1JW2A

Solution structure of hemolysin expression modulating protein hha from escherichia coli. ontario centre for structural proteomics target ec0308_1_72; northeast structural genomics target et88
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
72
structure length
72
Chain Sequence
MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Gene regulation
molecule keywords HEMOLYSIN EXPRESSION MODULATING PROTEIN Hha
publication title An NMR approach to structural proteomics
pubmed doi rcsb
source organism Escherichia coli
total genus 22
structure length 72
sequence length 72
ec nomenclature
pdb deposition date 2001-09-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF05321 HHA Haemolysin expression modulating protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.40 Mainly Alpha Up-down Bundle Monooxygenase HHA 1jw2A00
1JW2A 2JQTA 4ICGC 2MW2A 2K5SA
chains in the Genus database with same CATH superfamily
3N1EA 4RNGA 1LDKE 2JPNA 4FJKA 2P1QB 3QESA 4DTSA 2P1NB 4FJJA 1XU5E 4DU3A 4FJ9A 4M41A 3TAFA 3L1NA 1JW2A 3LDBA 3QEPA 2LF6A 1XVGE 3UIQA 3TAGA 4DTNA 3TAEA 4FJHA 3BVOA 3RMBA 3SUQA 4E3SA 4HCBA 4I9QA 4ADNA 3NAEA 3SUOA 3SNNA 4J2BA 4IT5A 4M3TA 5IREA 1FYZE 2P5OA 2P1PB 5IZ7A 3QEVA 3SI6A 2OZSA 1FZ1E 2HD0A 3OGMB 4AKGA 3QEWA 3QNNA 3KD1E 2QXFA 4EYWA 2B1EA 3C95A 4EPHA 4J2EA 4AKHA 3SQ2A 2FYOA 1XU3E 4GAMC 4FK2A 2RKHA 2VJ5A 4M3YA 4AI6A 2P1MB 3LZIA 3CQ8A 2PFVA 2MW2A 4JS4A 4ADOA 4M3WA 4E4BA 4M3UA 1NEXB 3SQ0A 1XMFE 2JH8A 1N1CA 4DU4A 1WAJA 5H37A 1XVDE 3C6OB 3UO3A 3V7DB 4RG8A 4DU1A 3QEIA 1FZ9E 4FJ8A 4KHQA 4X5NA 1XVEE 3E4WA 4FJMA 5IBKB 2YB5A 4M3XA 4HCCA 4FJ5A 4I9LA 1XL3C 4KHWA 3KD5E 3RMAA 3OGLB 1XVCE 4KI6A 1MMOG 3CFPA 3QEXA 2OVPB 1FZ8E 2OVRB 3SVIA 1IG9A 4KHSA 1MTYG 4RL5A 4KHYA 2OZMA 1XVBE 1XVFE 2JHAA 2MZWB 3HGKE 4FJ7A 3K2OA 3WSOA 3TABA 2LF3A 2OVQB 4QNCA 3QNOA 1FZ6E 1FZIE 1WAFA 1FZ3E 3NCIA 2DY4A 3HP9A 2JQTA 3L2OB 3C94A 4ICGC 4QNDA 2K5SA 3TL8B 1FS1A 4KHUA 4M42A 2P5GA 1FPOA 3HL8A 2PFTA 2RCUA 3SQ4A 1FZ7E 2VIXA 3J2PA 3N1BA 4J2AA 4DTJA 3RWUA 1FZ4E 1FZ5E 2JHPA 4M3RA 2ATQA 4FJXA 4FJNA 2DTUA 1MHYG 3SJJA 3TJYA 1XMHE 1CLQA 2B7MA 3E4YA 3S9HA 3SPYA 4DTRA 3QETA 4KI4A 3L0MA 3RMDA 3NGIA 4J2DA 4FVMA 2MMBA 4M3ZA 4I6JB 1FZHE 4B08A 4DTMA 2H4TA 3CFOA 3SQ1A 4DTXA 3SPZA 2FW3A 1Q9YA 3NHGA 1XMGE 3OGKB 1FZ0E 4EP9A 1P22A 4FJGA 4M45A 4FJIA 4DTPA 4JS5A 3SCXA 2OYQA 4JRQA 4FK4A 2P1OB 3SUNA 2B8IA 3NE6A 2JHCA 3LD8A 3MKSB 4JRPA 1Q9XA 3C6PB 4FJLA 4X5MA 2VJ4A 4DTUA 4KHNA 3QERA 1IH7A 2JH9A 3UO2A 3J27A 3LDSA 3SUPA 2DEBA 3HGLA 2E31A 3LZJA 1FXXA 1FZ2E 4FK0A 3RMCA 2E32A 4DTOA 4AKIA 3C6NB 3CFRA 1MHZG 3NDKA 3L8BA
chains in the Genus database with same CATH topology
1JW2A 2JQTA 4ICGC 2MW2A 2K5SA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1JW2 A;  2JQT A;  4ICG C;  2MW2 A;  2K5S A; 
#chains in the Genus database with same CATH topology
 3N1E A;  4RNG A;  1LDK E;  2JPN A;  4FJK A;  2P1Q B;  3QES A;  4DTS A;  2P1N B;  4FJJ A;  1XU5 E;  4DU3 A;  4FJ9 A;  4M41 A;  3TAF A;  3L1N A;  1JW2 A;  3LDB A;  3QEP A;  2LF6 A;  1XVG E;  3UIQ A;  3TAG A;  4DTN A;  3TAE A;  4FJH A;  3BVO A;  3RMB A;  3SUQ A;  4E3S A;  4HCB A;  4I9Q A;  4ADN A;  3NAE A;  3SUO A;  3SNN A;  4J2B A;  4IT5 A;  4M3T A;  5IRE A;  1FYZ E;  2P5O A;  2P1P B;  5IZ7 A;  3QEV A;  3SI6 A;  2OZS A;  1FZ1 E;  2HD0 A;  3OGM B;  4AKG A;  3QEW A;  3QNN A;  3KD1 E;  2QXF A;  4EYW A;  2B1E A;  3C95 A;  4EPH A;  4J2E A;  4AKH A;  3SQ2 A;  2FYO A;  1XU3 E;  4GAM C;  4FK2 A;  2RKH A;  2VJ5 A;  4M3Y A;  4AI6 A;  2P1M B;  3LZI A;  3CQ8 A;  2PFV A;  2MW2 A;  4JS4 A;  4ADO A;  4M3W A;  4E4B A;  4M3U A;  1NEX B;  3SQ0 A;  1XMF E;  2JH8 A;  1N1C A;  4DU4 A;  1WAJ A;  5H37 A;  1XVD E;  3C6O B;  3UO3 A;  3V7D B;  4RG8 A;  4DU1 A;  3QEI A;  1FZ9 E;  4FJ8 A;  4KHQ A;  4X5N A;  1XVE E;  3E4W A;  4FJM A;  5IBK B;  2YB5 A;  4M3X A;  4HCC A;  4FJ5 A;  4I9L A;  1XL3 C;  4KHW A;  3KD5 E;  3RMA A;  3OGL B;  1XVC E;  4KI6 A;  1MMO G;  3CFP A;  3QEX A;  2OVP B;  1FZ8 E;  2OVR B;  3SVI A;  1IG9 A;  4KHS A;  1MTY G;  4RL5 A;  4KHY A;  2OZM A;  1XVB E;  1XVF E;  2JHA A;  2MZW B;  3HGK E;  4FJ7 A;  3K2O A;  3WSO A;  3TAB A;  2LF3 A;  2OVQ B;  4QNC A;  3QNO A;  1FZ6 E;  1FZI E;  1WAF A;  1FZ3 E;  3NCI A;  2DY4 A;  3HP9 A;  2JQT A;  3L2O B;  3C94 A;  4ICG C;  4QND A;  2K5S A;  3TL8 B;  1FS1 A;  4KHU A;  4M42 A;  2P5G A;  1FPO A;  3HL8 A;  2PFT A;  2RCU A;  3SQ4 A;  1FZ7 E;  2VIX A;  3J2P A;  3N1B A;  4J2A A;  4DTJ A;  3RWU A;  1FZ4 E;  1FZ5 E;  2JHP A;  4M3R A;  2ATQ A;  4FJX A;  4FJN A;  2DTU A;  1MHY G;  3SJJ A;  3TJY A;  1XMH E;  1CLQ A;  2B7M A;  3E4Y A;  3S9H A;  3SPY A;  4DTR A;  3QET A;  4KI4 A;  3L0M A;  3RMD A;  3NGI A;  4J2D A;  4FVM A;  2MMB A;  4M3Z A;  4I6J B;  1FZH E;  4B08 A;  4DTM A;  2H4T A;  3CFO A;  3SQ1 A;  4DTX A;  3SPZ A;  2FW3 A;  1Q9Y A;  3NHG A;  1XMG E;  3OGK B;  1FZ0 E;  4EP9 A;  1P22 A;  4FJG A;  4M45 A;  4FJI A;  4DTP A;  4JS5 A;  3SCX A;  2OYQ A;  4JRQ A;  4FK4 A;  2P1O B;  3SUN A;  2B8I A;  3NE6 A;  2JHC A;  3LD8 A;  3MKS B;  4JRP A;  1Q9X A;  3C6P B;  4FJL A;  4X5M A;  2VJ4 A;  4DTU A;  4KHN A;  3QER A;  1IH7 A;  2JH9 A;  3UO2 A;  3J27 A;  3LDS A;  3SUP A;  2DEB A;  3HGL A;  2E31 A;  3LZJ A;  1FXX A;  1FZ2 E;  4FK0 A;  3RMC A;  2E32 A;  4DTO A;  4AKI A;  3C6N B;  3CFR A;  1MHZ G;  3NDK A;  3L8B A; 
#chains in the Genus database with same CATH homology
 1JW2 A;  2JQT A;  4ICG C;  2MW2 A;  2K5S A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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