1Q3IA

Crystal structure of na,k-atpase n-domain
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
214
structure length
192
Chain Sequence
MMTVAHMWFDNQIHEADTTTFDKRSPTWTALSRIAGLCNRAVFKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords Na,K-ATPase
publication title The Crystallographic Structure of Na,K-ATPase N-domain at 2.6 A Resolution
pubmed doi rcsb
source organism Sus scrofa
total genus 53
structure length 192
sequence length 214
ec nomenclature ec 7.2.2.13: Na(+)/K(+)-exchanging ATPase.
pdb deposition date 2003-07-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13246 Cation_ATPase Cation transport ATPase (P-type)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1110.10 Alpha Beta 3-Layer(aba) Sandwich Calcium-transporting ATPase, cytoplasmic domain N Calcium-transporting ATPase, cytoplasmic domain N 1q3iA00
3BA6A 5AW7A 4RESA 2EATA 1SVJA 5AW0A 3AR9A 2ZBFA 4XOUA 5AVZA 2YJ3A 4H1WA 1IWOA 3AR2A 5A3QA 5AVRA 4NABA 3NALA 3W5CA 2O9JA 5AW9A 2B8EA 3B8EA 3AR8A 1MO8A 4YCMA 4XE5A 3AR4A 3N8GA 5AVWA 3AR6A 4KYTA 4BBJA 5AW1A 3WGUA 1T5SA 3SKYA 2EAUA 2C88A 1SU4A 5AW2A 2BY4A 4Y3UA 3AR3A 3WGVA 2YJ6A 5AW5A 3B9BA 3A1EA 4BEWA 3A1DA 2ZBDA 2KMVA 3N5KA 2ARFA 3A3YA 5AVUA 2C8KA 5AVXA 3GWIA 4YCNA 2EARA 5AW8A 4BEVA 1VFPA 2IYEA 2A00A 1MO7A 1XP5A 2C8LA 3W5AA 3J7TA 5AW4A 2DQSA 3TLMA 2OA0A 2AGVA 5AVTA 4HYTA 2YJ4A 3NAMA 1WPGA 4UU1A 5AVQA 3FPBA 3FPSA 4RETA 3AR7A 3B9RA 3W5DA 4UU0A 5AW3A 4YCLA 3NANA 2ZXEA 5AVYA 3FGOA 2YFYA 2ZBEA 1U7QA 3A1CA 2YJ5A 5AW6A 5AVSA 3RFUA 5AVVA 1Q3IA 1T5TA 3KDPA 2KMXA 2ZBGA 4UMVA 2C9MA 3AR5A 3SKXA 5A3SA 4BYGA 3W5BA 2A29A 5A3RA 4J2TA
chains in the Genus database with same CATH superfamily
3BA6A 5AW7A 4RESA 2EATA 1SVJA 5AW0A 3AR9A 2ZBFA 4XOUA 5AVZA 2YJ3A 4H1WA 1IWOA 3AR2A 5A3QA 5AVRA 4NABA 3NALA 3W5CA 2O9JA 5AW9A 2B8EA 3B8EA 3AR8A 1MO8A 4YCMA 4XE5A 3AR4A 3N8GA 5AVWA 3AR6A 4KYTA 4BBJA 5AW1A 3WGUA 1T5SA 3SKYA 2EAUA 2C88A 1SU4A 5AW2A 2BY4A 4Y3UA 3AR3A 3WGVA 2YJ6A 5AW5A 3B9BA 3A1EA 4BEWA 3A1DA 2ZBDA 2KMVA 3N5KA 2ARFA 3A3YA 5AVUA 2C8KA 5AVXA 3GWIA 4YCNA 2EARA 5AW8A 4BEVA 1VFPA 2IYEA 2A00A 1MO7A 1XP5A 2C8LA 3W5AA 3J7TA 5AW4A 2DQSA 3TLMA 2OA0A 2AGVA 5AVTA 4HYTA 2YJ4A 3NAMA 1WPGA 4UU1A 5AVQA 3FPBA 3FPSA 4RETA 3AR7A 3B9RA 3W5DA 4UU0A 5AW3A 4YCLA 3NANA 2ZXEA 5AVYA 3FGOA 2YFYA 2ZBEA 1U7QA 3A1CA 2YJ5A 5AW6A 5AVSA 3RFUA 5AVVA 1Q3IA 1T5TA 3KDPA 2KMXA 2ZBGA 4UMVA 2C9MA 3AR5A 3SKXA 5A3SA 4BYGA 3W5BA 2A29A 5A3RA 4J2TA
chains in the Genus database with same CATH topology
3BA6A 5AW7A 4RESA 2EATA 1SVJA 5AW0A 3AR9A 2ZBFA 4XOUA 5AVZA 2YJ3A 4H1WA 1IWOA 3AR2A 5A3QA 5AVRA 4NABA 3NALA 3W5CA 2O9JA 5AW9A 2B8EA 3B8EA 3AR8A 1MO8A 4YCMA 4XE5A 3AR4A 3N8GA 5AVWA 3AR6A 4KYTA 4BBJA 5AW1A 3WGUA 1T5SA 3SKYA 2EAUA 2C88A 1SU4A 5AW2A 2BY4A 4Y3UA 3AR3A 3WGVA 2YJ6A 5AW5A 3B9BA 3A1EA 4BEWA 3A1DA 2ZBDA 2KMVA 3N5KA 2ARFA 3A3YA 5AVUA 2C8KA 5AVXA 3GWIA 4YCNA 2EARA 5AW8A 4BEVA 1VFPA 2IYEA 2A00A 1MO7A 1XP5A 2C8LA 3W5AA 3J7TA 5AW4A 2DQSA 3TLMA 2OA0A 2AGVA 5AVTA 4HYTA 2YJ4A 3NAMA 1WPGA 4UU1A 5AVQA 3FPBA 3FPSA 4RETA 3AR7A 3B9RA 3W5DA 4UU0A 5AW3A 4YCLA 3NANA 2ZXEA 5AVYA 3FGOA 2YFYA 2ZBEA 1U7QA 3A1CA 2YJ5A 5AW6A 5AVSA 3RFUA 5AVVA 1Q3IA 1T5TA 3KDPA 2KMXA 2ZBGA 4UMVA 2C9MA 3AR5A 3SKXA 5A3SA 4BYGA 3W5BA 2A29A 5A3RA 4J2TA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3BA6 A;  5AW7 A;  4RES A;  2EAT A;  1SVJ A;  5AW0 A;  3AR9 A;  2ZBF A;  4XOU A;  5AVZ A;  2YJ3 A;  4H1W A;  1IWO A;  3AR2 A;  5A3Q A;  5AVR A;  4NAB A;  3NAL A;  3W5C A;  2O9J A;  5AW9 A;  2B8E A;  3B8E A;  3AR8 A;  1MO8 A;  4YCM A;  4XE5 A;  3AR4 A;  3N8G A;  5AVW A;  3AR6 A;  4KYT A;  4BBJ A;  5AW1 A;  3WGU A;  1T5S A;  3SKY A;  2EAU A;  2C88 A;  1SU4 A;  5AW2 A;  2BY4 A;  4Y3U A;  3AR3 A;  3WGV A;  2YJ6 A;  5AW5 A;  3B9B A;  3A1E A;  4BEW A;  3A1D A;  2ZBD A;  2KMV A;  3N5K A;  2ARF A;  3A3Y A;  5AVU A;  2C8K A;  5AVX A;  3GWI A;  4YCN A;  2EAR A;  5AW8 A;  4BEV A;  1VFP A;  2IYE A;  2A00 A;  1MO7 A;  1XP5 A;  2C8L A;  3W5A A;  3J7T A;  5AW4 A;  2DQS A;  3TLM A;  2OA0 A;  2AGV A;  5AVT A;  4HYT A;  2YJ4 A;  3NAM A;  1WPG A;  4UU1 A;  5AVQ A;  3FPB A;  3FPS A;  4RET A;  3AR7 A;  3B9R A;  3W5D A;  4UU0 A;  5AW3 A;  4YCL A;  3NAN A;  2ZXE A;  5AVY A;  3FGO A;  2YFY A;  2ZBE A;  1U7Q A;  3A1C A;  2YJ5 A;  5AW6 A;  5AVS A;  3RFU A;  5AVV A;  1Q3I A;  1T5T A;  3KDP A;  2KMX A;  2ZBG A;  4UMV A;  2C9M A;  3AR5 A;  3SKX A;  5A3S A;  4BYG A;  3W5B A;  2A29 A;  5A3R A;  4J2T A; 
#chains in the Genus database with same CATH topology
 3BA6 A;  5AW7 A;  4RES A;  2EAT A;  1SVJ A;  5AW0 A;  3AR9 A;  2ZBF A;  4XOU A;  5AVZ A;  2YJ3 A;  4H1W A;  1IWO A;  3AR2 A;  5A3Q A;  5AVR A;  4NAB A;  3NAL A;  3W5C A;  2O9J A;  5AW9 A;  2B8E A;  3B8E A;  3AR8 A;  1MO8 A;  4YCM A;  4XE5 A;  3AR4 A;  3N8G A;  5AVW A;  3AR6 A;  4KYT A;  4BBJ A;  5AW1 A;  3WGU A;  1T5S A;  3SKY A;  2EAU A;  2C88 A;  1SU4 A;  5AW2 A;  2BY4 A;  4Y3U A;  3AR3 A;  3WGV A;  2YJ6 A;  5AW5 A;  3B9B A;  3A1E A;  4BEW A;  3A1D A;  2ZBD A;  2KMV A;  3N5K A;  2ARF A;  3A3Y A;  5AVU A;  2C8K A;  5AVX A;  3GWI A;  4YCN A;  2EAR A;  5AW8 A;  4BEV A;  1VFP A;  2IYE A;  2A00 A;  1MO7 A;  1XP5 A;  2C8L A;  3W5A A;  3J7T A;  5AW4 A;  2DQS A;  3TLM A;  2OA0 A;  2AGV A;  5AVT A;  4HYT A;  2YJ4 A;  3NAM A;  1WPG A;  4UU1 A;  5AVQ A;  3FPB A;  3FPS A;  4RET A;  3AR7 A;  3B9R A;  3W5D A;  4UU0 A;  5AW3 A;  4YCL A;  3NAN A;  2ZXE A;  5AVY A;  3FGO A;  2YFY A;  2ZBE A;  1U7Q A;  3A1C A;  2YJ5 A;  5AW6 A;  5AVS A;  3RFU A;  5AVV A;  1Q3I A;  1T5T A;  3KDP A;  2KMX A;  2ZBG A;  4UMV A;  2C9M A;  3AR5 A;  3SKX A;  5A3S A;  4BYG A;  3W5B A;  2A29 A;  5A3R A;  4J2T A; 
#chains in the Genus database with same CATH homology
 3BA6 A;  5AW7 A;  4RES A;  2EAT A;  1SVJ A;  5AW0 A;  3AR9 A;  2ZBF A;  4XOU A;  5AVZ A;  2YJ3 A;  4H1W A;  1IWO A;  3AR2 A;  5A3Q A;  5AVR A;  4NAB A;  3NAL A;  3W5C A;  2O9J A;  5AW9 A;  2B8E A;  3B8E A;  3AR8 A;  1MO8 A;  4YCM A;  4XE5 A;  3AR4 A;  3N8G A;  5AVW A;  3AR6 A;  4KYT A;  4BBJ A;  5AW1 A;  3WGU A;  1T5S A;  3SKY A;  2EAU A;  2C88 A;  1SU4 A;  5AW2 A;  2BY4 A;  4Y3U A;  3AR3 A;  3WGV A;  2YJ6 A;  5AW5 A;  3B9B A;  3A1E A;  4BEW A;  3A1D A;  2ZBD A;  2KMV A;  3N5K A;  2ARF A;  3A3Y A;  5AVU A;  2C8K A;  5AVX A;  3GWI A;  4YCN A;  2EAR A;  5AW8 A;  4BEV A;  1VFP A;  2IYE A;  2A00 A;  1MO7 A;  1XP5 A;  2C8L A;  3W5A A;  3J7T A;  5AW4 A;  2DQS A;  3TLM A;  2OA0 A;  2AGV A;  5AVT A;  4HYT A;  2YJ4 A;  3NAM A;  1WPG A;  4UU1 A;  5AVQ A;  3FPB A;  3FPS A;  4RET A;  3AR7 A;  3B9R A;  3W5D A;  4UU0 A;  5AW3 A;  4YCL A;  3NAN A;  2ZXE A;  5AVY A;  3FGO A;  2YFY A;  2ZBE A;  1U7Q A;  3A1C A;  2YJ5 A;  5AW6 A;  5AVS A;  3RFU A;  5AVV A;  1Q3I A;  1T5T A;  3KDP A;  2KMX A;  2ZBG A;  4UMV A;  2C9M A;  3AR5 A;  3SKX A;  5A3S A;  4BYG A;  3W5B A;  2A29 A;  5A3R A;  4J2T A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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