1FARA

Raf-1 cysteine rich domain, nmr, minimized average structure
Total Genus 2
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
2
sequence length
52
structure length
52
Chain Sequence
LTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Serine/threonine protein kinase
molecule keywords RAF-1
publication title The solution structure of the Raf-1 cysteine-rich domain: a novel ras and phospholipid binding site.
pubmed doi rcsb
source organism Homo sapiens
total genus 2
structure length 52
sequence length 52
ec nomenclature ec 2.7.11.1: Non-specific serine/threonine protein kinase.
pdb deposition date 1996-09-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00130 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1farA00
4UXIA 1TBNA 1FARA 3KY9A 2DB6A 2J9RA 2E73A 1FAQA 5FUYA 1KBFA 1RFHA 3UEYA 1W4RA 1PTQA 5FUXA 3UEJA 5FUWA 2ORWA 1R79A 3UGLA 2UZ3A 1KBEA 2FNFX 4FKDA 5FUVA 3UGIA 2ROWA 3BJIA 1XBTA 2ORVA 2QQ0A 1PTRA 3CXLA 2B8TA 2QQEA 2J87A 1XX6A 1TBOA 2GVIA 3E2IA 3UFFA 2ENNA 4UXHA 2JA1A 1Y8FA 1XA6A 2WVJA 4L9MA 4UXJA 2YUUA 4B6DA 2ELIA 3UGDA 2VRWB 2ENZA 2QPOA
chains in the Genus database with same CATH superfamily
1HJAI 2N1AB 1SGPI 3D00A 3TOBA 2KMRA 2LB7A 5E3PA 2E73A 4DNCA 1UHAA 2RC4A 5E3QA 3R5AA 7WGAA 1CT2I 2ARPF 2OZUA 2UVOA 1PTQA 2A20A 3QTLD 1SGEI 2SGFI 3SEKC 1TURA 1IY6A 3UGLA 2V1CC 2N52A 1AN1I 3FC3A 1YU6C 1WTJA 2GKTI 2RIJA 1MJBA 2ROWA 4FKDA 5FUVA 5HI7A 2ORVA 1WKXA 3OVOA 1FYBA 3TOAA 1BMOA 1SGYI 1CT0I 3RU0A 3CXLA 2QQEA 1VDDA 1OYVI 2GVIA 1DS2I 1CGII 1LR8A 2GKRI 2X3TA 2ERWA 5HQ8A 2LUYA 2KMPA 1YTPA 1CT4I 4MPIA 3TO6A 2OU2A 4B6DA 1ULKA 2ELIA 5EX0A 3UGDA 2NU1I 2VRWB 2KCXA 3TO7A 1IW4A 4UXIA 1S20A 1TBNA 1FARA 3TO9A 1NUBA 1K7VA 2DB6A 2J9RA 4HGUA 1TGSI 2L7XA 3OXGA 3HH2C 1RFHA 2K9HA 2NU2I 3R5CA 4JCVE 1V1HA 5FUWA 1WGTA 2CWFA 1CGJI 2WGCA 1R0RI 1UVFA 2NU3I 1SGNI 1KBEA 1ULNA 2FNFX 3E59A 3OL0A 2N71A 5JHWC 2PQ8A 3UGIA 2NU0I 3BJIA 1ULMA 4SGBI 3SGQI 1TBRR 1PTRA 1CSOI 1V1IA 1Z2IA 2B8TA 2CJSC 2CWHA 3VE5A 1TBOA 2SGEI 4WP4A 1OVOA 3SGBI 1X74A 1Y8FA 1UUCA 1DS3I 1NXUA 1TBQR 2YUUA 1MJ9A 3FSXA 1P9GA 1Y1CA 2DIPA 2ODDA 2SGDI 1LR9A 1W3SA 1MT1A 1UVGA 1HDLA 1SGRI 1HPTA 5EX3A 1P9ZA 1M8CA 3VDPA 1HEVA 1SGQI 4E1RA 2KMQA 1FAQA 2SGQI 5DAEA 1Y1BA 1CHOI 1PJUA 2SGPI 3PDNA 2F3CI 2B0UC 3UEYA 4AMLA 1H0ZA 3UEJA 1R79A 2UZ3A 1OMUA 2BUSA 3QWPA 3B4VC 1U5KA 5CCLA 3VDUA 5J8CA 2P6AC 3OXFA 2W0TA 1TIHA 1XBTA 2QQ0A 2V53A 3QAHA 3E2IA 1XX6A 1LR7A 3UFFA 2ENNA 2JZMA 2M5XA 2QQDA 1Q9BA 2WCYA 2CWGA 2OD1A 5J8FA 2WVJA 1XA6A 4UXJA 1Z7KB 2V1CA 3R5BA 3TJQA 1SGDI 2N17A 2GIVA 2ENZA 2QPOA 4E1PA 1CE3A 1FY7A 1X4SA 3KY9A 2Y0MA 2QQCA 3OXLA 2YQPA 3GOXA 2OVOA 2E5RA 4OVOA 5FUYA 1IY5A 1KBFA 1PCEA 1PPFI 1W4RA 2L8EA 5FUXA 3UOEA 9WGAA 2JW6A 5E3RA 1OMTA 1M8BA 2JYYA 1MJAA 2ORWA 1BUSA 1K7UA 2NU4I 2XRCA 1N13A 1TUSA 4A24A 3FSYA 2GKVA 1TOTA 1WGCA 5CCMA 2J87A 2DKVA 4UXHA 4GI3C 2JXDA 2KMOA 2LEOA 3R5DA 2JA1A 3MEKA 4L9MA 1K7TA 2X52A 1KMAA
chains in the Genus database with same CATH topology
1HJAI 2N1AB 1SGPI 3D00A 2KMRA 2E73A 1CT2I 2ARPF 3SEKC 1PTQA 2A20A 3QTLD 1SGEI 2SGFI 1TURA 1IY6A 3UGLA 2V1CC 2N52A 1AN1I 3FC3A 1YU6C 4FKDA 2GKTI 5FUVA 2ROWA 5HI7A 1FYBA 2ORVA 3OVOA 1BMOA 1SGYI 1CT0I 3RU0A 3CXLA 2QQEA 1VDDA 1OYVI 2GVIA 1DS2I 1CGII 1LR8A 2GKRI 2ERWA 5HQ8A 2LUYA 2KMPA 1YTPA 1CT4I 4B6DA 2ELIA 5EX0A 3UGDA 2NU1I 2VRWB 2KCXA 1IW4A 4UXIA 1TBNA 1FARA 1NUBA 2DB6A 2J9RA 4HGUA 1TGSI 2L7XA 3OXGA 3HH2C 1RFHA 2K9HA 2NU2I 4JCVE 1V1HA 5FUWA 1CGJI 1R0RI 1UVFA 2NU3I 1SGNI 1KBEA 2FNFX 3E59A 5JHWC 3OL0A 2N71A 3UGIA 2NU0I 3BJIA 4SGBI 3SGQI 1TBRR 2CJSC 1PTRA 1CSOI 1V1IA 2B8TA 3VE5A 5CCMA 1TBOA 2SGEI 1OVOA 3SGBI 1X74A 1Y8FA 1UUCA 1DS3I 1TBQR 2YUUA 1Y1CA 2DIPA 2ODDA 2SGDI 1LR9A 1W3SA 1MT1A 1UVGA 1HDLA 1SGRI 1HPTA 5EX3A 1M8CA 3VDPA 1SGQI 4E1RA 2KMQA 1FAQA 2SGQI 5DAEA 1Y1BA 1CHOI 1PJUA 2SGPI 3PDNA 2F3CI 2B0UC 3UEYA 1H0ZA 3UEJA 1R79A 2UZ3A 1OMUA 2BUSA 3QWPA 3B4VC 1U5KA 5CCLA 3VDUA 2P6AC 3OXFA 2W0TA 1TIHA 1XBTA 2QQ0A 2V53A 3E2IA 1XX6A 1LR7A 3UFFA 2ENNA 2JZMA 2M5XA 2QQDA 2WCYA 2OD1A 2WVJA 1XA6A 4UXJA 1Z7KB 2V1CA 3TJQA 1SGDI 2N17A 2ENZA 2QPOA 4E1PA 1CE3A 1X4SA 3KY9A 3OXLA 2QQCA 2YQPA 3GOXA 2OVOA 2E5RA 4OVOA 5FUYA 1IY5A 1KBFA 1PCEA 1PPFI 1W4RA 2L8EA 5FUXA 2JW6A 1OMTA 1M8BA 2JYYA 1BUSA 2ORWA 2NU4I 2XRCA 1N13A 1TUSA 4A24A 2GKVA 1TOTA 2J87A 4UXHA 4GI3C 2JXDA 2KMOA 2LEOA 2JA1A 3MEKA 4L9MA 1KMAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4UXI A;  1TBN A;  1FAR A;  3KY9 A;  2DB6 A;  2J9R A;  2E73 A;  1FAQ A;  5FUY A;  1KBF A;  1RFH A;  3UEY A;  1W4R A;  1PTQ A;  5FUX A;  3UEJ A;  5FUW A;  2ORW A;  1R79 A;  3UGL A;  2UZ3 A;  1KBE A;  2FNF X;  4FKD A;  5FUV A;  3UGI A;  2ROW A;  3BJI A;  1XBT A;  2ORV A;  2QQ0 A;  1PTR A;  3CXL A;  2B8T A;  2QQE A;  2J87 A;  1XX6 A;  1TBO A;  2GVI A;  3E2I A;  3UFF A;  2ENN A;  4UXH A;  2JA1 A;  1Y8F A;  1XA6 A;  2WVJ A;  4L9M A;  4UXJ A;  2YUU A;  4B6D A;  2ELI A;  3UGD A;  2VRW B;  2ENZ A;  2QPO A; 
#chains in the Genus database with same CATH topology
 1HJA I;  2N1A B;  1SGP I;  3D00 A;  3TOB A;  2KMR A;  2LB7 A;  5E3P A;  2E73 A;  4DNC A;  1UHA A;  2RC4 A;  5E3Q A;  3R5A A;  7WGA A;  1CT2 I;  2ARP F;  2OZU A;  2UVO A;  1PTQ A;  2A20 A;  3QTL D;  1SGE I;  2SGF I;  3SEK C;  1TUR A;  1IY6 A;  3UGL A;  2V1C C;  2N52 A;  1AN1 I;  3FC3 A;  1YU6 C;  1WTJ A;  2GKT I;  2RIJ A;  1MJB A;  2ROW A;  4FKD A;  5FUV A;  5HI7 A;  2ORV A;  1WKX A;  3OVO A;  1FYB A;  3TOA A;  1BMO A;  1SGY I;  1CT0 I;  3RU0 A;  3CXL A;  2QQE A;  1VDD A;  1OYV I;  2GVI A;  1DS2 I;  1CGI I;  1LR8 A;  2GKR I;  2X3T A;  2ERW A;  5HQ8 A;  2LUY A;  2KMP A;  1YTP A;  1CT4 I;  4MPI A;  3TO6 A;  2OU2 A;  4B6D A;  1ULK A;  2ELI A;  5EX0 A;  3UGD A;  2NU1 I;  2VRW B;  2KCX A;  3TO7 A;  1IW4 A;  4UXI A;  1S20 A;  1TBN A;  1FAR A;  3TO9 A;  1NUB A;  1K7V A;  2DB6 A;  2J9R A;  4HGU A;  1TGS I;  2L7X A;  3OXG A;  3HH2 C;  1RFH A;  2K9H A;  2NU2 I;  3R5C A;  4JCV E;  1V1H A;  5FUW A;  1WGT A;  2CWF A;  1CGJ I;  2WGC A;  1R0R I;  1UVF A;  2NU3 I;  1SGN I;  1KBE A;  1ULN A;  2FNF X;  3E59 A;  3OL0 A;  2N71 A;  5JHW C;  2PQ8 A;  3UGI A;  2NU0 I;  3BJI A;  1ULM A;  4SGB I;  3SGQ I;  1TBR R;  1PTR A;  1CSO I;  1V1I A;  1Z2I A;  2B8T A;  2CJS C;  2CWH A;  3VE5 A;  1TBO A;  2SGE I;  4WP4 A;  1OVO A;  3SGB I;  1X74 A;  1Y8F A;  1UUC A;  1DS3 I;  1NXU A;  1TBQ R;  2YUU A;  1MJ9 A;  3FSX A;  1P9G A;  1Y1C A;  2DIP A;  2ODD A;  2SGD I;  1LR9 A;  1W3S A;  1MT1 A;  1UVG A;  1HDL A;  1SGR I;  1HPT A;  5EX3 A;  1P9Z A;  1M8C A;  3VDP A;  1HEV A;  1SGQ I;  4E1R A;  2KMQ A;  1FAQ A;  2SGQ I;  5DAE A;  1Y1B A;  1CHO I;  1PJU A;  2SGP I;  3PDN A;  2F3C I;  2B0U C;  3UEY A;  4AML A;  1H0Z A;  3UEJ A;  1R79 A;  2UZ3 A;  1OMU A;  2BUS A;  3QWP A;  3B4V C;  1U5K A;  5CCL A;  3VDU A;  5J8C A;  2P6A C;  3OXF A;  2W0T A;  1TIH A;  1XBT A;  2QQ0 A;  2V53 A;  3QAH A;  3E2I A;  1XX6 A;  1LR7 A;  3UFF A;  2ENN A;  2JZM A;  2M5X A;  2QQD A;  1Q9B A;  2WCY A;  2CWG A;  2OD1 A;  5J8F A;  2WVJ A;  1XA6 A;  4UXJ A;  1Z7K B;  2V1C A;  3R5B A;  3TJQ A;  1SGD I;  2N17 A;  2GIV A;  2ENZ A;  2QPO A;  4E1P A;  1CE3 A;  1FY7 A;  1X4S A;  3KY9 A;  2Y0M A;  2QQC A;  3OXL A;  2YQP A;  3GOX A;  2OVO A;  2E5R A;  4OVO A;  5FUY A;  1IY5 A;  1KBF A;  1PCE A;  1PPF I;  1W4R A;  2L8E A;  5FUX A;  3UOE A;  9WGA A;  2JW6 A;  5E3R A;  1OMT A;  1M8B A;  2JYY A;  1MJA A;  2ORW A;  1BUS A;  1K7U A;  2NU4 I;  2XRC A;  1N13 A;  1TUS A;  4A24 A;  3FSY A;  2GKV A;  1TOT A;  1WGC A;  5CCM A;  2J87 A;  2DKV A;  4UXH A;  4GI3 C;  2JXD A;  2KMO A;  2LEO A;  3R5D A;  2JA1 A;  3MEK A;  4L9M A;  1K7T A;  2X52 A;  1KMA A; 
#chains in the Genus database with same CATH homology
 1HJA I;  2N1A B;  1SGP I;  3D00 A;  2KMR A;  2E73 A;  1CT2 I;  2ARP F;  3SEK C;  1PTQ A;  2A20 A;  3QTL D;  1SGE I;  2SGF I;  1TUR A;  1IY6 A;  3UGL A;  2V1C C;  2N52 A;  1AN1 I;  3FC3 A;  1YU6 C;  4FKD A;  2GKT I;  5FUV A;  2ROW A;  5HI7 A;  1FYB A;  2ORV A;  3OVO A;  1BMO A;  1SGY I;  1CT0 I;  3RU0 A;  3CXL A;  2QQE A;  1VDD A;  1OYV I;  2GVI A;  1DS2 I;  1CGI I;  1LR8 A;  2GKR I;  2ERW A;  5HQ8 A;  2LUY A;  2KMP A;  1YTP A;  1CT4 I;  4B6D A;  2ELI A;  5EX0 A;  3UGD A;  2NU1 I;  2VRW B;  2KCX A;  1IW4 A;  4UXI A;  1TBN A;  1FAR A;  1NUB A;  2DB6 A;  2J9R A;  4HGU A;  1TGS I;  2L7X A;  3OXG A;  3HH2 C;  1RFH A;  2K9H A;  2NU2 I;  4JCV E;  1V1H A;  5FUW A;  1CGJ I;  1R0R I;  1UVF A;  2NU3 I;  1SGN I;  1KBE A;  2FNF X;  3E59 A;  5JHW C;  3OL0 A;  2N71 A;  3UGI A;  2NU0 I;  3BJI A;  4SGB I;  3SGQ I;  1TBR R;  2CJS C;  1PTR A;  1CSO I;  1V1I A;  2B8T A;  3VE5 A;  5CCM A;  1TBO A;  2SGE I;  1OVO A;  3SGB I;  1X74 A;  1Y8F A;  1UUC A;  1DS3 I;  1TBQ R;  2YUU A;  1Y1C A;  2DIP A;  2ODD A;  2SGD I;  1LR9 A;  1W3S A;  1MT1 A;  1UVG A;  1HDL A;  1SGR I;  1HPT A;  5EX3 A;  1M8C A;  3VDP A;  1SGQ I;  4E1R A;  2KMQ A;  1FAQ A;  2SGQ I;  5DAE A;  1Y1B A;  1CHO I;  1PJU A;  2SGP I;  3PDN A;  2F3C I;  2B0U C;  3UEY A;  1H0Z A;  3UEJ A;  1R79 A;  2UZ3 A;  1OMU A;  2BUS A;  3QWP A;  3B4V C;  1U5K A;  5CCL A;  3VDU A;  2P6A C;  3OXF A;  2W0T A;  1TIH A;  1XBT A;  2QQ0 A;  2V53 A;  3E2I A;  1XX6 A;  1LR7 A;  3UFF A;  2ENN A;  2JZM A;  2M5X A;  2QQD A;  2WCY A;  2OD1 A;  2WVJ A;  1XA6 A;  4UXJ A;  1Z7K B;  2V1C A;  3TJQ A;  1SGD I;  2N17 A;  2ENZ A;  2QPO A;  4E1P A;  1CE3 A;  1X4S A;  3KY9 A;  3OXL A;  2QQC A;  2YQP A;  3GOX A;  2OVO A;  2E5R A;  4OVO A;  5FUY A;  1IY5 A;  1KBF A;  1PCE A;  1PPF I;  1W4R A;  2L8E A;  5FUX A;  2JW6 A;  1OMT A;  1M8B A;  2JYY A;  1BUS A;  2ORW A;  2NU4 I;  2XRC A;  1N13 A;  1TUS A;  4A24 A;  2GKV A;  1TOT A;  2J87 A;  4UXH A;  4GI3 C;  2JXD A;  2KMO A;  2LEO A;  2JA1 A;  3MEK A;  4L9M A;  1KMA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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