1PPFI

X-ray crystal structure of the complex of human leukocyte elastase (pmn elastase) and the third domain of the turkey ovomucoid inhibitor
Total Genus 13
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
56
structure length
56
Chain Sequence
LAAVSVDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
molecule keywords HUMAN LEUKOCYTE ELASTASE
publication title X-ray crystal structure of the complex of human leukocyte elastase (PMN elastase) and the third domain of the turkey ovomucoid inhibitor.
pubmed rcsb
source organism Homo sapiens
total genus 13
structure length 56
sequence length 56
ec nomenclature
pdb deposition date 1991-10-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1ppfI00
2SGFI 1TGSI 1SGYI 4GI3C 2ARPF 2QQDA 2NU3I 1BUSA 2F3CI 3B4VC 5DAEA 1UVGA 2WCYA 4HGUA 4SGBI 2M5XA 2JYYA 2V53A 2OVOA 2NU2I 1PCEA 4OVOA 1PJUA 1SGEI 1YU6C 1SGDI 1CGII 1SGPI 1SGRI 1UVFA 1IY6A 1H0ZA 2NU1I 1IY5A 1CSOI 2KMOA 1BMOA 2ERWA 2N71A 1CT0I 3OVOA 2LEOA 1DS2I 1Y1BA 3HH2C 1HPTA 2GKTI 2JXDA 1HDLA 2QQCA 2SGDI 1OMTA 1UUCA 1FYBA 3QTLD 1DS3I 2B0UC 1NUBA 1TBQR 1CE3A 1SGNI 1HJAI 2P6AC 2KMPA 2GKVA 1SGQI 2KMQA 1LR7A 3SEKC 1N13A 2KCXA 1OYVI 1CGJI 1CT4I 1CT2I 1IW4A 1AN1I 2SGEI 3SGQI 2GKRI 1YTPA 2JZMA 2BUSA 2NU0I 2N17A 1TBRR 1R0RI 2SGQI 1OMUA 1M8BA 2SGPI 1Y1CA 1OVOA 1MT1A 2XRCA 1LR8A 3TJQA 1M8CA 1Z7KB 1LR9A 2KMRA 3SGBI 1TIHA 5JHWC 1CHOI 1TUSA 1TURA 2N52A 1PPFI 1KMAA 2NU4I
chains in the Genus database with same CATH superfamily
2SGFI 1TGSI 1MJ9A 2WVJA 4DNCA 4AMLA 1SGYI 2L7XA 2JW6A 2E73A 4GI3C 4MPIA 2ARPF 3UGIA 2QQDA 2NU3I 1PTQA 2ELIA 4JCVE 3RU0A 3UGLA 1BUSA 2ROWA 2F3CI 1ULNA 1U5KA 3B4VC 1XX6A 5DAEA 1MJAA 1UVGA 3OXFA 3E59A 1UHAA 2WCYA 3E2IA 4HGUA 4SGBI 4A24A 2M5XA 2JYYA 2K9HA 1KMAA 1Q9BA 2V53A 2GIVA 2OVOA 3R5CA 2NU2I 1PCEA 3TO7A 2OZUA 4OVOA 3OXGA 1PJUA 1SGEI 1PTRA 2QPOA 3GOXA 1W3SA 1W4RA 1YU6C 2RIJA 1SGDI 1ULKA 1CGII 1SGPI 1SGRI 2YUUA 3CXLA 3TOBA 1XBTA 1FAQA 2JA1A 2FNFX 1UVFA 4FKDA 1IY6A 1K7VA 2QQ0A 1H0ZA 5E3PA 3TO6A 1X4SA 1P9ZA 3TOAA 2Y0MA 2NU1I 5CCLA 1CSOI 1FY7A 1XA6A 2CWHA 2KMOA 1IY5A 1VDDA 1BMOA 2LB7A 2ERWA 2N71A 1CT0I 1WKXA 3VDPA 3OVOA 3OXLA 3OL0A 9WGAA 2OU2A 2LEOA 2UVOA 1DS2I 3UFFA 1TBNA 1V1HA 1Y1BA 3UOEA 3HH2C 1S20A 3TO9A 1HPTA 2GKTI 2JXDA 3R5BA 1HDLA 5FUYA 2QQCA 3VDUA 2SGDI 3MEKA 1OMTA 1R79A 1UUCA 1FYBA 1V1IA 3QTLD 1WTJA 1DS3I 2CWGA 2B0UC 5EX3A 4E1RA 1TOTA 2ODDA 2V1CC 3FSYA 5E3RA 1NUBA 1TBQR 5HI7A 3D00A 3FSXA 1SGNI 2ENZA 1CE3A 2L8EA 1HJAI 1Y8FA 2E5RA 2P6AC 7WGAA 2DIPA 2ORVA 5HQ8A 1NXUA 2UZ3A 2J9RA 2CJSC 2ENNA 1HEVA 2KMPA 5FUXA 1P9GA 2GKVA 1SGQI 2J87A 2KMQA 3PDNA 3UGDA 3UEJA 1LR7A 4E1PA 5J8CA 4L9MA 1N13A 2KCXA 2LUYA 3KY9A 3SEKC 1OYVI 1CGJI 2CWFA 1CT4I 1CT2I 1IW4A 1AN1I 2SGEI 3SGQI 5CCMA 1FARA 4UXIA 2GKRI 1YTPA 1RFHA 5FUVA 1MJBA 1X74A 1K7UA 4WP4A 2JZMA 2BUSA 2GVIA 2NU0I 2N17A 2ORWA 1TBRR 2PQ8A 2W0TA 2X3TA 5J8FA 1R0RI 2A20A 2SGQI 1OMUA 2QQEA 2V1CA 1M8BA 1WGCA 5EX0A 2WGCA 2SGPI 2DB6A 1WGTA 1Y1CA 3QWPA 1OVOA 1ULMA 1MT1A 2XRCA 1LR8A 3R5AA 3R5DA 2DKVA 5FUWA 3TJQA 1TBOA 4B6DA 1K7TA 2OD1A 1M8CA 1Z7KB 1KBEA 2B8TA 4UXHA 1LR9A 2VRWB 2KMRA 2RC4A 3BJIA 2N1AB 5E3QA 1TIHA 3SGBI 3VE5A 5JHWC 2X52A 1KBFA 3FC3A 1CHOI 1TUSA 1TURA 2N52A 2YQPA 3UEYA 1Z2IA 1PPFI 3QAHA 4UXJA 2NU4I
chains in the Genus database with same CATH topology
2SGFI 1TGSI 2WVJA 1SGYI 2L7XA 2JW6A 2E73A 4GI3C 3UGIA 2ARPF 2QQDA 2NU3I 1PTQA 2ELIA 4JCVE 3RU0A 3UGLA 1BUSA 2ROWA 2F3CI 3B4VC 1U5KA 1XX6A 5DAEA 1UVGA 3OXFA 3E59A 2WCYA 3E2IA 4HGUA 4SGBI 4A24A 2M5XA 2JYYA 2K9HA 1KMAA 2V53A 2OVOA 2NU2I 1PCEA 4OVOA 3OXGA 1PJUA 1SGEI 1PTRA 2QPOA 3GOXA 1W3SA 1W4RA 1YU6C 1SGDI 1CGII 1SGPI 1SGRI 2YUUA 3CXLA 1XBTA 1FAQA 2JA1A 2FNFX 1UVFA 4FKDA 1IY6A 2QQ0A 1H0ZA 1X4SA 2NU1I 5CCLA 1CSOI 1IY5A 1XA6A 2KMOA 1VDDA 1BMOA 2ERWA 2N71A 1CT0I 3VDPA 3OVOA 3OXLA 3OL0A 2LEOA 3UFFA 1DS2I 1TBNA 1V1HA 1Y1BA 3HH2C 1HPTA 2GKTI 2JXDA 1HDLA 5FUYA 2QQCA 3VDUA 2SGDI 3MEKA 1OMTA 1R79A 1UUCA 1FYBA 1V1IA 3QTLD 1DS3I 5EX3A 2B0UC 4E1RA 1TOTA 2ODDA 2V1CC 1NUBA 1TBQR 5HI7A 3D00A 1CE3A 1SGNI 2ENZA 2L8EA 1HJAI 1Y8FA 2E5RA 2P6AC 2DIPA 2ORVA 5HQ8A 2UZ3A 2J9RA 2CJSC 2ENNA 2KMPA 5FUXA 3UGDA 2GKVA 1SGQI 2J87A 2KMQA 3PDNA 4E1PA 3UEJA 1LR7A 3SEKC 1N13A 2KCXA 2LUYA 3KY9A 1OYVI 1CGJI 1CT4I 1CT2I 1IW4A 1AN1I 2SGEI 3SGQI 5CCMA 1FARA 4UXIA 2GKRI 1YTPA 1RFHA 5FUVA 1X74A 2JZMA 2BUSA 2GVIA 2NU0I 2N17A 2ORWA 1TBRR 4L9MA 2W0TA 1R0RI 2A20A 2SGQI 1OMUA 2QQEA 2V1CA 1M8BA 5EX0A 2SGPI 2DB6A 1Y1CA 3QWPA 1OVOA 1MT1A 2XRCA 1LR8A 3TJQA 5FUWA 1TBOA 4B6DA 2OD1A 1M8CA 1Z7KB 1KBEA 2B8TA 4UXHA 1LR9A 2VRWB 2KMRA 3BJIA 2N1AB 3SGBI 1TIHA 3VE5A 5JHWC 1KBFA 3FC3A 1CHOI 1TUSA 1TURA 2N52A 2YQPA 3UEYA 1PPFI 4UXJA 2NU4I
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2SGF I;  1TGS I;  1SGY I;  4GI3 C;  2ARP F;  2QQD A;  2NU3 I;  1BUS A;  2F3C I;  3B4V C;  5DAE A;  1UVG A;  2WCY A;  4HGU A;  4SGB I;  2M5X A;  2JYY A;  2V53 A;  2OVO A;  2NU2 I;  1PCE A;  4OVO A;  1PJU A;  1SGE I;  1YU6 C;  1SGD I;  1CGI I;  1SGP I;  1SGR I;  1UVF A;  1IY6 A;  1H0Z A;  2NU1 I;  1IY5 A;  1CSO I;  2KMO A;  1BMO A;  2ERW A;  2N71 A;  1CT0 I;  3OVO A;  2LEO A;  1DS2 I;  1Y1B A;  3HH2 C;  1HPT A;  2GKT I;  2JXD A;  1HDL A;  2QQC A;  2SGD I;  1OMT A;  1UUC A;  1FYB A;  3QTL D;  1DS3 I;  2B0U C;  1NUB A;  1TBQ R;  1CE3 A;  1SGN I;  1HJA I;  2P6A C;  2KMP A;  2GKV A;  1SGQ I;  2KMQ A;  1LR7 A;  3SEK C;  1N13 A;  2KCX A;  1OYV I;  1CGJ I;  1CT4 I;  1CT2 I;  1IW4 A;  1AN1 I;  2SGE I;  3SGQ I;  2GKR I;  1YTP A;  2JZM A;  2BUS A;  2NU0 I;  2N17 A;  1TBR R;  1R0R I;  2SGQ I;  1OMU A;  1M8B A;  2SGP I;  1Y1C A;  1OVO A;  1MT1 A;  2XRC A;  1LR8 A;  3TJQ A;  1M8C A;  1Z7K B;  1LR9 A;  2KMR A;  3SGB I;  1TIH A;  5JHW C;  1CHO I;  1TUS A;  1TUR A;  2N52 A;  1PPF I;  1KMA A;  2NU4 I; 
#chains in the Genus database with same CATH topology
 2SGF I;  1TGS I;  1MJ9 A;  2WVJ A;  4DNC A;  4AML A;  1SGY I;  2L7X A;  2JW6 A;  2E73 A;  4GI3 C;  4MPI A;  2ARP F;  3UGI A;  2QQD A;  2NU3 I;  1PTQ A;  2ELI A;  4JCV E;  3RU0 A;  3UGL A;  1BUS A;  2ROW A;  2F3C I;  1ULN A;  1U5K A;  3B4V C;  1XX6 A;  5DAE A;  1MJA A;  1UVG A;  3OXF A;  3E59 A;  1UHA A;  2WCY A;  3E2I A;  4HGU A;  4SGB I;  4A24 A;  2M5X A;  2JYY A;  2K9H A;  1KMA A;  1Q9B A;  2V53 A;  2GIV A;  2OVO A;  3R5C A;  2NU2 I;  1PCE A;  3TO7 A;  2OZU A;  4OVO A;  3OXG A;  1PJU A;  1SGE I;  1PTR A;  2QPO A;  3GOX A;  1W3S A;  1W4R A;  1YU6 C;  2RIJ A;  1SGD I;  1ULK A;  1CGI I;  1SGP I;  1SGR I;  2YUU A;  3CXL A;  3TOB A;  1XBT A;  1FAQ A;  2JA1 A;  2FNF X;  1UVF A;  4FKD A;  1IY6 A;  1K7V A;  2QQ0 A;  1H0Z A;  5E3P A;  3TO6 A;  1X4S A;  1P9Z A;  3TOA A;  2Y0M A;  2NU1 I;  5CCL A;  1CSO I;  1FY7 A;  1XA6 A;  2CWH A;  2KMO A;  1IY5 A;  1VDD A;  1BMO A;  2LB7 A;  2ERW A;  2N71 A;  1CT0 I;  1WKX A;  3VDP A;  3OVO A;  3OXL A;  3OL0 A;  9WGA A;  2OU2 A;  2LEO A;  2UVO A;  1DS2 I;  3UFF A;  1TBN A;  1V1H A;  1Y1B A;  3UOE A;  3HH2 C;  1S20 A;  3TO9 A;  1HPT A;  2GKT I;  2JXD A;  3R5B A;  1HDL A;  5FUY A;  2QQC A;  3VDU A;  2SGD I;  3MEK A;  1OMT A;  1R79 A;  1UUC A;  1FYB A;  1V1I A;  3QTL D;  1WTJ A;  1DS3 I;  2CWG A;  2B0U C;  5EX3 A;  4E1R A;  1TOT A;  2ODD A;  2V1C C;  3FSY A;  5E3R A;  1NUB A;  1TBQ R;  5HI7 A;  3D00 A;  3FSX A;  1SGN I;  2ENZ A;  1CE3 A;  2L8E A;  1HJA I;  1Y8F A;  2E5R A;  2P6A C;  7WGA A;  2DIP A;  2ORV A;  5HQ8 A;  1NXU A;  2UZ3 A;  2J9R A;  2CJS C;  2ENN A;  1HEV A;  2KMP A;  5FUX A;  1P9G A;  2GKV A;  1SGQ I;  2J87 A;  2KMQ A;  3PDN A;  3UGD A;  3UEJ A;  1LR7 A;  4E1P A;  5J8C A;  4L9M A;  1N13 A;  2KCX A;  2LUY A;  3KY9 A;  3SEK C;  1OYV I;  1CGJ I;  2CWF A;  1CT4 I;  1CT2 I;  1IW4 A;  1AN1 I;  2SGE I;  3SGQ I;  5CCM A;  1FAR A;  4UXI A;  2GKR I;  1YTP A;  1RFH A;  5FUV A;  1MJB A;  1X74 A;  1K7U A;  4WP4 A;  2JZM A;  2BUS A;  2GVI A;  2NU0 I;  2N17 A;  2ORW A;  1TBR R;  2PQ8 A;  2W0T A;  2X3T A;  5J8F A;  1R0R I;  2A20 A;  2SGQ I;  1OMU A;  2QQE A;  2V1C A;  1M8B A;  1WGC A;  5EX0 A;  2WGC A;  2SGP I;  2DB6 A;  1WGT A;  1Y1C A;  3QWP A;  1OVO A;  1ULM A;  1MT1 A;  2XRC A;  1LR8 A;  3R5A A;  3R5D A;  2DKV A;  5FUW A;  3TJQ A;  1TBO A;  4B6D A;  1K7T A;  2OD1 A;  1M8C A;  1Z7K B;  1KBE A;  2B8T A;  4UXH A;  1LR9 A;  2VRW B;  2KMR A;  2RC4 A;  3BJI A;  2N1A B;  5E3Q A;  1TIH A;  3SGB I;  3VE5 A;  5JHW C;  2X52 A;  1KBF A;  3FC3 A;  1CHO I;  1TUS A;  1TUR A;  2N52 A;  2YQP A;  3UEY A;  1Z2I A;  1PPF I;  3QAH A;  4UXJ A;  2NU4 I; 
#chains in the Genus database with same CATH homology
 2SGF I;  1TGS I;  2WVJ A;  1SGY I;  2L7X A;  2JW6 A;  2E73 A;  4GI3 C;  3UGI A;  2ARP F;  2QQD A;  2NU3 I;  1PTQ A;  2ELI A;  4JCV E;  3RU0 A;  3UGL A;  1BUS A;  2ROW A;  2F3C I;  3B4V C;  1U5K A;  1XX6 A;  5DAE A;  1UVG A;  3OXF A;  3E59 A;  2WCY A;  3E2I A;  4HGU A;  4SGB I;  4A24 A;  2M5X A;  2JYY A;  2K9H A;  1KMA A;  2V53 A;  2OVO A;  2NU2 I;  1PCE A;  4OVO A;  3OXG A;  1PJU A;  1SGE I;  1PTR A;  2QPO A;  3GOX A;  1W3S A;  1W4R A;  1YU6 C;  1SGD I;  1CGI I;  1SGP I;  1SGR I;  2YUU A;  3CXL A;  1XBT A;  1FAQ A;  2JA1 A;  2FNF X;  1UVF A;  4FKD A;  1IY6 A;  2QQ0 A;  1H0Z A;  1X4S A;  2NU1 I;  5CCL A;  1CSO I;  1IY5 A;  1XA6 A;  2KMO A;  1VDD A;  1BMO A;  2ERW A;  2N71 A;  1CT0 I;  3VDP A;  3OVO A;  3OXL A;  3OL0 A;  2LEO A;  3UFF A;  1DS2 I;  1TBN A;  1V1H A;  1Y1B A;  3HH2 C;  1HPT A;  2GKT I;  2JXD A;  1HDL A;  5FUY A;  2QQC A;  3VDU A;  2SGD I;  3MEK A;  1OMT A;  1R79 A;  1UUC A;  1FYB A;  1V1I A;  3QTL D;  1DS3 I;  5EX3 A;  2B0U C;  4E1R A;  1TOT A;  2ODD A;  2V1C C;  1NUB A;  1TBQ R;  5HI7 A;  3D00 A;  1CE3 A;  1SGN I;  2ENZ A;  2L8E A;  1HJA I;  1Y8F A;  2E5R A;  2P6A C;  2DIP A;  2ORV A;  5HQ8 A;  2UZ3 A;  2J9R A;  2CJS C;  2ENN A;  2KMP A;  5FUX A;  3UGD A;  2GKV A;  1SGQ I;  2J87 A;  2KMQ A;  3PDN A;  4E1P A;  3UEJ A;  1LR7 A;  3SEK C;  1N13 A;  2KCX A;  2LUY A;  3KY9 A;  1OYV I;  1CGJ I;  1CT4 I;  1CT2 I;  1IW4 A;  1AN1 I;  2SGE I;  3SGQ I;  5CCM A;  1FAR A;  4UXI A;  2GKR I;  1YTP A;  1RFH A;  5FUV A;  1X74 A;  2JZM A;  2BUS A;  2GVI A;  2NU0 I;  2N17 A;  2ORW A;  1TBR R;  4L9M A;  2W0T A;  1R0R I;  2A20 A;  2SGQ I;  1OMU A;  2QQE A;  2V1C A;  1M8B A;  5EX0 A;  2SGP I;  2DB6 A;  1Y1C A;  3QWP A;  1OVO A;  1MT1 A;  2XRC A;  1LR8 A;  3TJQ A;  5FUW A;  1TBO A;  4B6D A;  2OD1 A;  1M8C A;  1Z7K B;  1KBE A;  2B8T A;  4UXH A;  1LR9 A;  2VRW B;  2KMR A;  3BJI A;  2N1A B;  3SGB I;  1TIH A;  3VE5 A;  5JHW C;  1KBF A;  3FC3 A;  1CHO I;  1TUS A;  1TUR A;  2N52 A;  2YQP A;  3UEY A;  1PPF I;  4UXJ A;  2NU4 I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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