1SGPI

Ala 18 variant of turkey ovomucoid inhibitor third domain complexed with streptomyces griseus proteinase b
Total Genus 12
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTAEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Complex (serine protease/inhibitor)
molecule keywords STREPTOMYCES GRISEUS PROTEINASE B
publication title Water molecules participate in proteinase-inhibitor interactions: crystal structures of Leu18, Ala18, and Gly18 variants of turkey ovomucoid inhibitor third domain complexed with Streptomyces griseus proteinase B.
pubmed rcsb
source organism Streptomyces griseus
total genus 12
structure length 51
sequence length 51
ec nomenclature
pdb deposition date 1995-05-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1sgpI00
1NUBA 3QTLD 1Z7KB 4GI3C 1SGRI 2SGQI 2OVOA 1DS2I 2GKRI 3OVOA 2JYYA 1CT4I 4SGBI 2QQCA 1SGYI 1HJAI 1LR9A 1TBQR 1SGPI 1CT0I 2KMPA 1AN1I 1UVGA 1PCEA 2P6AC 1PJUA 3HH2C 2N71A 1IY5A 1OMTA 1FYBA 2GKVA 1LR7A 5DAEA 1OYVI 1N13A 2SGDI 3SEKC 2LEOA 1MT1A 1IW4A 1M8BA 1H0ZA 2M5XA 4HGUA 1CSOI 1TUSA 1Y1BA 5JHWC 1YTPA 2KMRA 2NU4I 2ARPF 1TIHA 2WCYA 1CE3A 4OVOA 2N17A 2SGFI 1BUSA 1UUCA 2BUSA 1HPTA 3SGBI 2NU0I 1CGII 2NU1I 1PPFI 1CT2I 2GKTI 1M8CA 2NU2I 3B4VC 2N52A 1OMUA 2JZMA 2QQDA 2NU3I 1TURA 1CHOI 1LR8A 1OVOA 1TGSI 2KMOA 2F3CI 3SGQI 2SGPI 2KMQA 1KMAA 1Y1CA 2B0UC 1BMOA 1UVFA 3TJQA 1SGDI 1SGNI 1CGJI 1YU6C 2ERWA 2SGEI 2JXDA 2KCXA 1HDLA 1SGQI 1IY6A 2XRCA 1DS3I 1TBRR 1R0RI 2V53A 1SGEI
chains in the Genus database with same CATH superfamily
1NUBA 2CWFA 2Y0MA 5EX3A 1X74A 3TOBA 3QTLD 5CCLA 1Z7KB 2RC4A 4GI3C 3QWPA 5EX0A 3GOXA 2WVJA 3E59A 1SGRI 2SGQI 3UGLA 1HEVA 9WGAA 2OVOA 3TO7A 2GIVA 1DS2I 1ULMA 1WTJA 2J9RA 2GKRI 1XX6A 3OVOA 3R5CA 2VRWB 2JW6A 2JYYA 1CT4I 4JCVE 4SGBI 3R5DA 4UXJA 3CXLA 4UXIA 2QQCA 1SGYI 1KBEA 1HJAI 1LR9A 1TBQR 1SGPI 1U5KA 1Q9BA 1Z2IA 1CT0I 2DB6A 1K7UA 3R5BA 3UGDA 2KMPA 3UEYA 1AN1I 1UVGA 7WGAA 2QQEA 5HI7A 1PCEA 1W4RA 2DKVA 4DNCA 2P6AC 2UZ3A 3TOAA 5HQ8A 1PJUA 1ULKA 1Y8FA 2YQPA 3HH2C 2K9HA 2N71A 1IY5A 2PQ8A 1OMTA 2OZUA 3OXFA 1FYBA 3MEKA 4WP4A 2GKVA 2ROWA 3UFFA 3UGIA 5CCMA 1LR7A 2E73A 5DAEA 3VE5A 1OYVI 1FAQA 2CWHA 1N13A 2SGDI 2QPOA 5J8CA 2L8EA 3SEKC 2LEOA 1MT1A 3FSXA 1M8BA 2X52A 3QAHA 2UVOA 1WGCA 1MJAA 1IW4A 1H0ZA 1FY7A 2ENNA 2M5XA 4HGUA 1CSOI 1TUSA 1K7TA 1Y1BA 5FUYA 1WGTA 1XBTA 5JHWC 5E3RA 1YTPA 2OD1A 2KMRA 4MPIA 1UHAA 2ENZA 2ARPF 1TIHA 2NU4I 2WCYA 3OXLA 3UEJA 1CE3A 2JA1A 1WKXA 2A20A 2ORVA 4OVOA 2N17A 2N1AB 2CWGA 2WGCA 2SGFI 1TOTA 1BUSA 1UUCA 3OL0A 2BUSA 2LB7A 1HPTA 5E3PA 3SGBI 1P9GA 5FUXA 2NU0I 1ULNA 1CGII 2NU1I 1PPFI 4E1RA 1CT2I 2GKTI 3D00A 4UXHA 5E3QA 3VDUA 4AMLA 4E1PA 1M8CA 2B8TA 2NU2I 2N52A 3B4VC 3FSYA 3KY9A 5J8FA 1OMUA 1PTQA 2JZMA 2E5RA 2QQDA 3VDPA 2NU3I 1TURA 1CHOI 1LR8A 3OXGA 4B6DA 1OVOA 2LUYA 1S20A 1TGSI 2ORWA 2X3TA 2KMOA 1P9ZA 1KBFA 1MJ9A 2OU2A 2F3CI 5FUWA 4A24A 3RU0A 1X4SA 2DIPA 4L9MA 1VDDA 3SGQI 1W3SA 2SGPI 1V1IA 1TBNA 2KMQA 2YUUA 3BJIA 4FKDA 1KMAA 1MJBA 1TBOA 5FUVA 1FARA 1Y1CA 1BMOA 1UVFA 2B0UC 3PDNA 3R5AA 3TJQA 2V1CC 3E2IA 1RFHA 1SGDI 1SGNI 2FNFX 1CGJI 3TO9A 1YU6C 2ERWA 3TO6A 2L7XA 2SGEI 2JXDA 2KCXA 2V1CA 1R79A 1HDLA 1SGQI 2ODDA 1IY6A 2XRCA 2W0TA 1DS3I 1V1HA 1TBRR 1PTRA 1K7VA 2CJSC 2J87A 2ELIA 2RIJA 1R0RI 2QQ0A 3UOEA 2V53A 3FC3A 1XA6A 2GVIA 1NXUA 1SGEI
chains in the Genus database with same CATH topology
1NUBA 5EX3A 1X74A 5CCLA 3QTLD 1Z7KB 4GI3C 3QWPA 5EX0A 3GOXA 2WVJA 3E59A 1SGRI 2SGQI 3UGLA 2OVOA 1DS2I 2J9RA 2GKRI 1XX6A 3OVOA 2VRWB 2JW6A 2JYYA 1CT4I 4JCVE 4SGBI 4UXJA 3CXLA 4UXIA 2QQCA 1KBEA 1HJAI 1LR9A 1SGYI 1TBQR 1SGPI 1U5KA 2DB6A 1CT0I 3UGDA 2KMPA 3UEYA 1AN1I 1UVGA 2QQEA 5HI7A 1PCEA 1W4RA 2P6AC 2UZ3A 5HQ8A 1PJUA 1Y8FA 2YQPA 3HH2C 2K9HA 2N71A 1IY5A 1OMTA 3OXFA 1FYBA 3MEKA 2GKVA 2ROWA 3UFFA 3UGIA 5CCMA 1LR7A 2E73A 5DAEA 3VE5A 1OYVI 1FAQA 1N13A 2SGDI 2QPOA 2L8EA 3SEKC 2LEOA 1MT1A 1IW4A 1M8BA 1H0ZA 2ENNA 2M5XA 4HGUA 1CSOI 1TUSA 1Y1BA 5FUYA 1XBTA 5JHWC 1YTPA 2OD1A 2KMRA 2ENZA 2ARPF 1TIHA 2NU4I 2WCYA 3OXLA 3UEJA 1CE3A 2JA1A 2A20A 2ORVA 1KBFA 4OVOA 2N17A 2N1AB 2SGFI 1TOTA 1BUSA 1UUCA 3OL0A 2BUSA 1HPTA 3SGBI 5FUXA 2NU0I 1CGII 2NU1I 1PPFI 4E1RA 1CT2I 2GKTI 3D00A 4UXHA 3VDUA 4E1PA 1M8CA 2B8TA 2NU2I 2N52A 3B4VC 3KY9A 1OMUA 1PTQA 2JZMA 2E5RA 2QQDA 3VDPA 2NU3I 1TURA 1CHOI 1LR8A 3OXGA 4B6DA 1OVOA 2LUYA 1TGSI 2ORWA 2KMOA 2F3CI 5FUWA 4A24A 3RU0A 1X4SA 2DIPA 4L9MA 1VDDA 3SGQI 1W3SA 2SGPI 1V1IA 1TBNA 2KMQA 2YUUA 3BJIA 4FKDA 1KMAA 1TBOA 5FUVA 1FARA 1Y1CA 1BMOA 1UVFA 2B0UC 3PDNA 3TJQA 2V1CC 3E2IA 1RFHA 1SGDI 1SGNI 2FNFX 1CGJI 1YU6C 2ERWA 2L7XA 2SGEI 2JXDA 2KCXA 2V1CA 1R79A 1HDLA 1SGQI 2ODDA 1IY6A 2XRCA 2W0TA 1DS3I 1V1HA 1PTRA 1TBRR 2CJSC 2J87A 2ELIA 1R0RI 2QQ0A 2V53A 3FC3A 1XA6A 2GVIA 1SGEI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1NUB A;  3QTL D;  1Z7K B;  4GI3 C;  1SGR I;  2SGQ I;  2OVO A;  1DS2 I;  2GKR I;  3OVO A;  2JYY A;  1CT4 I;  4SGB I;  2QQC A;  1SGY I;  1HJA I;  1LR9 A;  1TBQ R;  1SGP I;  1CT0 I;  2KMP A;  1AN1 I;  1UVG A;  1PCE A;  2P6A C;  1PJU A;  3HH2 C;  2N71 A;  1IY5 A;  1OMT A;  1FYB A;  2GKV A;  1LR7 A;  5DAE A;  1OYV I;  1N13 A;  2SGD I;  3SEK C;  2LEO A;  1MT1 A;  1IW4 A;  1M8B A;  1H0Z A;  2M5X A;  4HGU A;  1CSO I;  1TUS A;  1Y1B A;  5JHW C;  1YTP A;  2KMR A;  2NU4 I;  2ARP F;  1TIH A;  2WCY A;  1CE3 A;  4OVO A;  2N17 A;  2SGF I;  1BUS A;  1UUC A;  2BUS A;  1HPT A;  3SGB I;  2NU0 I;  1CGI I;  2NU1 I;  1PPF I;  1CT2 I;  2GKT I;  1M8C A;  2NU2 I;  3B4V C;  2N52 A;  1OMU A;  2JZM A;  2QQD A;  2NU3 I;  1TUR A;  1CHO I;  1LR8 A;  1OVO A;  1TGS I;  2KMO A;  2F3C I;  3SGQ I;  2SGP I;  2KMQ A;  1KMA A;  1Y1C A;  2B0U C;  1BMO A;  1UVF A;  3TJQ A;  1SGD I;  1SGN I;  1CGJ I;  1YU6 C;  2ERW A;  2SGE I;  2JXD A;  2KCX A;  1HDL A;  1SGQ I;  1IY6 A;  2XRC A;  1DS3 I;  1TBR R;  1R0R I;  2V53 A;  1SGE I; 
#chains in the Genus database with same CATH topology
 1NUB A;  2CWF A;  2Y0M A;  5EX3 A;  1X74 A;  3TOB A;  3QTL D;  5CCL A;  1Z7K B;  2RC4 A;  4GI3 C;  3QWP A;  5EX0 A;  3GOX A;  2WVJ A;  3E59 A;  1SGR I;  2SGQ I;  3UGL A;  1HEV A;  9WGA A;  2OVO A;  3TO7 A;  2GIV A;  1DS2 I;  1ULM A;  1WTJ A;  2J9R A;  2GKR I;  1XX6 A;  3OVO A;  3R5C A;  2VRW B;  2JW6 A;  2JYY A;  1CT4 I;  4JCV E;  4SGB I;  3R5D A;  4UXJ A;  3CXL A;  4UXI A;  2QQC A;  1SGY I;  1KBE A;  1HJA I;  1LR9 A;  1TBQ R;  1SGP I;  1U5K A;  1Q9B A;  1Z2I A;  1CT0 I;  2DB6 A;  1K7U A;  3R5B A;  3UGD A;  2KMP A;  3UEY A;  1AN1 I;  1UVG A;  7WGA A;  2QQE A;  5HI7 A;  1PCE A;  1W4R A;  2DKV A;  4DNC A;  2P6A C;  2UZ3 A;  3TOA A;  5HQ8 A;  1PJU A;  1ULK A;  1Y8F A;  2YQP A;  3HH2 C;  2K9H A;  2N71 A;  1IY5 A;  2PQ8 A;  1OMT A;  2OZU A;  3OXF A;  1FYB A;  3MEK A;  4WP4 A;  2GKV A;  2ROW A;  3UFF A;  3UGI A;  5CCM A;  1LR7 A;  2E73 A;  5DAE A;  3VE5 A;  1OYV I;  1FAQ A;  2CWH A;  1N13 A;  2SGD I;  2QPO A;  5J8C A;  2L8E A;  3SEK C;  2LEO A;  1MT1 A;  3FSX A;  1M8B A;  2X52 A;  3QAH A;  2UVO A;  1WGC A;  1MJA A;  1IW4 A;  1H0Z A;  1FY7 A;  2ENN A;  2M5X A;  4HGU A;  1CSO I;  1TUS A;  1K7T A;  1Y1B A;  5FUY A;  1WGT A;  1XBT A;  5JHW C;  5E3R A;  1YTP A;  2OD1 A;  2KMR A;  4MPI A;  1UHA A;  2ENZ A;  2ARP F;  1TIH A;  2NU4 I;  2WCY A;  3OXL A;  3UEJ A;  1CE3 A;  2JA1 A;  1WKX A;  2A20 A;  2ORV A;  4OVO A;  2N17 A;  2N1A B;  2CWG A;  2WGC A;  2SGF I;  1TOT A;  1BUS A;  1UUC A;  3OL0 A;  2BUS A;  2LB7 A;  1HPT A;  5E3P A;  3SGB I;  1P9G A;  5FUX A;  2NU0 I;  1ULN A;  1CGI I;  2NU1 I;  1PPF I;  4E1R A;  1CT2 I;  2GKT I;  3D00 A;  4UXH A;  5E3Q A;  3VDU A;  4AML A;  4E1P A;  1M8C A;  2B8T A;  2NU2 I;  2N52 A;  3B4V C;  3FSY A;  3KY9 A;  5J8F A;  1OMU A;  1PTQ A;  2JZM A;  2E5R A;  2QQD A;  3VDP A;  2NU3 I;  1TUR A;  1CHO I;  1LR8 A;  3OXG A;  4B6D A;  1OVO A;  2LUY A;  1S20 A;  1TGS I;  2ORW A;  2X3T A;  2KMO A;  1P9Z A;  1KBF A;  1MJ9 A;  2OU2 A;  2F3C I;  5FUW A;  4A24 A;  3RU0 A;  1X4S A;  2DIP A;  4L9M A;  1VDD A;  3SGQ I;  1W3S A;  2SGP I;  1V1I A;  1TBN A;  2KMQ A;  2YUU A;  3BJI A;  4FKD A;  1KMA A;  1MJB A;  1TBO A;  5FUV A;  1FAR A;  1Y1C A;  1BMO A;  1UVF A;  2B0U C;  3PDN A;  3R5A A;  3TJQ A;  2V1C C;  3E2I A;  1RFH A;  1SGD I;  1SGN I;  2FNF X;  1CGJ I;  3TO9 A;  1YU6 C;  2ERW A;  3TO6 A;  2L7X A;  2SGE I;  2JXD A;  2KCX A;  2V1C A;  1R79 A;  1HDL A;  1SGQ I;  2ODD A;  1IY6 A;  2XRC A;  2W0T A;  1DS3 I;  1V1H A;  1TBR R;  1PTR A;  1K7V A;  2CJS C;  2J87 A;  2ELI A;  2RIJ A;  1R0R I;  2QQ0 A;  3UOE A;  2V53 A;  3FC3 A;  1XA6 A;  2GVI A;  1NXU A;  1SGE I; 
#chains in the Genus database with same CATH homology
 1NUB A;  5EX3 A;  1X74 A;  5CCL A;  3QTL D;  1Z7K B;  4GI3 C;  3QWP A;  5EX0 A;  3GOX A;  2WVJ A;  3E59 A;  1SGR I;  2SGQ I;  3UGL A;  2OVO A;  1DS2 I;  2J9R A;  2GKR I;  1XX6 A;  3OVO A;  2VRW B;  2JW6 A;  2JYY A;  1CT4 I;  4JCV E;  4SGB I;  4UXJ A;  3CXL A;  4UXI A;  2QQC A;  1KBE A;  1HJA I;  1LR9 A;  1SGY I;  1TBQ R;  1SGP I;  1U5K A;  2DB6 A;  1CT0 I;  3UGD A;  2KMP A;  3UEY A;  1AN1 I;  1UVG A;  2QQE A;  5HI7 A;  1PCE A;  1W4R A;  2P6A C;  2UZ3 A;  5HQ8 A;  1PJU A;  1Y8F A;  2YQP A;  3HH2 C;  2K9H A;  2N71 A;  1IY5 A;  1OMT A;  3OXF A;  1FYB A;  3MEK A;  2GKV A;  2ROW A;  3UFF A;  3UGI A;  5CCM A;  1LR7 A;  2E73 A;  5DAE A;  3VE5 A;  1OYV I;  1FAQ A;  1N13 A;  2SGD I;  2QPO A;  2L8E A;  3SEK C;  2LEO A;  1MT1 A;  1IW4 A;  1M8B A;  1H0Z A;  2ENN A;  2M5X A;  4HGU A;  1CSO I;  1TUS A;  1Y1B A;  5FUY A;  1XBT A;  5JHW C;  1YTP A;  2OD1 A;  2KMR A;  2ENZ A;  2ARP F;  1TIH A;  2NU4 I;  2WCY A;  3OXL A;  3UEJ A;  1CE3 A;  2JA1 A;  2A20 A;  2ORV A;  1KBF A;  4OVO A;  2N17 A;  2N1A B;  2SGF I;  1TOT A;  1BUS A;  1UUC A;  3OL0 A;  2BUS A;  1HPT A;  3SGB I;  5FUX A;  2NU0 I;  1CGI I;  2NU1 I;  1PPF I;  4E1R A;  1CT2 I;  2GKT I;  3D00 A;  4UXH A;  3VDU A;  4E1P A;  1M8C A;  2B8T A;  2NU2 I;  2N52 A;  3B4V C;  3KY9 A;  1OMU A;  1PTQ A;  2JZM A;  2E5R A;  2QQD A;  3VDP A;  2NU3 I;  1TUR A;  1CHO I;  1LR8 A;  3OXG A;  4B6D A;  1OVO A;  2LUY A;  1TGS I;  2ORW A;  2KMO A;  2F3C I;  5FUW A;  4A24 A;  3RU0 A;  1X4S A;  2DIP A;  4L9M A;  1VDD A;  3SGQ I;  1W3S A;  2SGP I;  1V1I A;  1TBN A;  2KMQ A;  2YUU A;  3BJI A;  4FKD A;  1KMA A;  1TBO A;  5FUV A;  1FAR A;  1Y1C A;  1BMO A;  1UVF A;  2B0U C;  3PDN A;  3TJQ A;  2V1C C;  3E2I A;  1RFH A;  1SGD I;  1SGN I;  2FNF X;  1CGJ I;  1YU6 C;  2ERW A;  2L7X A;  2SGE I;  2JXD A;  2KCX A;  2V1C A;  1R79 A;  1HDL A;  1SGQ I;  2ODD A;  1IY6 A;  2XRC A;  2W0T A;  1DS3 I;  1V1H A;  1PTR A;  1TBR R;  2CJS C;  2J87 A;  2ELI A;  1R0R I;  2QQ0 A;  2V53 A;  3FC3 A;  1XA6 A;  2GVI A;  1SGE I; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...