1DCOA

Dcoh, a bifunctional protein-binding transcriptional coactivator
Total Genus 31
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
31
sequence length
99
structure length
99
Chain Sequence
HRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcriptional stimulator
molecule keywords DCOH
publication title High-resolution structures of the bifunctional enzyme and transcriptional coactivator DCoH and its complex with a product analogue.
pubmed rcsb
source organism Rattus norvegicus
total genus 31
structure length 99
sequence length 99
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature ec 4.2.1.96: 4a-hydroxytetrahydrobiopterin dehydratase.
pdb deposition date 1996-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01329 Pterin_4a Pterin 4 alpha carbinolamine dehydratase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1360.20 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 Transcriptional coactivator/pterin dehydratase 1dcoA00
1DCOA 3HXAA 1DCHA 1USMA 2EBBA 4C45A 2V6SA 2V6UA 4WILA 2V6TA 3JSTA 1USOA 1RU0A 4LOWA 1F93A 1DCPA
chains in the Genus database with same CATH superfamily
1Y1WA 4QJVA 2FQTA 2GSOA 3H0GK 3S14K 2YU9A 3TFJA 3HOYK 1R9TK 3T02A 3S1NC 3FOFA 4GTCA 3N3YA 3FKIA 3GTGA 3RZOC 1IS1A 3HOXC 4O2DA 1F7UA 1SMYA 4XSXA 2Y0SD 3A8IA 1INNA 5C3EC 3GTLC 4G0VA 1IQ0A 5FLMK 3BP3A 1ZXOA 2E2IA 1YNNA 3S14C 1K83A 3GTPK 3V4GA 3S16K 4C3JK 3HOZC 4KB4A 2NVTC 1KQ4A 1G51A 4GTFA 4A3BC 1WOPA 2JA6K 4A3JK 3GTOC 2WB1D 2WAQD 1BS2A 4AH6A 1I50A 4A3FC 1HI9A 4WJ3M 1AB4A 1V5VA 4GTLA 5IYCK 2R93C 4X6AK 4BY1K 2PHCB 1BJTA 1Y1WK 3S16C 1ZBSA 3S2DC 5M3FK 2YU9K 4G0WA 4A93C 2A69A 2NVQK 3GTMC 4KM9A 3H3VL 4KM8A 2NVXK 5JFEA 2P8TA 3S1QC 3AH5A 1O25A 4G0UA 3HXAA 3FKIK 4YFXA 4A3KK 3GTGK 2R93A 2VUMK 4OIPA 1PJ6A 2O5JA 3S1MK 1WQGA 1O2BA 2PPBA 1EFWA 4KMDA 4GFQA 3GTQA 5E68A 2A68A 4C3HC 4KC6A 4X6AC 4BY1C 2JA7C 3GTMA 4YFNA 3I4MC 1TWHC 5TMCA 1Y1WC 2E2IK 3M3YC 4A3LC 1Y1VC 4NOIA 1WCMC 1XZPB 4GTEA 3S1NK 1O2FB 2CFAB 1WQFA 3K7AC 4BY7C 1J6VA 1WORA 3RZOK 4A3CC 1VGXA 5C4XC 1EK8A 4OIQA 3IPJA 4BBSC 5C3EK 3GEIA 3N0BA 3GTLK 3GTGC 1XXAA 5L46A 1F93A 5HL8A 5IP9C 1XZPA 3HOVC 2JA7A 1TWHA 2PA8D 1YNJA 1Y1VA 1UV7A 1I50K 4G7ZA 2R92A 1WCMA 3MMLB 2GAHC 4MEXA 3GTJA 1PJ7A 1WIHA 3GTKC 2B63A 3S0XA 4KATA 3HOZK 4KN4A 3CQZA 4GTDA 4LK1A 2PMZL 5CJ9A 2E2IC 2O5IA 3OPFA 2NVTK 4C3IC 1VLOA 3G4AA 3PO3C 1K83C 4LOWA 4A3BK 3HKZD 3GTOK 3HOWK 1TWGA 4A3FK 1I6HC 3HOUC 1YX2A 2W7VA 4LLGA 2V6SA 1GE9A 4M1XA 1DCOA 3GTKA 1VJEA 4AYBD 2V6UA 3TFHA 2R93K 1I50C 4A3EC 4XLPA 1IL2A 5IOSA 3S2DK 2JH3A 4WJ4A 4A3GC 4A93K 1VH2A 3GTMK 5M5YK 2GAGC 1DCHA 2PA8L 2EBBA 4YFKA 3FHZA 3S1QK 2NVYC 4BKWA 3HOWC 2ZUFA 5TJ3A 3AD9C 4XSZA 1BGWA 1DD5A 2ZUEA 3QX3A 4QIWD 4ILDA 4BLAA 1WQHA 1HQMA 1I3QC 3ERED 1TWAA 3LPXA 4C3HK 4A3DK 4GT9A 1ZVUA 2JA7K 1J6XA 4BXXC 5M5WK 4WILA 3I4MK 1TWHK 5IP7K 3M3YK 1J6WA 4A3LK 1Y1VK 1XPPA 1L0WA 1WCMK 3GTQC 2NVYA 4KB2A 2Y0SL 3WODA 3K7AK 4BY7K 4PABA 2V6TA 4KARA 2E2HC 3GTJK 4A3CK 1WOOA 2B63K 5D4DA 4LK0A 3S15K 5C4XK 5EGHA 1DCPA 1O2AA 4BBSK 1I3QA 3S17C 5M3MK 4RMFA 5EGEA 3BUEA 3GEEA 4LJZA 4PAAA 2JA5C 5IP9K 2GSUA 3HOVK 1TWGK 1O26A 2XCOA 3L4JA 3CAGA 2E2HA 3T00A 3I4NK 4A3DC 4C2MC 2A6EA 3GTKK 1ZYRA 4A3IC 2WB1L 2WAQL 5IP7C 3AD7C 4C3IK 1JQWA 2R92C 3PO3K 5C4JC 1K83K 3RZDC 2D6FC 3GTJC 4G7OA 2JA5A 2B63C 1VRQC 3AQOA 3CQZC 3S15C 1SFOA 5CHPA 1I6HK 3HOUK 3NUHA 1EI6A 5TMFA 3GEHA 4Y7NC 2CFAA 5M5XK 2JA6A 1TWGC 3SZYA 1C0AA 1IW7A 4A3EK 5C44K 4GZYA 4QJVB 3I4NC 4KMHA 3EQLA 1F9NA 2FQOA 4XCHA 5IORA 4A3GK 5IOQA 3S1RC 4KMAA 1F7VA 2NVYK 1J98A 5IYBK 1TWFA 5IYDC 4FM9A 1EQRA 5JVOA 1USOA 1YCLA 1BDFA 5IOTA 1I3QK 2NVXA 1O27A 4LR2A 1IBAA 4FZBA 1IE0A 1USMA 4C45A 5C44C 4BXXK 2JA8C 2VUMA 4BBRK 3GTQK 1B4AA 3LAJA 1TWCC 1TWAC 3LAPA 1XXBA 2E2HK 3TFIA 2RH6A 3GSIA 1X31C 4Q4ZA 4A3MC 3JSTA 3AQPA 2R7ZC 3H3VD 3S17K 3GDZA 5IYBC 2ZFZA 3L4KA 1XXCA 3G4CA 1O29A 4ZH4A 4Y52K 3H0GC 2JA5K 1B4BA 1WOSA 1SFOK 3HOYC 3M4OK 1R9TC 1TWCA 1XZQB 4C2MK 3HKZL 4MQ9A 2E2JK 2KWAA 4A3IK 1RU0A 4OIRA 3ADAC 3GTLA 4G7HA 2XCRB 2R7ZA 4BBRC 2R92K 4KMUA 5C4JK 3Q3QA 3RZDK 4Q5SA 3H0GA 4AYBL 3CQZK 3PO2K 3GIRA 1XZQA 3VA7A 3N0CA 2GSNA 1ISEA 1R9TA 5FLMC 4YG2A 3SZZA 4MEYA 4Y52C 1WSRA 4OIOA 4KAWX 4Y7NK 3GTPC 3FOEA 3S2HK 1TWFK 1SFOC 1I6VA 3DXJA 1PJ5A 3GTOA 4C3JC 3M4OC 1O24A 2E2JC 4XLNA 2BE5A 2JA6C 2XCQA 4A3JC 4P5AA 2PMZD 4QIWL 3S1RK 4JK1A 4LQYA 4KN7A 3AD8C 3GTPA 4DDQA 3PO2C 5IYDK 3OEPA 1O28A 5IYCC 3T01A 2CW0A 3OREA 1EH1A 3A8KA 1ZQ1C 3S2HC 4GTAA 1TWFC 4KDDA 4BLBA 1WSVA 3TTGA 2YU9C 2JA8K 4GTBA 3HOXK 3BP8C 4OINA 2NVQC 1JVIA 1TWCK 1TWAK 2NVXC 4P9SA 2Y3PA 1JOEA 2P5MA 3FKIC 4A3KC 4KASA 4A3MK 2A6HA 3A8JA 2VUMC 4J3NA 2R7ZK 5FJ8K 4P5BA 2RGRA 3S1MC
chains in the Genus database with same CATH topology
1DCOA 3HXAA 1DCHA 1USMA 2EBBA 4C45A 2V6SA 2V6UA 4WILA 2V6TA 3JSTA 1USOA 1RU0A 4LOWA 1F93A 1DCPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1DCO A;  3HXA A;  1DCH A;  1USM A;  2EBB A;  4C45 A;  2V6S A;  2V6U A;  4WIL A;  2V6T A;  3JST A;  1USO A;  1RU0 A;  4LOW A;  1F93 A;  1DCP A; 
#chains in the Genus database with same CATH topology
 1Y1W A;  4QJV A;  2FQT A;  2GSO A;  3H0G K;  3S14 K;  2YU9 A;  3TFJ A;  3HOY K;  1R9T K;  3T02 A;  3S1N C;  3FOF A;  4GTC A;  3N3Y A;  3FKI A;  3GTG A;  3RZO C;  1IS1 A;  3HOX C;  4O2D A;  1F7U A;  1SMY A;  4XSX A;  2Y0S D;  3A8I A;  1INN A;  5C3E C;  3GTL C;  4G0V A;  1IQ0 A;  5FLM K;  3BP3 A;  1ZXO A;  2E2I A;  1YNN A;  3S14 C;  1K83 A;  3GTP K;  3V4G A;  3S16 K;  4C3J K;  3HOZ C;  4KB4 A;  2NVT C;  1KQ4 A;  1G51 A;  4GTF A;  4A3B C;  1WOP A;  2JA6 K;  4A3J K;  3GTO C;  2WB1 D;  2WAQ D;  1BS2 A;  4AH6 A;  1I50 A;  4A3F C;  1HI9 A;  4WJ3 M;  1AB4 A;  1V5V A;  4GTL A;  5IYC K;  2R93 C;  4X6A K;  4BY1 K;  2PHC B;  1BJT A;  1Y1W K;  3S16 C;  1ZBS A;  3S2D C;  5M3F K;  2YU9 K;  4G0W A;  4A93 C;  2A69 A;  2NVQ K;  3GTM C;  4KM9 A;  3H3V L;  4KM8 A;  2NVX K;  5JFE A;  2P8T A;  3S1Q C;  3AH5 A;  1O25 A;  4G0U A;  3HXA A;  3FKI K;  4YFX A;  4A3K K;  3GTG K;  2R93 A;  2VUM K;  4OIP A;  1PJ6 A;  2O5J A;  3S1M K;  1WQG A;  1O2B A;  2PPB A;  1EFW A;  4KMD A;  4GFQ A;  3GTQ A;  5E68 A;  2A68 A;  4C3H C;  4KC6 A;  4X6A C;  4BY1 C;  2JA7 C;  3GTM A;  4YFN A;  3I4M C;  1TWH C;  5TMC A;  1Y1W C;  2E2I K;  3M3Y C;  4A3L C;  1Y1V C;  4NOI A;  1WCM C;  1XZP B;  4GTE A;  3S1N K;  1O2F B;  2CFA B;  1WQF A;  3K7A C;  4BY7 C;  1J6V A;  1WOR A;  3RZO K;  4A3C C;  1VGX A;  5C4X C;  1EK8 A;  4OIQ A;  3IPJ A;  4BBS C;  5C3E K;  3GEI A;  3N0B A;  3GTL K;  3GTG C;  1XXA A;  5L46 A;  1F93 A;  5HL8 A;  5IP9 C;  1XZP A;  3HOV C;  2JA7 A;  1TWH A;  2PA8 D;  1YNJ A;  1Y1V A;  1UV7 A;  1I50 K;  4G7Z A;  2R92 A;  1WCM A;  3MML B;  2GAH C;  4MEX A;  3GTJ A;  1PJ7 A;  1WIH A;  3GTK C;  2B63 A;  3S0X A;  4KAT A;  3HOZ K;  4KN4 A;  3CQZ A;  4GTD A;  4LK1 A;  2PMZ L;  5CJ9 A;  2E2I C;  2O5I A;  3OPF A;  2NVT K;  4C3I C;  1VLO A;  3G4A A;  3PO3 C;  1K83 C;  4LOW A;  4A3B K;  3HKZ D;  3GTO K;  3HOW K;  1TWG A;  4A3F K;  1I6H C;  3HOU C;  1YX2 A;  2W7V A;  4LLG A;  2V6S A;  1GE9 A;  4M1X A;  1DCO A;  3GTK A;  1VJE A;  4AYB D;  2V6U A;  3TFH A;  2R93 K;  1I50 C;  4A3E C;  4XLP A;  1IL2 A;  5IOS A;  3S2D K;  2JH3 A;  4WJ4 A;  4A3G C;  4A93 K;  1VH2 A;  3GTM K;  5M5Y K;  2GAG C;  1DCH A;  2PA8 L;  2EBB A;  4YFK A;  3FHZ A;  3S1Q K;  2NVY C;  4BKW A;  3HOW C;  2ZUF A;  5TJ3 A;  3AD9 C;  4XSZ A;  1BGW A;  1DD5 A;  2ZUE A;  3QX3 A;  4QIW D;  4ILD A;  4BLA A;  1WQH A;  1HQM A;  1I3Q C;  3ERE D;  1TWA A;  3LPX A;  4C3H K;  4A3D K;  4GT9 A;  1ZVU A;  2JA7 K;  1J6X A;  4BXX C;  5M5W K;  4WIL A;  3I4M K;  1TWH K;  5IP7 K;  3M3Y K;  1J6W A;  4A3L K;  1Y1V K;  1XPP A;  1L0W A;  1WCM K;  3GTQ C;  2NVY A;  4KB2 A;  2Y0S L;  3WOD A;  3K7A K;  4BY7 K;  4PAB A;  2V6T A;  4KAR A;  2E2H C;  3GTJ K;  4A3C K;  1WOO A;  2B63 K;  5D4D A;  4LK0 A;  3S15 K;  5C4X K;  5EGH A;  1DCP A;  1O2A A;  4BBS K;  1I3Q A;  3S17 C;  5M3M K;  4RMF A;  5EGE A;  3BUE A;  3GEE A;  4LJZ A;  4PAA A;  2JA5 C;  5IP9 K;  2GSU A;  3HOV K;  1TWG K;  1O26 A;  2XCO A;  3L4J A;  3CAG A;  2E2H A;  3T00 A;  3I4N K;  4A3D C;  4C2M C;  2A6E A;  3GTK K;  1ZYR A;  4A3I C;  2WB1 L;  2WAQ L;  5IP7 C;  3AD7 C;  4C3I K;  1JQW A;  2R92 C;  3PO3 K;  5C4J C;  1K83 K;  3RZD C;  2D6F C;  3GTJ C;  4G7O A;  2JA5 A;  2B63 C;  1VRQ C;  3AQO A;  3CQZ C;  3S15 C;  1SFO A;  5CHP A;  1I6H K;  3HOU K;  3NUH A;  1EI6 A;  5TMF A;  3GEH A;  4Y7N C;  2CFA A;  5M5X K;  2JA6 A;  1TWG C;  3SZY A;  1C0A A;  1IW7 A;  4A3E K;  5C44 K;  4GZY A;  4QJV B;  3I4N C;  4KMH A;  3EQL A;  1F9N A;  2FQO A;  4XCH A;  5IOR A;  4A3G K;  5IOQ A;  3S1R C;  4KMA A;  1F7V A;  2NVY K;  1J98 A;  5IYB K;  1TWF A;  5IYD C;  4FM9 A;  1EQR A;  5JVO A;  1USO A;  1YCL A;  1BDF A;  5IOT A;  1I3Q K;  2NVX A;  1O27 A;  4LR2 A;  1IBA A;  4FZB A;  1IE0 A;  1USM A;  4C45 A;  5C44 C;  4BXX K;  2JA8 C;  2VUM A;  4BBR K;  3GTQ K;  1B4A A;  3LAJ A;  1TWC C;  1TWA C;  3LAP A;  1XXB A;  2E2H K;  3TFI A;  2RH6 A;  3GSI A;  1X31 C;  4Q4Z A;  4A3M C;  3JST A;  3AQP A;  2R7Z C;  3H3V D;  3S17 K;  3GDZ A;  5IYB C;  2ZFZ A;  3L4K A;  1XXC A;  3G4C A;  1O29 A;  4ZH4 A;  4Y52 K;  3H0G C;  2JA5 K;  1B4B A;  1WOS A;  1SFO K;  3HOY C;  3M4O K;  1R9T C;  1TWC A;  1XZQ B;  4C2M K;  3HKZ L;  4MQ9 A;  2E2J K;  2KWA A;  4A3I K;  1RU0 A;  4OIR A;  3ADA C;  3GTL A;  4G7H A;  2XCR B;  2R7Z A;  4BBR C;  2R92 K;  4KMU A;  5C4J K;  3Q3Q A;  3RZD K;  4Q5S A;  3H0G A;  4AYB L;  3CQZ K;  3PO2 K;  3GIR A;  1XZQ A;  3VA7 A;  3N0C A;  2GSN A;  1ISE A;  1R9T A;  5FLM C;  4YG2 A;  3SZZ A;  4MEY A;  4Y52 C;  1WSR A;  4OIO A;  4KAW X;  4Y7N K;  3GTP C;  3FOE A;  3S2H K;  1TWF K;  1SFO C;  1I6V A;  3DXJ A;  1PJ5 A;  3GTO A;  4C3J C;  3M4O C;  1O24 A;  2E2J C;  4XLN A;  2BE5 A;  2JA6 C;  2XCQ A;  4A3J C;  4P5A A;  2PMZ D;  4QIW L;  3S1R K;  4JK1 A;  4LQY A;  4KN7 A;  3AD8 C;  3GTP A;  4DDQ A;  3PO2 C;  5IYD K;  3OEP A;  1O28 A;  5IYC C;  3T01 A;  2CW0 A;  3ORE A;  1EH1 A;  3A8K A;  1ZQ1 C;  3S2H C;  4GTA A;  1TWF C;  4KDD A;  4BLB A;  1WSV A;  3TTG A;  2YU9 C;  2JA8 K;  4GTB A;  3HOX K;  3BP8 C;  4OIN A;  2NVQ C;  1JVI A;  1TWC K;  1TWA K;  2NVX C;  4P9S A;  2Y3P A;  1JOE A;  2P5M A;  3FKI C;  4A3K C;  4KAS A;  4A3M K;  2A6H A;  3A8J A;  2VUM C;  4J3N A;  2R7Z K;  5FJ8 K;  4P5B A;  2RGR A;  3S1M C; 
#chains in the Genus database with same CATH homology
 1DCO A;  3HXA A;  1DCH A;  1USM A;  2EBB A;  4C45 A;  2V6S A;  2V6U A;  4WIL A;  2V6T A;  3JST A;  1USO A;  1RU0 A;  4LOW A;  1F93 A;  1DCP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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