1ERZA

Crystal structure of n-carbamyl-d-amino acid amidohydrolase with a novel catalytic framework common to amidohydrolases
Total Genus 101
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
101
sequence length
303
structure length
303
Chain Sequence
TRQMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLFEKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVDAAKMGMFICNDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKVGMEENCMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCRELREHIFNFKQHRQPQHYGLIAEL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords N-CARBAMYL-D-AMINO ACID AMIDOHYDROLASE
publication title Crystal structure of N-carbamyl-D-amino acid amidohydrolase with a novel catalytic framework common to amidohydrolases.
pubmed doi rcsb
source organism Agrobacterium sp.
total genus 101
structure length 303
sequence length 303
chains with identical sequence B
ec nomenclature ec 3.5.1.77: N-carbamoyl-D-amino-acid hydrolase.
pdb deposition date 2000-04-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00795 CN_hydrolase Carbon-nitrogen hydrolase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.110.10 Alpha Beta 4-Layer Sandwich Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase Carbon-nitrogen hydrolase 1erzA00
3SEZA 3IVZA 4HG5A 3KLCA 4F4HA 4IZTA 4H5UA 5H8JA 3SYTA 4KZFA 4CYYA 4GYLA 1F89A 1UF4A 3SDBA 2GGLA 4HGDA 4LF0A 1UF7A 2E11A 5H8LA 3HKXA 4IZSA 1UF5A 2UXYA 3ILVA 2VHIA 4GYNA 1UF8A 3IW3A 4IZUA 3KI8A 3SEQA 3WUYA 1ERZA 2DYUA 2GGKA 2E2KA 3P8KA 4IZWA 5H8IA 4HG3A 1EMSA 5JQNA 2E2LA 4IZVA 1J31A 2VHHA 3DLAA 5H8KA 4CYGA 4CYFA 2DYVA 2W1VA 5KHAA 2PLQA 3N05A 1FO6A 3SZGA
chains in the Genus database with same CATH superfamily
3SEZA 3IVZA 4HG5A 3KLCA 4F4HA 4IZTA 4H5UA 5H8JA 3SYTA 4KZFA 4CYYA 4GYLA 1F89A 1UF4A 3SDBA 2GGLA 4HGDA 4LF0A 1UF7A 2E11A 5H8LA 3HKXA 4IZSA 1UF5A 2UXYA 3ILVA 2VHIA 4GYNA 1UF8A 3IW3A 4IZUA 3KI8A 3SEQA 3WUYA 1ERZA 2DYUA 2GGKA 2E2KA 3P8KA 4IZWA 5H8IA 4HG3A 1EMSA 5JQNA 2E2LA 4IZVA 1J31A 2VHHA 3DLAA 5H8KA 4CYGA 4CYFA 2DYVA 2W1VA 5KHAA 2PLQA 3N05A 1FO6A 3SZGA
chains in the Genus database with same CATH topology
3SEZA 3IVZA 4HG5A 3KLCA 4F4HA 4IZTA 4H5UA 5H8JA 3SYTA 4KZFA 4CYYA 4GYLA 1F89A 1UF4A 3SDBA 2GGLA 4HGDA 4LF0A 1UF7A 2E11A 5H8LA 3HKXA 4IZSA 1UF5A 2UXYA 3ILVA 2VHIA 4GYNA 1UF8A 3IW3A 4IZUA 3KI8A 3SEQA 3WUYA 1ERZA 2DYUA 2GGKA 2E2KA 3P8KA 4IZWA 5H8IA 4HG3A 1EMSA 5JQNA 2E2LA 4IZVA 1J31A 2VHHA 3DLAA 5H8KA 4CYGA 4CYFA 2DYVA 2W1VA 5KHAA 2PLQA 3N05A 1FO6A 3SZGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3SEZ A;  3IVZ A;  4HG5 A;  3KLC A;  4F4H A;  4IZT A;  4H5U A;  5H8J A;  3SYT A;  4KZF A;  4CYY A;  4GYL A;  1F89 A;  1UF4 A;  3SDB A;  2GGL A;  4HGD A;  4LF0 A;  1UF7 A;  2E11 A;  5H8L A;  3HKX A;  4IZS A;  1UF5 A;  2UXY A;  3ILV A;  2VHI A;  4GYN A;  1UF8 A;  3IW3 A;  4IZU A;  3KI8 A;  3SEQ A;  3WUY A;  1ERZ A;  2DYU A;  2GGK A;  2E2K A;  3P8K A;  4IZW A;  5H8I A;  4HG3 A;  1EMS A;  5JQN A;  2E2L A;  4IZV A;  1J31 A;  2VHH A;  3DLA A;  5H8K A;  4CYG A;  4CYF A;  2DYV A;  2W1V A;  5KHA A;  2PLQ A;  3N05 A;  1FO6 A;  3SZG A; 
#chains in the Genus database with same CATH topology
 3SEZ A;  3IVZ A;  4HG5 A;  3KLC A;  4F4H A;  4IZT A;  4H5U A;  5H8J A;  3SYT A;  4KZF A;  4CYY A;  4GYL A;  1F89 A;  1UF4 A;  3SDB A;  2GGL A;  4HGD A;  4LF0 A;  1UF7 A;  2E11 A;  5H8L A;  3HKX A;  4IZS A;  1UF5 A;  2UXY A;  3ILV A;  2VHI A;  4GYN A;  1UF8 A;  3IW3 A;  4IZU A;  3KI8 A;  3SEQ A;  3WUY A;  1ERZ A;  2DYU A;  2GGK A;  2E2K A;  3P8K A;  4IZW A;  5H8I A;  4HG3 A;  1EMS A;  5JQN A;  2E2L A;  4IZV A;  1J31 A;  2VHH A;  3DLA A;  5H8K A;  4CYG A;  4CYF A;  2DYV A;  2W1V A;  5KHA A;  2PLQ A;  3N05 A;  1FO6 A;  3SZG A; 
#chains in the Genus database with same CATH homology
 3SEZ A;  3IVZ A;  4HG5 A;  3KLC A;  4F4H A;  4IZT A;  4H5U A;  5H8J A;  3SYT A;  4KZF A;  4CYY A;  4GYL A;  1F89 A;  1UF4 A;  3SDB A;  2GGL A;  4HGD A;  4LF0 A;  1UF7 A;  2E11 A;  5H8L A;  3HKX A;  4IZS A;  1UF5 A;  2UXY A;  3ILV A;  2VHI A;  4GYN A;  1UF8 A;  3IW3 A;  4IZU A;  3KI8 A;  3SEQ A;  3WUY A;  1ERZ A;  2DYU A;  2GGK A;  2E2K A;  3P8K A;  4IZW A;  5H8I A;  4HG3 A;  1EMS A;  5JQN A;  2E2L A;  4IZV A;  1J31 A;  2VHH A;  3DLA A;  5H8K A;  4CYG A;  4CYF A;  2DYV A;  2W1V A;  5KHA A;  2PLQ A;  3N05 A;  1FO6 A;  3SZG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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