1HD5A

Endoglucanase from humicola insolens at 1.7a resolution
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
210
structure length
205
Chain Sequence
ADGKSTRYWDCCKPSCGWAKKAPVNQPVFSCNANFQRLTDFDAKSGCEPGGVAYSCADQTPWAVNDDFAFGFAATSIAGSNEAGWCCACYELTFTSGPVAGKKMVVQSTSTSNHFDLNIPGGGVGIFDGCTPQFGGLPGQRYGGISSRNECDRFPDALKPGCYWRFDWFKNADNPSFSFRQVQCPAELVARTGCRRNDDGNFPAV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords ENDOGLUCANASE
publication title Endoglucanase from Humicola Insolens at 1.7A Resolution
rcsb
total genus 64
structure length 205
sequence length 210
ec nomenclature ec 3.2.1.4: Cellulase.
pdb deposition date 2000-11-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02015 Glyco_hydro_45 Glycosyl hydrolase family 45
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 1hd5A00
3SUMA 2G6GA 1N10A 3SUKA 2PICA 3X2HA 3X2OA 4L48A 3SUJA 3CZBA 3ENGA 5H4UA 3X2PA 4ENGA 4JCWA 2PI8A 3M3GA 4AVRA 1WC2A 3D30A 3X2IA 1BW3A 3X2GA 4JP6A 3X2NA 4JP7A 5GLXA 1OA9A 1BW4A 4JS7A 4FFTA 1HD5A 2KQAA 4FG2A 1OA7A 2BH0A 2AE0X 4ZM7A 5GM9A 2HCZX 3SULA 1L8FA 5GLYA 3X2JA 3X2MA 2ENGA 3X2LA 3X2KA 2G5DA 4FG4A 2PJJA 4JJOA 2PNWA 4FERA 2GAEA
chains in the Genus database with same CATH superfamily
4CRYG 3SUMA 2G6GA 3HKZA 4AONB 1YLEA 5GLFA 1Y1VA 3SUJA 5FTLA 2YU9A 1UHEA 1PYQA 3CF2A 3X2PA 4ENGA 1PQHA 3GTQA 1KQFA 5FTKA 1TMOA 1UHDA 3HU2A 1WC2A 5DYGA 1PQEA 3X2IA 1DMSA 4AZDA 5C1BA 3TM7B 3X2NA 1I3QA 1EU1A 2NAPA 3GTLA 1BW4A 1BW3A 4JS7A 2BE5D 2R7ZA 1AW8B 1E18A 2BH0A 3FKIA 3QC8A 4DMRA 1FDIA 5GM9A 2HCZX 1PT0A 3OUGA 2IV2X 3X2JA 2DMRA 2NVYA 2E2HA 1DMRA 1E32A 5FTMA 3X2KA 1TWFA 2R93A 2PJJA 5FTNA 5DYIA 1R9TA 3GTPA 2JA7A 1N10A 3X2OA 1VC3B 2E7ZA 2WB1A 3TIWA 4AYBA 1G8KA 1OGYA 4JCWA 3GTJA 4KDLA 3IR7A 3GTGA 1R27A 2WAQA 4D7ZB 1QDNA 2A6ED 1SFOA 2O5JD 4JP7A 1OA9A 3QWZA 3IR5A 2JIPA 2NYAA 1OA7A 4FG2A 5FTJA 1TWGA 1CZ4A 5T5MD 2KI8A 3SULA 4RV0A 1L8FA 1G8JA 5GLYA 1Q16A 5C18A 3X2LA 1ZYRD 2G5DA 4GA6A 3HU3A 3GTMA 2PNWA 2GAEA 2JA6A 1Y1WA 2JIQA 2A69D 3X2HA 3SUKA 4KDIA 3O5AA 3QQ8A 3ENGA 5H4UA 2PI8A 3GTOA 1AA6A 3DMRA 1PQFA 1WCMA 4FERA 1S3SA 1ZC1A 4JP6A 4KLNA 1CZ5A 4AOKB 4FFTA 4KODA 1TWHA 2KQAA 2EEOB 2A6HD 1SMYD 2JIOA 1YNJD 1FDOA 2NVXA 3CQZA 2VPWA 2JIRA 2VPXA 2Y0SA 1YNND 1PYUB 2V3VA 2JIMA 3GTKA 1KQGA 1E5VA 3X2MA 2B63A 1Y4ZA 4KO8A 4C2MA 2VUMA 2JA5A 2A68D 2VPZA 5EPPA 2R92A 2PICA 3QQ7A 1PT1A 4L48A 2PMZA 3ML1A 3CZBA 5B6CA 1PPYA 1E60A 1R7RA 3H0GA 3M3GA 1QCSA 2YUJA 4QIWA 1Y5IA 1SIWA 4AVRA 3D30A 3IR6A 4GA5A 1E61A 2V45A 1IW7D 2PJHB 3X2GA 4CRZA 1I50A 2E2IA 5GLXA 1CR5A 2CW0D 1TWAA 5T5ID 1K83A 2AE0X 4ZM7A 4CS0A 1H0HA 3HU1A 2C45A 3PLXB 2ENGA 4AAYA 4NOHA 4FG4A 1H5NA 4JJOA 1TWCA 1WLFA 2VPYA 1HD5A
chains in the Genus database with same CATH topology
3SUMA 2G6GA 1N10A 3SUKA 2PICA 3X2HA 3X2OA 4L48A 3SUJA 3CZBA 3ENGA 5H4UA 3X2PA 4ENGA 4JCWA 2PI8A 3M3GA 4AVRA 1WC2A 3D30A 3X2IA 1BW3A 3X2GA 4JP6A 3X2NA 4JP7A 5GLXA 1OA9A 1BW4A 4JS7A 4FFTA 1HD5A 2KQAA 4FG2A 1OA7A 2BH0A 2AE0X 4ZM7A 5GM9A 2HCZX 3SULA 1L8FA 5GLYA 3X2JA 3X2MA 2ENGA 3X2LA 3X2KA 2G5DA 4FG4A 2PJJA 4JJOA 2PNWA 4FERA 2GAEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3SUM A;  2G6G A;  1N10 A;  3SUK A;  2PIC A;  3X2H A;  3X2O A;  4L48 A;  3SUJ A;  3CZB A;  3ENG A;  5H4U A;  3X2P A;  4ENG A;  4JCW A;  2PI8 A;  3M3G A;  4AVR A;  1WC2 A;  3D30 A;  3X2I A;  1BW3 A;  3X2G A;  4JP6 A;  3X2N A;  4JP7 A;  5GLX A;  1OA9 A;  1BW4 A;  4JS7 A;  4FFT A;  1HD5 A;  2KQA A;  4FG2 A;  1OA7 A;  2BH0 A;  2AE0 X;  4ZM7 A;  5GM9 A;  2HCZ X;  3SUL A;  1L8F A;  5GLY A;  3X2J A;  3X2M A;  2ENG A;  3X2L A;  3X2K A;  2G5D A;  4FG4 A;  2PJJ A;  4JJO A;  2PNW A;  4FER A;  2GAE A; 
#chains in the Genus database with same CATH topology
 4CRY G;  3SUM A;  2G6G A;  3HKZ A;  4AON B;  1YLE A;  5GLF A;  1Y1V A;  3SUJ A;  5FTL A;  2YU9 A;  1UHE A;  1PYQ A;  3CF2 A;  3X2P A;  4ENG A;  1PQH A;  3GTQ A;  1KQF A;  5FTK A;  1TMO A;  1UHD A;  3HU2 A;  1WC2 A;  5DYG A;  1PQE A;  3X2I A;  1DMS A;  4AZD A;  5C1B A;  3TM7 B;  3X2N A;  1I3Q A;  1EU1 A;  2NAP A;  3GTL A;  1BW4 A;  1BW3 A;  4JS7 A;  2BE5 D;  2R7Z A;  1AW8 B;  1E18 A;  2BH0 A;  3FKI A;  3QC8 A;  4DMR A;  1FDI A;  5GM9 A;  2HCZ X;  1PT0 A;  3OUG A;  2IV2 X;  3X2J A;  2DMR A;  2NVY A;  2E2H A;  1DMR A;  1E32 A;  5FTM A;  3X2K A;  1TWF A;  2R93 A;  2PJJ A;  5FTN A;  5DYI A;  1R9T A;  3GTP A;  2JA7 A;  1N10 A;  3X2O A;  1VC3 B;  2E7Z A;  2WB1 A;  3TIW A;  4AYB A;  1G8K A;  1OGY A;  4JCW A;  3GTJ A;  4KDL A;  3IR7 A;  3GTG A;  1R27 A;  2WAQ A;  4D7Z B;  1QDN A;  2A6E D;  1SFO A;  2O5J D;  4JP7 A;  1OA9 A;  3QWZ A;  3IR5 A;  2JIP A;  2NYA A;  1OA7 A;  4FG2 A;  5FTJ A;  1TWG A;  1CZ4 A;  5T5M D;  2KI8 A;  3SUL A;  4RV0 A;  1L8F A;  1G8J A;  5GLY A;  1Q16 A;  5C18 A;  3X2L A;  1ZYR D;  2G5D A;  4GA6 A;  3HU3 A;  3GTM A;  2PNW A;  2GAE A;  2JA6 A;  1Y1W A;  2JIQ A;  2A69 D;  3X2H A;  3SUK A;  4KDI A;  3O5A A;  3QQ8 A;  3ENG A;  5H4U A;  2PI8 A;  3GTO A;  1AA6 A;  3DMR A;  1PQF A;  1WCM A;  4FER A;  1S3S A;  1ZC1 A;  4JP6 A;  4KLN A;  1CZ5 A;  4AOK B;  4FFT A;  4KOD A;  1TWH A;  2KQA A;  2EEO B;  2A6H D;  1SMY D;  2JIO A;  1YNJ D;  1FDO A;  2NVX A;  3CQZ A;  2VPW A;  2JIR A;  2VPX A;  2Y0S A;  1YNN D;  1PYU B;  2V3V A;  2JIM A;  3GTK A;  1KQG A;  1E5V A;  3X2M A;  2B63 A;  1Y4Z A;  4KO8 A;  4C2M A;  2VUM A;  2JA5 A;  2A68 D;  2VPZ A;  5EPP A;  2R92 A;  2PIC A;  3QQ7 A;  1PT1 A;  4L48 A;  2PMZ A;  3ML1 A;  3CZB A;  5B6C A;  1PPY A;  1E60 A;  1R7R A;  3H0G A;  3M3G A;  1QCS A;  2YUJ A;  4QIW A;  1Y5I A;  1SIW A;  4AVR A;  3D30 A;  3IR6 A;  4GA5 A;  1E61 A;  2V45 A;  1IW7 D;  2PJH B;  3X2G A;  4CRZ A;  1I50 A;  2E2I A;  5GLX A;  1CR5 A;  2CW0 D;  1TWA A;  5T5I D;  1K83 A;  2AE0 X;  4ZM7 A;  4CS0 A;  1H0H A;  3HU1 A;  2C45 A;  3PLX B;  2ENG A;  4AAY A;  4NOH A;  4FG4 A;  1H5N A;  4JJO A;  1TWC A;  1WLF A;  2VPY A;  1HD5 A; 
#chains in the Genus database with same CATH homology
 3SUM A;  2G6G A;  1N10 A;  3SUK A;  2PIC A;  3X2H A;  3X2O A;  4L48 A;  3SUJ A;  3CZB A;  3ENG A;  5H4U A;  3X2P A;  4ENG A;  4JCW A;  2PI8 A;  3M3G A;  4AVR A;  1WC2 A;  3D30 A;  3X2I A;  1BW3 A;  3X2G A;  4JP6 A;  3X2N A;  4JP7 A;  5GLX A;  1OA9 A;  1BW4 A;  4JS7 A;  4FFT A;  1HD5 A;  2KQA A;  4FG2 A;  1OA7 A;  2BH0 A;  2AE0 X;  4ZM7 A;  5GM9 A;  2HCZ X;  3SUL A;  1L8F A;  5GLY A;  3X2J A;  3X2M A;  2ENG A;  3X2L A;  3X2K A;  2G5D A;  4FG4 A;  2PJJ A;  4JJO A;  2PNW A;  4FER A;  2GAE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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