1H6NA

Formation of a tyrosyl radical intermediate in proteus mirabilis catalase by directed mutagenesis and consequences for nucleotide reactivity
Total Genus 155
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
155
sequence length
476
structure length
475
Chain Sequence
KKLTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFYLRDPLKFPDLNHIVKRDPRTNMRNMAYKWDFFSHLPESLHQLTIDMSDRGLPLSYRFVHGYGSHTYSFINKDNERFWVKFHFRCQQGIKNLMDDEAEALVGKDRESSQRDLFEAIERGDYPRWKLQIQIMPEKEASTVPYNPFDLTKVWPHADYPLMDVGYFELNRNPDNYFSDVEQAAFSPANIVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPKCPFHNYHRDGAMRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQRMFARIAGELSQASKETQQRQIDLFTKVHPEYGAGVEKAIKVLE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase (h2o2 acceptor)
molecule keywords CATALASE
publication title High Resolution Structure and Biochemical Properties of a Recombinant Proteus Mirabilis Catalase Depleted in Iron.
pubmed doi rcsb
source organism Proteus mirabilis
total genus 155
structure length 475
sequence length 476
ec nomenclature ec 1.11.1.6: Catalase.
pdb deposition date 2001-06-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00199 Catalase Catalase
A PF06628 Catalase-rel Catalase-related immune-responsive
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.180.10 Mainly Beta Beta Barrel Catalase HpII, Chain A, domain 1 Catalase core domain 1h6nA00
4QORA 5BV2P 3DY5A 1M7SA 4B5KA 3PQ2A 3ZJ5A 1H6NA 1QF7A 3P9RA 1MQFA 1P7YA 1GWFA 2A9EA 3VU3A 4B31A 1GGEA 2J2MA 3TTVA 4E37A 4B7AA 4BFLA 4ENSA 1CF9A 4CABA 3PQ8A 4QOMA 1GWHA 4ENUA 4QOLA 3PQ4A 1P7ZA 3P9QA 4ENQA 1IPHA 2XF2A 1QWLA 2IQFA 4AUEA 3P9PA 1GGFA 1F4JA 3EJ6A 1U5UA 1HBZA 2ISAA 3PQ5A 3TTTA 2CAGA 3TTUA 4B40A 3TTXA 4ENPA 1SI8A 1QWSA 4ENTA 3P9SA 3PQ3A 4AJ9A 4AUMA 4BIMA 4ENWA 1P81A 4ENVA 4ENRA 4QOOA 2IUFA 1GGHA 3TTWA 4QOPA 4AULA 1A4EA 2XQ1A 3ZJ4A 1P80A 1H7KA 1GG9A 2CAHA 1E93A 3PQ7A 3PQ6A 4QOQA 4AUNA 1GGKA 1NM0A 1GWEA 1M85A 1GGJA 4B2YA 3HB6A 1QWMA 4QONA 1SY7A
chains in the Genus database with same CATH superfamily
4QORA 5BV2P 3DY5A 3J7BA 1DGFA 8CATA 1M7SA 4B5KA 4B7HA 3PQ2A 4BLCA 3ZJ5A 1DGHA 1H6NA 1QF7A 3P9RA 3RGSA 3E4YA 1MQFA 1P7YA 1GWFA 2A9EA 3VU3A 4B31A 1GGEA 2J2MA 3TTVA 4E37A 4B7AA 4BFLA 4ENSA 1CF9A 4CABA 3PQ8A 4QOMA 1GWHA 1DGBA 3RE8A 4QOLA 4ENUA 3PQ4A 1P7ZA 3P9QA 4ENQA 1IPHA 4B7GA 1TH4A 2XF2A 1QWLA 2IQFA 1TGUA 1DGHB 4AUEA 3P9PA 1GGFA 3RGPA 7CATA 1F4JA 3EJ6A 1U5UA 1HBZA 2ISAA 3PQ5A 3TTTA 2CAGA 3TTUA 4B40A 3TTXA 4ENPA 3E4WA 1SI8A 1QWSA 4ENTA 5GKNA 3P9SA 3PQ3A 4AJ9A 4AUMA 4BIMA 4ENWA 4B7FA 1P81A 4ENVA 4ENRA 4QOOA 2IUFA 1GGHA 3TTWA 4QOPA 3NWLA 4AULA 1A4EA 2XQ1A 3ZJ4A 1P80A 1TH2A 1TH3A 1H7KA 1QQWA 1GG9A 2CAHA 1E93A 3PQ7A 3PQ6A 1DGGA 4QOQA 1GGKA 4AUNA 1NM0A 1GWEA 1M85A 1GGJA 4B2YA 3HB6A 1QWMA 4QONA 1SY7A
chains in the Genus database with same CATH topology
4QORA 5BV2P 3DY5A 1M7SA 4B5KA 3PQ2A 3ZJ5A 1H6NA 1QF7A 3P9RA 1MQFA 1P7YA 1GWFA 2A9EA 3VU3A 4B31A 1GGEA 2J2MA 3TTVA 4E37A 4B7AA 4BFLA 4ENSA 1CF9A 4CABA 3PQ8A 4QOMA 1GWHA 4ENUA 4QOLA 3PQ4A 1P7ZA 3P9QA 4ENQA 1IPHA 2XF2A 1QWLA 2IQFA 4AUEA 3P9PA 1GGFA 1F4JA 3EJ6A 1U5UA 1HBZA 2ISAA 3PQ5A 3TTTA 2CAGA 3TTUA 4B40A 3TTXA 4ENPA 1SI8A 1QWSA 4ENTA 3P9SA 3PQ3A 4AJ9A 4AUMA 4BIMA 4ENWA 1P81A 4ENVA 4ENRA 4QOOA 2IUFA 1GGHA 3TTWA 4QOPA 4AULA 1A4EA 2XQ1A 3ZJ4A 1P80A 1H7KA 1GG9A 2CAHA 1E93A 3PQ7A 3PQ6A 4QOQA 4AUNA 1GGKA 1NM0A 1GWEA 1M85A 1GGJA 4B2YA 3HB6A 1QWMA 4QONA 1SY7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4QOR A;  5BV2 P;  3DY5 A;  1M7S A;  4B5K A;  3PQ2 A;  3ZJ5 A;  1H6N A;  1QF7 A;  3P9R A;  1MQF A;  1P7Y A;  1GWF A;  2A9E A;  3VU3 A;  4B31 A;  1GGE A;  2J2M A;  3TTV A;  4E37 A;  4B7A A;  4BFL A;  4ENS A;  1CF9 A;  4CAB A;  3PQ8 A;  4QOM A;  1GWH A;  4ENU A;  4QOL A;  3PQ4 A;  1P7Z A;  3P9Q A;  4ENQ A;  1IPH A;  2XF2 A;  1QWL A;  2IQF A;  4AUE A;  3P9P A;  1GGF A;  1F4J A;  3EJ6 A;  1U5U A;  1HBZ A;  2ISA A;  3PQ5 A;  3TTT A;  2CAG A;  3TTU A;  4B40 A;  3TTX A;  4ENP A;  1SI8 A;  1QWS A;  4ENT A;  3P9S A;  3PQ3 A;  4AJ9 A;  4AUM A;  4BIM A;  4ENW A;  1P81 A;  4ENV A;  4ENR A;  4QOO A;  2IUF A;  1GGH A;  3TTW A;  4QOP A;  4AUL A;  1A4E A;  2XQ1 A;  3ZJ4 A;  1P80 A;  1H7K A;  1GG9 A;  2CAH A;  1E93 A;  3PQ7 A;  3PQ6 A;  4QOQ A;  4AUN A;  1GGK A;  1NM0 A;  1GWE A;  1M85 A;  1GGJ A;  4B2Y A;  3HB6 A;  1QWM A;  4QON A;  1SY7 A; 
#chains in the Genus database with same CATH topology
 4QOR A;  5BV2 P;  3DY5 A;  3J7B A;  1DGF A;  8CAT A;  1M7S A;  4B5K A;  4B7H A;  3PQ2 A;  4BLC A;  3ZJ5 A;  1DGH A;  1H6N A;  1QF7 A;  3P9R A;  3RGS A;  3E4Y A;  1MQF A;  1P7Y A;  1GWF A;  2A9E A;  3VU3 A;  4B31 A;  1GGE A;  2J2M A;  3TTV A;  4E37 A;  4B7A A;  4BFL A;  4ENS A;  1CF9 A;  4CAB A;  3PQ8 A;  4QOM A;  1GWH A;  1DGB A;  3RE8 A;  4QOL A;  4ENU A;  3PQ4 A;  1P7Z A;  3P9Q A;  4ENQ A;  1IPH A;  4B7G A;  1TH4 A;  2XF2 A;  1QWL A;  2IQF A;  1TGU A;  1DGH B;  4AUE A;  3P9P A;  1GGF A;  3RGP A;  7CAT A;  1F4J A;  3EJ6 A;  1U5U A;  1HBZ A;  2ISA A;  3PQ5 A;  3TTT A;  2CAG A;  3TTU A;  4B40 A;  3TTX A;  4ENP A;  3E4W A;  1SI8 A;  1QWS A;  4ENT A;  5GKN A;  3P9S A;  3PQ3 A;  4AJ9 A;  4AUM A;  4BIM A;  4ENW A;  4B7F A;  1P81 A;  4ENV A;  4ENR A;  4QOO A;  2IUF A;  1GGH A;  3TTW A;  4QOP A;  3NWL A;  4AUL A;  1A4E A;  2XQ1 A;  3ZJ4 A;  1P80 A;  1TH2 A;  1TH3 A;  1H7K A;  1QQW A;  1GG9 A;  2CAH A;  1E93 A;  3PQ7 A;  3PQ6 A;  1DGG A;  4QOQ A;  1GGK A;  4AUN A;  1NM0 A;  1GWE A;  1M85 A;  1GGJ A;  4B2Y A;  3HB6 A;  1QWM A;  4QON A;  1SY7 A; 
#chains in the Genus database with same CATH homology
 4QOR A;  5BV2 P;  3DY5 A;  1M7S A;  4B5K A;  3PQ2 A;  3ZJ5 A;  1H6N A;  1QF7 A;  3P9R A;  1MQF A;  1P7Y A;  1GWF A;  2A9E A;  3VU3 A;  4B31 A;  1GGE A;  2J2M A;  3TTV A;  4E37 A;  4B7A A;  4BFL A;  4ENS A;  1CF9 A;  4CAB A;  3PQ8 A;  4QOM A;  1GWH A;  4ENU A;  4QOL A;  3PQ4 A;  1P7Z A;  3P9Q A;  4ENQ A;  1IPH A;  2XF2 A;  1QWL A;  2IQF A;  4AUE A;  3P9P A;  1GGF A;  1F4J A;  3EJ6 A;  1U5U A;  1HBZ A;  2ISA A;  3PQ5 A;  3TTT A;  2CAG A;  3TTU A;  4B40 A;  3TTX A;  4ENP A;  1SI8 A;  1QWS A;  4ENT A;  3P9S A;  3PQ3 A;  4AJ9 A;  4AUM A;  4BIM A;  4ENW A;  1P81 A;  4ENV A;  4ENR A;  4QOO A;  2IUF A;  1GGH A;  3TTW A;  4QOP A;  4AUL A;  1A4E A;  2XQ1 A;  3ZJ4 A;  1P80 A;  1H7K A;  1GG9 A;  2CAH A;  1E93 A;  3PQ7 A;  3PQ6 A;  4QOQ A;  4AUN A;  1GGK A;  1NM0 A;  1GWE A;  1M85 A;  1GGJ A;  4B2Y A;  3HB6 A;  1QWM A;  4QON A;  1SY7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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