1FAQA

Raf-1 cysteine rich domain, nmr, 27 structures
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
52
structure length
52
Chain Sequence
LTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Serine/threonine protein kinase
molecule keywords RAF-1
publication title The solution structure of the Raf-1 cysteine-rich domain: a novel ras and phospholipid binding site.
pubmed doi rcsb
source organism Homo sapiens
total genus 4
structure length 52
sequence length 52
ec nomenclature ec 2.7.11.1: Non-specific serine/threonine protein kinase.
pdb deposition date 1996-09-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00130 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1faqA00
3KY9A 1Y8FA 2B8TA 1FARA 2VRWB 3UFFA 3UGIA 2UZ3A 1KBEA 3UGDA 3UEYA 4B6DA 1W4RA 1XA6A 2QQEA 2ROWA 2DB6A 2JA1A 3UEJA 1PTQA 2GVIA 2ORWA 2ELIA 2ORVA 2ENZA 1FAQA 2QQ0A 1TBNA 1TBOA 5FUVA 2WVJA 4UXJA 1KBFA 2YUUA 4L9MA 2ENNA 4UXIA 5FUWA 2J87A 3CXLA 1R79A 3E2IA 1RFHA 2J9RA 3BJIA 4FKDA 2E73A 1PTRA 2QPOA 1XX6A 5FUXA 4UXHA 5FUYA 1XBTA 3UGLA 2FNFX
chains in the Genus database with same CATH superfamily
3GOXA 1FARA 1CT2I 2NU1I 3QWPA 3R5BA 2N17A 5HI7A 4B6DA 1TGSI 1UUCA 1X4SA 1PTQA 2CWGA 3TO6A 2ODDA 2JZMA 5J8CA 1BUSA 1V1IA 2LB7A 1FAQA 3SGQI 2SGDI 1OMUA 3FSYA 2DKVA 3QTLD 1OVOA 3R5DA 1HEVA 5J8FA 4L9MA 1MJBA 2CWHA 1TUSA 1ULNA 4AMLA 1MT1A 1UVGA 3TOBA 3VDPA 4MPIA 1PTRA 5FUYA 4UXHA 1SGQI 1Z7KB 1XBTA 2X52A 1IW4A 3VE5A 1WTJA 2ARPF 2WCYA 3RU0A 1WGCA 1K7VA 1FY7A 1Y8FA 2NU4I 1TOTA 3VDUA 4E1RA 3R5CA 1WGTA 2KMQA 1M8BA 2QQCA 2SGQI 2Y0MA 3OVOA 3R5AA 4OVOA 1W4RA 1XA6A 2B0UC 2ROWA 3TOAA 3UEYA 5CCLA 2X3TA 1AN1I 1ULMA 2DIPA 1UVFA 1Y1CA 2CJSC 2GVIA 2ORWA 2ELIA 2RC4A 2NU3I 4SGBI 3UOEA 2QQ0A 5HQ8A 2GIVA 2LUYA 2L8EA 2PQ8A 2YUUA 2OU2A 3QAHA 4JCVE 5EX3A 4A24A 1KMAA 5FUWA 1P9GA 2J87A 3B4VC 3FC3A 1HDLA 1BMOA 1SGRI 2SGPI 1IY5A 1CGJI 2J9RA 3BJIA 5E3RA 2ERWA 2GKVA 2JXDA 5DAEA 4DNCA 1K7TA 1WKXA 2KMPA 2W0TA 3OL0A 1CE3A 4GI3C 1DS3I 1PCEA 1PPFI 1Z2IA 1TIHA 2B8TA 1NXUA 3UFFA 2F3CI 2P6AC 5E3QA 3OXFA 2K9HA 3SEKC 1Y1BA 3UGDA 1W3SA 2NU2I 3UEJA 3SGBI 1OYVI 2KMOA 1V1HA 1P9ZA 1FYBA 1X74A 2M5XA 2N52A 2L7XA 2ORVA 1TBNA 3OXGA 4WP4A 3TO7A 1H0ZA 4HGUA 5FUVA 1MJ9A 2WVJA 4UXJA 1CGII 7WGAA 1SGYI 1SGPI 1CT4I 2KCXA 5EX0A 1ULKA 1HJAI 1U5KA 2ENNA 2GKTI 2E5RA 3MEKA 9WGAA 2CWFA 1YU6C 1K7UA 4FKDA 5CCMA 1UHAA 2JW6A 2LEOA 2NU0I 2QPOA 2SGEI 2YQPA 1CT0I 2RIJA 1SGEI 2SGFI 1OMTA 5FUXA 2OZUA 3HH2C 2FNFX 2V1CC 1S20A 3KY9A 2VRWB 3UGIA 1MJAA 2UZ3A 2V1CA 5JHWC 2UVOA 1HPTA 1KBEA 2N71A 1NUBA 2QQEA 2V53A 2DB6A 1SGNI 2JA1A 3FSXA 3TJQA 3D00A 1PJUA 2OD1A 5E3PA 2KMRA 1SGDI 2ENZA 2OVOA 1YTPA 2QQDA 1TBOA 3OXLA 2A20A 1Q9BA 1CSOI 2BUSA 1KBFA 2WGCA 2N1AB 2JYYA 2XRCA 1TURA 3PDNA 4E1PA 1LR9A 3E59A 4UXIA 3CXLA 1R79A 1CHOI 1LR7A 1RFHA 3E2IA 1LR8A 1TBQR 1R0RI 2E73A 3TO9A 1DS2I 1TBRR 1XX6A 1IY6A 2GKRI 1M8CA 1N13A 1VDDA 3UGLA
chains in the Genus database with same CATH topology
3GOXA 1FARA 1CT2I 2NU1I 3QWPA 2N17A 5HI7A 4B6DA 1TGSI 1UUCA 1X4SA 1PTQA 2ODDA 2JZMA 1BUSA 1FAQA 1V1IA 3SGQI 2SGDI 1OMUA 3QTLD 1OVOA 4L9MA 1TUSA 1MT1A 1UVGA 3VDPA 1PTRA 5FUYA 4UXHA 1SGQI 1Z7KB 1XBTA 1IW4A 2ARPF 2WCYA 3RU0A 1Y8FA 2NU4I 1TOTA 3VDUA 4E1RA 4OVOA 2KMQA 3VE5A 1M8BA 2QQCA 2SGQI 3OVOA 3UEYA 1W4RA 1XA6A 2B0UC 2ROWA 5CCLA 1AN1I 2DIPA 2GVIA 1UVFA 1Y1CA 2CJSC 2ORWA 2YQPA 2ELIA 4SGBI 2NU3I 5HQ8A 1IY5A 2QQ0A 2LUYA 2L8EA 2YUUA 4JCVE 5EX3A 4A24A 1KMAA 5FUWA 2J87A 3B4VC 3FC3A 1HDLA 1BMOA 1SGRI 2SGPI 1CGJI 2J9RA 3BJIA 2ERWA 2GKVA 2JXDA 5DAEA 2KMPA 2W0TA 3OL0A 1CE3A 4GI3C 1DS3I 1PCEA 1PPFI 1TIHA 2B8TA 3UFFA 2F3CI 2P6AC 3SEKC 3OXFA 2K9HA 1Y1BA 3UGDA 1W3SA 2NU2I 3UEJA 3SGBI 1OYVI 2KMOA 1V1HA 1FYBA 1X74A 2M5XA 2N52A 2L7XA 2ORVA 1TBNA 3OXGA 1H0ZA 4HGUA 5FUVA 2WVJA 4UXJA 1CGII 1SGYI 1SGPI 1CT4I 2KCXA 5EX0A 1HJAI 1U5KA 2ENNA 2GKTI 2E5RA 3MEKA 1YU6C 4FKDA 5CCMA 2JW6A 2LEOA 2NU0I 2QPOA 2SGEI 5FUXA 1CT0I 2SGFI 1SGEI 1OMTA 3HH2C 2FNFX 2V1CC 3KY9A 2VRWB 3UGIA 2UZ3A 2V1CA 5JHWC 1HPTA 1KBEA 2N71A 1NUBA 2QQEA 2V53A 2DB6A 1SGNI 2JA1A 3TJQA 3D00A 1PJUA 2OD1A 2KMRA 1SGDI 2ENZA 2OVOA 1YTPA 2QQDA 1TBOA 3OXLA 2A20A 2BUSA 1CSOI 1KBFA 2N1AB 2JYYA 2XRCA 1TURA 3PDNA 4E1PA 1LR9A 3E59A 4UXIA 3CXLA 1R79A 1LR7A 1CHOI 1RFHA 3E2IA 1LR8A 1TBQR 1R0RI 2E73A 1DS2I 1TBRR 1XX6A 1IY6A 2GKRI 1M8CA 1N13A 1VDDA 3UGLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KY9 A;  1Y8F A;  2B8T A;  1FAR A;  2VRW B;  3UFF A;  3UGI A;  2UZ3 A;  1KBE A;  3UGD A;  3UEY A;  4B6D A;  1W4R A;  1XA6 A;  2QQE A;  2ROW A;  2DB6 A;  2JA1 A;  3UEJ A;  1PTQ A;  2GVI A;  2ORW A;  2ELI A;  2ORV A;  2ENZ A;  1FAQ A;  2QQ0 A;  1TBN A;  1TBO A;  5FUV A;  2WVJ A;  4UXJ A;  1KBF A;  2YUU A;  4L9M A;  2ENN A;  4UXI A;  5FUW A;  2J87 A;  3CXL A;  1R79 A;  3E2I A;  1RFH A;  2J9R A;  3BJI A;  4FKD A;  2E73 A;  1PTR A;  2QPO A;  1XX6 A;  5FUX A;  4UXH A;  5FUY A;  1XBT A;  3UGL A;  2FNF X; 
#chains in the Genus database with same CATH topology
 3GOX A;  1FAR A;  1CT2 I;  2NU1 I;  3QWP A;  3R5B A;  2N17 A;  5HI7 A;  4B6D A;  1TGS I;  1UUC A;  1X4S A;  1PTQ A;  2CWG A;  3TO6 A;  2ODD A;  2JZM A;  5J8C A;  1BUS A;  1V1I A;  2LB7 A;  1FAQ A;  3SGQ I;  2SGD I;  1OMU A;  3FSY A;  2DKV A;  3QTL D;  1OVO A;  3R5D A;  1HEV A;  5J8F A;  4L9M A;  1MJB A;  2CWH A;  1TUS A;  1ULN A;  4AML A;  1MT1 A;  1UVG A;  3TOB A;  3VDP A;  4MPI A;  1PTR A;  5FUY A;  4UXH A;  1SGQ I;  1Z7K B;  1XBT A;  2X52 A;  1IW4 A;  3VE5 A;  1WTJ A;  2ARP F;  2WCY A;  3RU0 A;  1WGC A;  1K7V A;  1FY7 A;  1Y8F A;  2NU4 I;  1TOT A;  3VDU A;  4E1R A;  3R5C A;  1WGT A;  2KMQ A;  1M8B A;  2QQC A;  2SGQ I;  2Y0M A;  3OVO A;  3R5A A;  4OVO A;  1W4R A;  1XA6 A;  2B0U C;  2ROW A;  3TOA A;  3UEY A;  5CCL A;  2X3T A;  1AN1 I;  1ULM A;  2DIP A;  1UVF A;  1Y1C A;  2CJS C;  2GVI A;  2ORW A;  2ELI A;  2RC4 A;  2NU3 I;  4SGB I;  3UOE A;  2QQ0 A;  5HQ8 A;  2GIV A;  2LUY A;  2L8E A;  2PQ8 A;  2YUU A;  2OU2 A;  3QAH A;  4JCV E;  5EX3 A;  4A24 A;  1KMA A;  5FUW A;  1P9G A;  2J87 A;  3B4V C;  3FC3 A;  1HDL A;  1BMO A;  1SGR I;  2SGP I;  1IY5 A;  1CGJ I;  2J9R A;  3BJI A;  5E3R A;  2ERW A;  2GKV A;  2JXD A;  5DAE A;  4DNC A;  1K7T A;  1WKX A;  2KMP A;  2W0T A;  3OL0 A;  1CE3 A;  4GI3 C;  1DS3 I;  1PCE A;  1PPF I;  1Z2I A;  1TIH A;  2B8T A;  1NXU A;  3UFF A;  2F3C I;  2P6A C;  5E3Q A;  3OXF A;  2K9H A;  3SEK C;  1Y1B A;  3UGD A;  1W3S A;  2NU2 I;  3UEJ A;  3SGB I;  1OYV I;  2KMO A;  1V1H A;  1P9Z A;  1FYB A;  1X74 A;  2M5X A;  2N52 A;  2L7X A;  2ORV A;  1TBN A;  3OXG A;  4WP4 A;  3TO7 A;  1H0Z A;  4HGU A;  5FUV A;  1MJ9 A;  2WVJ A;  4UXJ A;  1CGI I;  7WGA A;  1SGY I;  1SGP I;  1CT4 I;  2KCX A;  5EX0 A;  1ULK A;  1HJA I;  1U5K A;  2ENN A;  2GKT I;  2E5R A;  3MEK A;  9WGA A;  2CWF A;  1YU6 C;  1K7U A;  4FKD A;  5CCM A;  1UHA A;  2JW6 A;  2LEO A;  2NU0 I;  2QPO A;  2SGE I;  2YQP A;  1CT0 I;  2RIJ A;  1SGE I;  2SGF I;  1OMT A;  5FUX A;  2OZU A;  3HH2 C;  2FNF X;  2V1C C;  1S20 A;  3KY9 A;  2VRW B;  3UGI A;  1MJA A;  2UZ3 A;  2V1C A;  5JHW C;  2UVO A;  1HPT A;  1KBE A;  2N71 A;  1NUB A;  2QQE A;  2V53 A;  2DB6 A;  1SGN I;  2JA1 A;  3FSX A;  3TJQ A;  3D00 A;  1PJU A;  2OD1 A;  5E3P A;  2KMR A;  1SGD I;  2ENZ A;  2OVO A;  1YTP A;  2QQD A;  1TBO A;  3OXL A;  2A20 A;  1Q9B A;  1CSO I;  2BUS A;  1KBF A;  2WGC A;  2N1A B;  2JYY A;  2XRC A;  1TUR A;  3PDN A;  4E1P A;  1LR9 A;  3E59 A;  4UXI A;  3CXL A;  1R79 A;  1CHO I;  1LR7 A;  1RFH A;  3E2I A;  1LR8 A;  1TBQ R;  1R0R I;  2E73 A;  3TO9 A;  1DS2 I;  1TBR R;  1XX6 A;  1IY6 A;  2GKR I;  1M8C A;  1N13 A;  1VDD A;  3UGL A; 
#chains in the Genus database with same CATH homology
 3GOX A;  1FAR A;  1CT2 I;  2NU1 I;  3QWP A;  2N17 A;  5HI7 A;  4B6D A;  1TGS I;  1UUC A;  1X4S A;  1PTQ A;  2ODD A;  2JZM A;  1BUS A;  1FAQ A;  1V1I A;  3SGQ I;  2SGD I;  1OMU A;  3QTL D;  1OVO A;  4L9M A;  1TUS A;  1MT1 A;  1UVG A;  3VDP A;  1PTR A;  5FUY A;  4UXH A;  1SGQ I;  1Z7K B;  1XBT A;  1IW4 A;  2ARP F;  2WCY A;  3RU0 A;  1Y8F A;  2NU4 I;  1TOT A;  3VDU A;  4E1R A;  4OVO A;  2KMQ A;  3VE5 A;  1M8B A;  2QQC A;  2SGQ I;  3OVO A;  3UEY A;  1W4R A;  1XA6 A;  2B0U C;  2ROW A;  5CCL A;  1AN1 I;  2DIP A;  2GVI A;  1UVF A;  1Y1C A;  2CJS C;  2ORW A;  2YQP A;  2ELI A;  4SGB I;  2NU3 I;  5HQ8 A;  1IY5 A;  2QQ0 A;  2LUY A;  2L8E A;  2YUU A;  4JCV E;  5EX3 A;  4A24 A;  1KMA A;  5FUW A;  2J87 A;  3B4V C;  3FC3 A;  1HDL A;  1BMO A;  1SGR I;  2SGP I;  1CGJ I;  2J9R A;  3BJI A;  2ERW A;  2GKV A;  2JXD A;  5DAE A;  2KMP A;  2W0T A;  3OL0 A;  1CE3 A;  4GI3 C;  1DS3 I;  1PCE A;  1PPF I;  1TIH A;  2B8T A;  3UFF A;  2F3C I;  2P6A C;  3SEK C;  3OXF A;  2K9H A;  1Y1B A;  3UGD A;  1W3S A;  2NU2 I;  3UEJ A;  3SGB I;  1OYV I;  2KMO A;  1V1H A;  1FYB A;  1X74 A;  2M5X A;  2N52 A;  2L7X A;  2ORV A;  1TBN A;  3OXG A;  1H0Z A;  4HGU A;  5FUV A;  2WVJ A;  4UXJ A;  1CGI I;  1SGY I;  1SGP I;  1CT4 I;  2KCX A;  5EX0 A;  1HJA I;  1U5K A;  2ENN A;  2GKT I;  2E5R A;  3MEK A;  1YU6 C;  4FKD A;  5CCM A;  2JW6 A;  2LEO A;  2NU0 I;  2QPO A;  2SGE I;  5FUX A;  1CT0 I;  2SGF I;  1SGE I;  1OMT A;  3HH2 C;  2FNF X;  2V1C C;  3KY9 A;  2VRW B;  3UGI A;  2UZ3 A;  2V1C A;  5JHW C;  1HPT A;  1KBE A;  2N71 A;  1NUB A;  2QQE A;  2V53 A;  2DB6 A;  1SGN I;  2JA1 A;  3TJQ A;  3D00 A;  1PJU A;  2OD1 A;  2KMR A;  1SGD I;  2ENZ A;  2OVO A;  1YTP A;  2QQD A;  1TBO A;  3OXL A;  2A20 A;  2BUS A;  1CSO I;  1KBF A;  2N1A B;  2JYY A;  2XRC A;  1TUR A;  3PDN A;  4E1P A;  1LR9 A;  3E59 A;  4UXI A;  3CXL A;  1R79 A;  1LR7 A;  1CHO I;  1RFH A;  3E2I A;  1LR8 A;  1TBQ R;  1R0R I;  2E73 A;  1DS2 I;  1TBR R;  1XX6 A;  1IY6 A;  2GKR I;  1M8C A;  1N13 A;  1VDD A;  3UGL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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