1T44G

Structural basis of actin sequestration by thymosin-b4: implications for arp2/3 activation
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
144
structure length
144
Chain Sequence
EHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVETQEKNPLPSKETIEQEKQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural protein
molecule keywords Chimera of Gelsolin domain 1 and C-Terminal domain of thymos
publication title Structural basis of actin sequestration by thymosin-beta4: implications for WH2 proteins.
pubmed doi rcsb
source organism Homo sapiens
total genus 41
structure length 144
sequence length 144
ec nomenclature
pdb deposition date 2004-04-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
G PF00626 Gelsolin Gelsolin repeat
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 1t44G00
2MP4A 1NM1G 1M2VB 3EGXB 2QTVA 1C0GS 2D8BA 4Z94G 1RGIG 3EG9B 5KYUA 1PD0A 4CBWG 3A5NS 3EGDA 5KYWB 2XF1A 4KEEA 1H1VG 1D4XG 1WNJA 1AHQA 1YVNG 2NUTB 3FG6A 1CFYA 5HVKB 2NUPA 1SVYA 3CIPG 4CBUG 2FF3A 2HD7A 4KEFA 3FFKA 1P8ZG 1PCXA 1WFSA 5KYXA 1NPHA 2VILA 3EFOB 5KYYA 3CJBG 5L6WC 3FG7A 5A1MA 5FAFA 2FH4A 1MDUA 3A5LS 2VACA 1P8XA 1VFQA 2FGHA 4BEX1 1AK6A 2XFAA 5KYNA 1UDMA 2FH2A 1CNUA 5DD2A 2I2QA 1WM4A 1VKKA 3A5OS 3CI5G 3EH1A 1NLVG 3EGXA 1X67A 2VIKA 3L50A 5FAEA 1TMWA 2FF6G 4S10C 2LLFA 2LXXA 1D0NA 3EG9A 1HQZ1 1M2OA 1T2LA 3EH2A 2LJ8A 5KYWA 1T44G 2L72A 2FH3A 1NMDG 2KVKA 1KCQA 3Q2BA 4PKHB 2NUTA 1ESVS 4JD2H 3FFNA 2MOTA 1PD1A 5KYUB 1COFA 3EGDB 1F7SA 1C0FS 3CJCG 4CBXG 1T3XA 1T3YA 1M2VA 2FH1A 2NUPB 1Q8XA 4PKGG 1V6FA 3EFOA 1TVJA 5IVUA 3A5MS 1YAGG 5HVKD 3TU5B 1SVQA 4PKIG 2MV2A 1AK7A 5KYXB 1DEJS 5KYYB 1JHWA 1QPVA 4KEDA 1M4JA 1Q8GA 1SVRA 1EQYS 2W0IA 3DAWB 1J72A 4LIZA
chains in the Genus database with same CATH superfamily
2MP4A 1NM1G 1M2VB 3EGXB 2QTVA 1C0GS 2D8BA 4Z94G 1RGIG 3EG9B 5KYUA 1PD0A 4CBWG 3A5NS 3EGDA 5KYWB 2XF1A 4KEEA 1H1VG 1D4XG 1WNJA 1AHQA 1YVNG 2NUTB 3FG6A 1CFYA 5HVKB 2NUPA 1SVYA 3CIPG 4CBUG 2FF3A 2HD7A 4KEFA 3FFKA 1P8ZG 1PCXA 1WFSA 5KYXA 1NPHA 2VILA 3EFOB 5KYYA 3CJBG 5L6WC 3FG7A 5A1MA 5FAFA 2FH4A 1MDUA 3A5LS 2VACA 1P8XA 1VFQA 2FGHA 4BEX1 1AK6A 2XFAA 5KYNA 1UDMA 2FH2A 1CNUA 5DD2A 2I2QA 1WM4A 1VKKA 3DA7A 3A5OS 3CI5G 3EH1A 1NLVG 3EGXA 1X67A 2VIKA 3L50A 5FAEA 1TMWA 2FF6G 4S10C 2LLFA 2LXXA 1D0NA 3EG9A 1HQZ1 1M2OA 1T2LA 3EH2A 2LJ8A 5KYWA 1T44G 2L72A 2FH3A 1NMDG 2KVKA 1KCQA 3Q2BA 4PKHB 2NUTA 1ESVS 4JD2H 3FFNA 2MOTA 1PD1A 5KYUB 1COFA 3EGDB 1F7SA 1C0FS 3CJCG 4CBXG 1T3XA 1T3YA 1M2VA 2FH1A 2NUPB 1Q8XA 4PKGG 1V6FA 3EFOA 1TVJA 5IVUA 3A5MS 1YAGG 5HVKD 3TU5B 1SVQA 4PKIG 2MV2A 1AK7A 5KYXB 1DEJS 5KYYB 1JHWA 1QPVA 4KEDA 1M4JA 1Q8GA 1SVRA 1EQYS 2W0IA 3DAWB 1J72A 4LIZA
chains in the Genus database with same CATH topology
2MP4A 1NM1G 1M2VB 3EGXB 2QTVA 1C0GS 2D8BA 4Z94G 1RGIG 3EG9B 5KYUA 1PD0A 4CBWG 3A5NS 3EGDA 5KYWB 2XF1A 4KEEA 1H1VG 1D4XG 1WNJA 1AHQA 1YVNG 2NUTB 3FG6A 1CFYA 5HVKB 2NUPA 1SVYA 3CIPG 4CBUG 2FF3A 2HD7A 4KEFA 3FFKA 1P8ZG 1PCXA 1WFSA 5KYXA 1NPHA 2VILA 3EFOB 5KYYA 3CJBG 5L6WC 3FG7A 5A1MA 5FAFA 2FH4A 1MDUA 3A5LS 2VACA 1P8XA 1VFQA 2FGHA 4BEX1 1AK6A 2XFAA 5KYNA 1UDMA 2FH2A 1CNUA 5DD2A 2I2QA 1WM4A 1VKKA 3DA7A 3A5OS 3CI5G 3EH1A 1NLVG 3EGXA 1X67A 2VIKA 3L50A 5FAEA 1TMWA 2FF6G 4S10C 2LLFA 2LXXA 1D0NA 3EG9A 1HQZ1 1M2OA 1T2LA 3EH2A 2LJ8A 5KYWA 1T44G 2L72A 2FH3A 1NMDG 2KVKA 1KCQA 3Q2BA 4PKHB 2NUTA 1ESVS 4JD2H 3FFNA 2MOTA 1PD1A 5KYUB 1COFA 3EGDB 1F7SA 1C0FS 3CJCG 4CBXG 1T3XA 1T3YA 1M2VA 2FH1A 2NUPB 1Q8XA 4PKGG 1V6FA 3EFOA 1TVJA 5IVUA 3A5MS 1YAGG 5HVKD 3TU5B 1SVQA 4PKIG 2MV2A 1AK7A 5KYXB 1DEJS 5KYYB 1JHWA 1QPVA 4KEDA 1M4JA 1Q8GA 1SVRA 1EQYS 2W0IA 3DAWB 1J72A 4LIZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MP4 A;  1NM1 G;  1M2V B;  3EGX B;  2QTV A;  1C0G S;  2D8B A;  4Z94 G;  1RGI G;  3EG9 B;  5KYU A;  1PD0 A;  4CBW G;  3A5N S;  3EGD A;  5KYW B;  2XF1 A;  4KEE A;  1H1V G;  1D4X G;  1WNJ A;  1AHQ A;  1YVN G;  2NUT B;  3FG6 A;  1CFY A;  5HVK B;  2NUP A;  1SVY A;  3CIP G;  4CBU G;  2FF3 A;  2HD7 A;  4KEF A;  3FFK A;  1P8Z G;  1PCX A;  1WFS A;  5KYX A;  1NPH A;  2VIL A;  3EFO B;  5KYY A;  3CJB G;  5L6W C;  3FG7 A;  5A1M A;  5FAF A;  2FH4 A;  1MDU A;  3A5L S;  2VAC A;  1P8X A;  1VFQ A;  2FGH A;  4BEX 1;  1AK6 A;  2XFA A;  5KYN A;  1UDM A;  2FH2 A;  1CNU A;  5DD2 A;  2I2Q A;  1WM4 A;  1VKK A;  3A5O S;  3CI5 G;  3EH1 A;  1NLV G;  3EGX A;  1X67 A;  2VIK A;  3L50 A;  5FAE A;  1TMW A;  2FF6 G;  4S10 C;  2LLF A;  2LXX A;  1D0N A;  3EG9 A;  1HQZ 1;  1M2O A;  1T2L A;  3EH2 A;  2LJ8 A;  5KYW A;  1T44 G;  2L72 A;  2FH3 A;  1NMD G;  2KVK A;  1KCQ A;  3Q2B A;  4PKH B;  2NUT A;  1ESV S;  4JD2 H;  3FFN A;  2MOT A;  1PD1 A;  5KYU B;  1COF A;  3EGD B;  1F7S A;  1C0F S;  3CJC G;  4CBX G;  1T3X A;  1T3Y A;  1M2V A;  2FH1 A;  2NUP B;  1Q8X A;  4PKG G;  1V6F A;  3EFO A;  1TVJ A;  5IVU A;  3A5M S;  1YAG G;  5HVK D;  3TU5 B;  1SVQ A;  4PKI G;  2MV2 A;  1AK7 A;  5KYX B;  1DEJ S;  5KYY B;  1JHW A;  1QPV A;  4KED A;  1M4J A;  1Q8G A;  1SVR A;  1EQY S;  2W0I A;  3DAW B;  1J72 A;  4LIZ A; 
#chains in the Genus database with same CATH topology
 2MP4 A;  1NM1 G;  1M2V B;  3EGX B;  2QTV A;  1C0G S;  2D8B A;  4Z94 G;  1RGI G;  3EG9 B;  5KYU A;  1PD0 A;  4CBW G;  3A5N S;  3EGD A;  5KYW B;  2XF1 A;  4KEE A;  1H1V G;  1D4X G;  1WNJ A;  1AHQ A;  1YVN G;  2NUT B;  3FG6 A;  1CFY A;  5HVK B;  2NUP A;  1SVY A;  3CIP G;  4CBU G;  2FF3 A;  2HD7 A;  4KEF A;  3FFK A;  1P8Z G;  1PCX A;  1WFS A;  5KYX A;  1NPH A;  2VIL A;  3EFO B;  5KYY A;  3CJB G;  5L6W C;  3FG7 A;  5A1M A;  5FAF A;  2FH4 A;  1MDU A;  3A5L S;  2VAC A;  1P8X A;  1VFQ A;  2FGH A;  4BEX 1;  1AK6 A;  2XFA A;  5KYN A;  1UDM A;  2FH2 A;  1CNU A;  5DD2 A;  2I2Q A;  1WM4 A;  1VKK A;  3DA7 A;  3A5O S;  3CI5 G;  3EH1 A;  1NLV G;  3EGX A;  1X67 A;  2VIK A;  3L50 A;  5FAE A;  1TMW A;  2FF6 G;  4S10 C;  2LLF A;  2LXX A;  1D0N A;  3EG9 A;  1HQZ 1;  1M2O A;  1T2L A;  3EH2 A;  2LJ8 A;  5KYW A;  1T44 G;  2L72 A;  2FH3 A;  1NMD G;  2KVK A;  1KCQ A;  3Q2B A;  4PKH B;  2NUT A;  1ESV S;  4JD2 H;  3FFN A;  2MOT A;  1PD1 A;  5KYU B;  1COF A;  3EGD B;  1F7S A;  1C0F S;  3CJC G;  4CBX G;  1T3X A;  1T3Y A;  1M2V A;  2FH1 A;  2NUP B;  1Q8X A;  4PKG G;  1V6F A;  3EFO A;  1TVJ A;  5IVU A;  3A5M S;  1YAG G;  5HVK D;  3TU5 B;  1SVQ A;  4PKI G;  2MV2 A;  1AK7 A;  5KYX B;  1DEJ S;  5KYY B;  1JHW A;  1QPV A;  4KED A;  1M4J A;  1Q8G A;  1SVR A;  1EQY S;  2W0I A;  3DAW B;  1J72 A;  4LIZ A; 
#chains in the Genus database with same CATH homology
 2MP4 A;  1NM1 G;  1M2V B;  3EGX B;  2QTV A;  1C0G S;  2D8B A;  4Z94 G;  1RGI G;  3EG9 B;  5KYU A;  1PD0 A;  4CBW G;  3A5N S;  3EGD A;  5KYW B;  2XF1 A;  4KEE A;  1H1V G;  1D4X G;  1WNJ A;  1AHQ A;  1YVN G;  2NUT B;  3FG6 A;  1CFY A;  5HVK B;  2NUP A;  1SVY A;  3CIP G;  4CBU G;  2FF3 A;  2HD7 A;  4KEF A;  3FFK A;  1P8Z G;  1PCX A;  1WFS A;  5KYX A;  1NPH A;  2VIL A;  3EFO B;  5KYY A;  3CJB G;  5L6W C;  3FG7 A;  5A1M A;  5FAF A;  2FH4 A;  1MDU A;  3A5L S;  2VAC A;  1P8X A;  1VFQ A;  2FGH A;  4BEX 1;  1AK6 A;  2XFA A;  5KYN A;  1UDM A;  2FH2 A;  1CNU A;  5DD2 A;  2I2Q A;  1WM4 A;  1VKK A;  3DA7 A;  3A5O S;  3CI5 G;  3EH1 A;  1NLV G;  3EGX A;  1X67 A;  2VIK A;  3L50 A;  5FAE A;  1TMW A;  2FF6 G;  4S10 C;  2LLF A;  2LXX A;  1D0N A;  3EG9 A;  1HQZ 1;  1M2O A;  1T2L A;  3EH2 A;  2LJ8 A;  5KYW A;  1T44 G;  2L72 A;  2FH3 A;  1NMD G;  2KVK A;  1KCQ A;  3Q2B A;  4PKH B;  2NUT A;  1ESV S;  4JD2 H;  3FFN A;  2MOT A;  1PD1 A;  5KYU B;  1COF A;  3EGD B;  1F7S A;  1C0F S;  3CJC G;  4CBX G;  1T3X A;  1T3Y A;  1M2V A;  2FH1 A;  2NUP B;  1Q8X A;  4PKG G;  1V6F A;  3EFO A;  1TVJ A;  5IVU A;  3A5M S;  1YAG G;  5HVK D;  3TU5 B;  1SVQ A;  4PKI G;  2MV2 A;  1AK7 A;  5KYX B;  1DEJ S;  5KYY B;  1JHW A;  1QPV A;  4KED A;  1M4J A;  1Q8G A;  1SVR A;  1EQY S;  2W0I A;  3DAW B;  1J72 A;  4LIZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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