A;  4LRF A;  5IJS A;  3UNY A;  5DLV A;  3ED4 A;  4KM4 A;  1EI6 A;  3CMR A;  4LRA A;  4UPK A;  3WAY A;  3M8W A;  3TX0 A;  4KJG A;  1ALK A;  1AJB A;  3NKM A;  2W8S A;  1E2S P;  1AJC A;  3BDG A;  2IUC A;  3BDG B;  2IUC B;  2G9Y A;  4GTW A;  1KHL A;  2W5S A;  5LIA A;  4MIV A;  4CYS A;  2GSN A;  4UOR A;  3MK2 A;  3TWZ A;  5LQQ A;  1ALI A;  4YR1 A;  1KH7 A;  4KAV A;  1EQJ A;  1ED9 A;  3UN3 A;  2GSU A;  3WAW A;  4ZG9 A;  1O98 A;  3MK1 A;  2W5R A;  1KHN A;  1SHN A;  3IGY B;  3T01 A;  3WBH A;  1KH5 A;  4NWX A;  4LR8 A;  2IFY A; 
#chains in the Genus database with same CATH topology
 4KJD A;  3DPC A;  4ZGA A;  3BDF A;  5L0B A;  4CXK A;  4FDI A;  3T00 A;  5GOV A;  2W5W A;  5C66 A;  3M7V A;  1E1Z P;  1N2L A;  2RH6 A;  3Q3Q A;  1URA A;  1ZEB A;  3NKP A;  3NKQ A;  4GTZ A;  4QAX A;  1ALH A;  2W5V A;  4NWJ A;  5L0K A;  5DLW A;  3NKN A;  4UOP A;  1EW2 A;  5LRM A;  4CXS A;  4UOO A;  3NKR A;  3A52 A;  3NKO A;  4LR2 A;  4LRE A;  1AJD A;  4FDJ A;  4GTY A;  1URB A;  5DLT A;  1SHQ A;  5K4P A;  1O99 A;  1HDH A;  3SZY A;  4UPL A;  3E2D A;  3TG0 A;  1Y7A A;  3WAV A;  1AUK A;  4LQY A;  5GRR A;  4KAY A;  3BDH A;  1HJK A;  3UN2 A;  3WAX A;  3IDD A;  2GA3 A;  1ZEF A;  2W5T A;  5HRT A;  2ANH A;  1ELX A;  3IGZ B;  1EW8 A;  1E33 P;  1HQA A;  3M8Y A;  1EJJ A;  4LRB A;  3KD8 A;  3NVL A;  4LRD A;  5EGE A;  1ED8 A;  5EGH A;  5LRN A;  2GLQ A;  2VQR A;  3B5Q A;  4N7T A;  1KHK A;  4TN0 A;  3SZZ A;  1AJA A;  3UO0 A;  4ZG6 A;  3LXQ A;  2GSO A;  2W8D A;  3MK0 A;  1ANI A;  5INH A;  1E3C P;  1FSU A;  2D1G A;  4CXU A;  5IJQ A;  5L0E A;  2QZU A;  4GTX A;  1KHJ A;  4UPI A;  1K7H A;  1EW9 A;  4LR9 A;  2XR9 A;  4B56 A;  4LRC A;  3M8Z A;  4ZG7 A;  1B8J A;  2W5X A;  3T02 A;  2ZKT A;  1P49 A;  1Y6V A;  3UN5 A;  3DYC A;  4LR7 A;  5TJ3 A;  4UPH A;  2XRG A;  4MHX A;  1KH9 A;  1N2K A;  1ELY A;  4CYR A;  1ANJ A;  1ELZ A;  1KH4 A;  1ZED A;  2X98 A;  5AJ9 A;  5KXA A;  4MY4 A;  1ALJ A;  2W5Q A;  3OT9 A;  4LRF A;  5IJS A;  3UNY A;  5DLV A;  3ED4 A;  4KM4 A;  1EI6 A;  3CMR A;  4LRA A;  4UPK A;  3WAY A;  3M8W A;  3TX0 A;  4KJG A;  1ALK A;  1AJB A;  3NKM A;  2W8S A;  1E2S P;  1AJC A;  3BDG A;  2IUC A;  3BDG B;  2IUC B;  2G9Y A;  4GTW A;  1KHL A;  2W5S A;  5LIA A;  4MIV A;  4CYS A;  2GSN A;  4UOR A;  3MK2 A;  3TWZ A;  5LQQ A;  1ALI A;  4YR1 A;  1KH7 A;  4KAV A;  1EQJ A;  1ED9 A;  3UN3 A;  2GSU A;  3WAW A;  4ZG9 A;  1O98 A;  3MK1 A;  2W5R A;  1KHN A;  1SHN A;  3IGY B;  3T01 A;  3WBH A;  1KH5 A;  4NWX A;  4LR8 A;  2IFY A; 
#chains in the Genus database with same CATH homology
 4KJD A;  3DPC A;  4ZGA A;  3BDF A;  5L0B A;  4CXK A;  4FDI A;  3T00 A;  5GOV A;  2W5W A;  5C66 A;  3M7V A;  1E1Z P;  1N2L A;  2RH6 A;  3Q3Q A;  1URA A;  1ZEB A;  3NKP A;  3NKQ A;  4GTZ A;  4QAX A;  1ALH A;  2W5V A;  4NWJ A;  5L0K A;  5DLW A;  3NKN A;  4UOP A;  1EW2 A;  5LRM A;  4CXS A;  4UOO A;  3NKR A;  3A52 A;  3NKO A;  4LR2 A;  4LRE A;  1AJD A;  4FDJ A;  4GTY A;  1URB A;  5DLT A;  1SHQ A;  5K4P A;  1O99 A;  1HDH A;  3SZY A;  4UPL A;  3E2D A;  3TG0 A;  1Y7A A;  3WAV A;  1AUK A;  4LQY A;  5GRR A;  4KAY A;  3BDH A;  1HJK A;  3UN2 A;  3WAX A;  3IDD A;  2GA3 A;  1ZEF A;  2W5T A;  5HRT A;  2ANH A;  1ELX A;  3IGZ B;  1EW8 A;  1E33 P;  1HQA A;  3M8Y A;  1EJJ A;  4LRB A;  3KD8 A;  3NVL A;  4LRD A;  5EGE A;  1ED8 A;  5EGH A;  5LRN A;  2GLQ A;  2VQR A;  3B5Q A;  4N7T A;  1KHK A;  4TN0 A;  3SZZ A;  1AJA A;  3UO0 A;  4ZG6 A;  3LXQ A;  2GSO A;  2W8D A;  3MK0 A;  1ANI A;  5INH A;  1E3C P;  1FSU A;  2D1G A;  4CXU A;  5IJQ A;  5L0E A;  2QZU A;  4GTX A;  1KHJ A;  4UPI A;  1K7H A;  1EW9 A;  4LR9 A;  2XR9 A;  4B56 A;  4LRC A;  3M8Z A;  4ZG7 A;  1B8J A;  2W5X A;  3T02 A;  2ZKT A;  1P49 A;  1Y6V A;  3UN5 A;  3DYC A;  4LR7 A;  5TJ3 A;  4UPH A;  2XRG A;  4MHX A;  1KH9 A;  1N2K A;  1ELY A;  4CYR A;  1ANJ A;  1ELZ A;  1KH4 A;  1ZED A;  2X98 A;  5AJ9 A;  5KXA A;  4MY4 A;  1ALJ A;  2W5Q A;  3OT9 A;  4LRF A;  5IJS A;  3UNY A;  5DLV A;  3ED4 A;  4KM4 A;  1EI6 A;  3CMR A;  4LRA A;  4UPK A;  3WAY A;  3M8W A;  3TX0 A;  4KJG A;  1ALK A;  1AJB A;  3NKM A;  2W8S A;  1E2S P;  1AJC A;  3BDG A;  2IUC A;  3BDG B;  2IUC B;  2G9Y A;  4GTW A;  1KHL A;  2W5S A;  5LIA A;  4MIV A;  4CYS A;  2GSN A;  4UOR A;  3MK2 A;  3TWZ A;  5LQQ A;  1ALI A;  4YR1 A;  1KH7 A;  4KAV A;  1EQJ A;  1ED9 A;  3UN3 A;  2GSU A;  3WAW A;  4ZG9 A;  1O98 A;  3MK1 A;  2W5R A;  1KHN A;  1SHN A;  3IGY B;  3T01 A;  3WBH A;  1KH5 A;  4NWX A;  4LR8 A;  2IFY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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