1F32A

Crystal structure of ascaris pepsin inhibitor-3
Total Genus 33
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
33
sequence length
147
structure length
127
Chain Sequence
FLFSMSTGPFICTVKDNQVFVANLPWTMLEGDDIQVGKEFAARVEDCTNVKHDMAPTCTKPPPFCGPQDMKMFNFVGCSVLGNKLFIDQKYVRDLTAKDHAEVQTFREKIAAFEEQSPPPPPSFCTV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase inhibitor
molecule keywords MAJOR PEPSIN INHIBITOR PI-3
publication title Structural basis for the inhibition of porcine pepsin by Ascaris pepsin inhibitor-3.
pubmed doi rcsb
source organism Ascaris suum
total genus 33
structure length 127
sequence length 147
ec nomenclature
pdb deposition date 2000-05-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF06394 Pepsin-I3 Pepsin inhibitor-3-like repeated domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1120.50 Alpha Beta 2-Layer Sandwich Arylsulfatase, C-terminal domain Pepsin inhibitor-3 1f32A01
3.30.1120.50 Alpha Beta 2-Layer Sandwich Arylsulfatase, C-terminal domain Pepsin inhibitor-3 1f32A02
1F32A 1F34B
chains in the Genus database with same CATH superfamily
2N19A 4LKLA 1E2TA 3HFDA 1N2KA 5DMVC 2E50A 4CYSA 1Q4OA 4E67A 3ED4A 4CXUA 2IA9A 3LM3A 3LXQA 3P35A 4HY2A 1P49A 5DMSA 3P36A 1N2LA 2VKZG 4FDIA 5DAYA 4N7ZA 4O9WA 2OGQA 3P2ZA 3HIKA 3GYVA 1F34B 1E1ZP 1HDHA 3HIHA 4NKBA 4RS6A 4X9VA 1A87A 4CXSA 3HMJG 4LKMA 1E2SP 4CYRA 1AUKA 2OJXA 3P2WA 3KDRA 4E9CA 4HABA 4WHHA 4N9JA 4NK7A 4E9DA 3P37A 1Q4KA 4RCPA 3P34A 5DNJA 4XB0A 3Q1IA 1FSUA 4N7VA 4WHKA 5AJ9A 4HCOA 5LHZA 4X9RA 4DFWA 2I9XA 1E3CP 4WHLA 2I9ZA 4X9WA 3GYWA 2QZUA 1F32A 3C5LA 3FVHA 4YYPA 4H71A 4O6WA 3BZIA 4FDJA 4G7NA 4J7BB 3FS3A 2UV8G 3RQ7A 1E33P 1UMWA 4H5XA 5J19A 4CXKA 4O56A
chains in the Genus database with same CATH topology
1F32A 1F34B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1F32 A;  1F34 B; 
#chains in the Genus database with same CATH topology
 2N19 A;  4LKL A;  1E2T A;  3HFD A;  1N2K A;  5DMV C;  2E50 A;  4CYS A;  1Q4O A;  4E67 A;  3ED4 A;  4CXU A;  2IA9 A;  3LM3 A;  3LXQ A;  3P35 A;  4HY2 A;  1P49 A;  5DMS A;  3P36 A;  1N2L A;  2VKZ G;  4FDI A;  5DAY A;  4N7Z A;  4O9W A;  2OGQ A;  3P2Z A;  3HIK A;  3GYV A;  1F34 B;  1E1Z P;  1HDH A;  3HIH A;  4NKB A;  4RS6 A;  4X9V A;  1A87 A;  4CXS A;  3HMJ G;  4LKM A;  1E2S P;  4CYR A;  1AUK A;  2OJX A;  3P2W A;  3KDR A;  4E9C A;  4HAB A;  4WHH A;  4N9J A;  4NK7 A;  4E9D A;  3P37 A;  1Q4K A;  4RCP A;  3P34 A;  5DNJ A;  4XB0 A;  3Q1I A;  1FSU A;  4N7V A;  4WHK A;  5AJ9 A;  4HCO A;  5LHZ A;  4X9R A;  4DFW A;  2I9X A;  1E3C P;  4WHL A;  2I9Z A;  4X9W A;  3GYW A;  2QZU A;  1F32 A;  3C5L A;  3FVH A;  4YYP A;  4H71 A;  4O6W A;  3BZI A;  4FDJ A;  4G7N A;  4J7B B;  3FS3 A;  2UV8 G;  3RQ7 A;  1E33 P;  1UMW A;  4H5X A;  5J19 A;  4CXK A;  4O56 A; 
#chains in the Genus database with same CATH homology
 1F32 A;  1F34 B; 
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similar chains in the Genus database (?% sequence similarity)
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#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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