1T5FA

Arginase i-aoh complex
Total Genus 113
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
113
sequence length
314
structure length
314
Chain Sequence
KPIEIIGAPFSKGCPRGGVEKGPAALRKAGLVEKLKETEYNVRDHGDLAFVDVPNDSPFQIVKNPRSVGKANEQLAAVVAETQKNGTISVVLGGDHSMAIGSISGHARVHPDLAVIWVDAHTDINTPLTTSSGNLAGQPVAFLLKELKGKFPDVPGFSWVTPAISAKDIVYIGLRDVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNPTLGKTPEEVTRTVNTAVALTLSAFGTKREGNHKPETDYL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Arginase 1
publication title Design of amino acid aldehydes as transition-state analogue inhibitors of arginase
pubmed doi rcsb
source organism Rattus norvegicus
total genus 113
structure length 314
sequence length 314
chains with identical sequence B, C
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2004-05-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 1t5fA00
3E9BA 5RLAA 1T4RA 1CEVA 3E8ZA 2CEVA 2PLLA 4ITYA 4Q3TA 4FCKA 4MYNA 3MFWA 4Q3RA 1RLAA 4Q3VA 4GSMA 3TF3A 3LP7A 1P8MA 4Q40A 1GQ7A 2EF4A 3GMZA 5CEVA 4GWDA 1TBLA 3CEVA 1P8QA 4IU5A 3SL1A 3THEA 1TA1A 3E6KA 3GN0A 5HJAA 2ZAVA 3THHA 3MJLA 4IE1A 4CEVA 4DZ4A 3SJTA 1T4PA 1WOIA 4Q41A 1HQFA 1PQ3A 4IXVA 1HQXA 1WOHA 1T4SA 3NIOA 1P8NA 4IE2A 1TBJA 4I06A 1T5GA 4RHKA 2EIVA 3F80A 4FCIA 3NIQA 1WVAA 3MMRA 4RLAA 1HQGA 1P8PA 2PHAA 1WOGA 4MYLA 1P8SA 3THJA 3LP4A 1ZPGA 4Q3SA 3NIPA 4HXQA 2EF5A 4Q3QA 4RHMA 4Q3RC 4MYFA 3SL0A 1GQ6A 1HQ5A 3SKKA 4MXRA 4IU4A 4Q3PA 1TBHA 3E8QA 4HZEA 3DJ8A 4HWWA 3LHLA 1T5FA 4IXUA 3TH7A 4Q3UA 3RLAA 3M1RA 1D3VA 2PHOA 4RHJA 4RHIA 5HJ9A 1P8RA 1R1OA 4GSVA 3E6VA 2A0MA 4MYKA 4IU0A 1XFKA 4IU1A 2AEBA 1HQHA 3PZLA 1P8OA 4GWCA 1T4TA 4Q42A 1WVBA 4RHLA 4GSZA 4G3HA 4RHQA 1ZPEA 2RLAA 3MFVA 3KV2A 4IE3A
chains in the Genus database with same CATH superfamily
3C10A 5G1CA 3ZNSA 3E9BA 5G17A 2VCGA 4LY1A 5RLAA 1T64A 5A2SA 1T4RA 1CEVA 3E8ZA 2GH6A 1T69A 4RN0A 2CEVA 2PLLA 2VQJA 5DC7A 5EEIA 4ITYA 5THUA 5JI5A 4Q3TA 4FCKA 4MYNA 3MFWA 4Q3RA 1RLAA 4Q3VA 4GSMA 5G0JA 3TF3A 3LP7A 1P8MA 4Q40A 3C0ZA 1GQ7A 5BWZA 5THSA 4CBTA 5ICNB 2EF4A 4ZUMA 3SFHA 3GMZA 4BZ9A 5CEVA 4GWDA 1TBLA 3CEVA 1P8QA 4IU5A 3MZ7A 5D1BA 4ZURA 2V5XA 3SL1A 1TA1A 3THEA 4CQFA 3E6KA 4BZ8A 4QA3A 1ZZ1A 3GN0A 5HJAA 2ZAVA 3ZNRA 3THHA 3MJLA 4IE1A 4CEVA 4DZ4A 2VQVA 4QA6A 1T4PA 3SJTA 4QA7A 1WOIA 5G3WA 4Q41A 1HQFA 5EEKA 5G0YA 1PQ3A 4QA0A 4IXVA 4BZ5A 1HQXA 1WOHA 1T4SA 4RN2A 3NIOA 5EEFA 5EFJD 3EWFA 1P8NA 4IE2A 1TBJA 4QA2A 4I06A 5EFBD 4QA4A 4RHKA 2EIVA 4BKXB 2V5WA 3F80A 3Q9CA 4FCIA 5THVA 3NIQA 1WVAA 3MZ4A 5G1AA 4ZUPA 3MMRA 4RLAA 2VQQA 1HQGA 1P8PA 2PHAA 5EEMA 5FUEA 5THTA 1WOGA 4MYLA 1P8SA 3THJA 5DC8A 3LP4A 1ZPGA 4Q3SA 5LI3A 1C3SA 4ZUNA 1C3RA 3NIPA 4HXQA 2EF5A 5IX0A 4Q3QA 5G1BA 4RHMA 5DC5A 4Q3RC 3RQDA 4MYFA 5DC6A 5G10A 5D1DA 3SL0A 1GQ6A 1HQ5A 3Q9EA 4RN1A 3F06A 3SKKA 5EF7A 4MXRA 2VQMA 3MAXA 4IU4A 4Q3PA 1TBHA 3MZ6A 3E8QA 4LXZA 4HZEA 3C0YA 4BZ6A 5EF8A 3EZTA 3SFFA 1T67A 3DJ8A 3EZPA 5G0XA 4A69A 4HWWA 3MZ3A 3LHLA 3EW8A 1T5FA 1ZZ0A 1W22A 4IXUA 5G0IA 3Q9BA 4QA1A 4Q3UA 3TH7A 3RLAA 3Q9FA 3M1RA 1D3VA 2PHOA 4RHJA 4RHIA 5HJ9A 1P8RA 3F0RA 1R1OA 4GSVA 4BZ7A 5G0GA 5EFNA 3KV2A 4ZUOA 3E6VA 2A0MA 4MYKA 5EENA 4IU0A 1XFKA 5G11A 4IU1A 4ZUQA 2AEBA 1HQHA 3PZLA 5EFGA 5EFHA 5G0HA 1C3PA 1P8OA 5EFKB 5G12A 5D1CA 4GWCA 5IWGA 1T4TA 4Q42A 1WVBA 5G13A 3F07A 4RHLA 4CBYA 4GSZA 1ZZ3A 4G3HA 1VKGA 4RHQA 3MENA 1ZPEA 2RLAA 2VQOA 3MFVA 1T5GA 4IE3A 4QA5A 5FCWA 2VQWG
chains in the Genus database with same CATH topology
3E9BA 5RLAA 1T4RA 1CEVA 3E8ZA 2CEVA 2PLLA 4ITYA 4Q3TA 4FCKA 4MYNA 3MFWA 4Q3RA 1RLAA 4Q3VA 4GSMA 3TF3A 3LP7A 1P8MA 4Q40A 1GQ7A 2EF4A 3GMZA 5CEVA 4GWDA 1TBLA 3CEVA 1P8QA 4IU5A 3SL1A 3THEA 1TA1A 3E6KA 3GN0A 5HJAA 2ZAVA 3THHA 3MJLA 4IE1A 4CEVA 4DZ4A 3SJTA 1T4PA 1WOIA 4Q41A 1HQFA 1PQ3A 4IXVA 1HQXA 1WOHA 1T4SA 3NIOA 1P8NA 4IE2A 1TBJA 4I06A 1T5GA 4RHKA 2EIVA 3F80A 4FCIA 3NIQA 1WVAA 3MMRA 4RLAA 1HQGA 1P8PA 2PHAA 1WOGA 4MYLA 1P8SA 3THJA 3LP4A 1ZPGA 4Q3SA 3NIPA 4HXQA 2EF5A 4Q3QA 4RHMA 4Q3RC 4MYFA 3SL0A 1GQ6A 1HQ5A 3SKKA 4MXRA 4IU4A 4Q3PA 1TBHA 3E8QA 4HZEA 3DJ8A 4HWWA 3LHLA 1T5FA 4IXUA 3TH7A 4Q3UA 3RLAA 3M1RA 1D3VA 2PHOA 4RHJA 4RHIA 5HJ9A 1P8RA 1R1OA 4GSVA 3E6VA 2A0MA 4MYKA 4IU0A 1XFKA 4IU1A 2AEBA 1HQHA 3PZLA 1P8OA 4GWCA 1T4TA 4Q42A 1WVBA 4RHLA 4GSZA 4G3HA 4RHQA 1ZPEA 2RLAA 3MFVA 3KV2A 4IE3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3E9B A;  5RLA A;  1T4R A;  1CEV A;  3E8Z A;  2CEV A;  2PLL A;  4ITY A;  4Q3T A;  4FCK A;  4MYN A;  3MFW A;  4Q3R A;  1RLA A;  4Q3V A;  4GSM A;  3TF3 A;  3LP7 A;  1P8M A;  4Q40 A;  1GQ7 A;  2EF4 A;  3GMZ A;  5CEV A;  4GWD A;  1TBL A;  3CEV A;  1P8Q A;  4IU5 A;  3SL1 A;  3THE A;  1TA1 A;  3E6K A;  3GN0 A;  5HJA A;  2ZAV A;  3THH A;  3MJL A;  4IE1 A;  4CEV A;  4DZ4 A;  3SJT A;  1T4P A;  1WOI A;  4Q41 A;  1HQF A;  1PQ3 A;  4IXV A;  1HQX A;  1WOH A;  1T4S A;  3NIO A;  1P8N A;  4IE2 A;  1TBJ A;  4I06 A;  1T5G A;  4RHK A;  2EIV A;  3F80 A;  4FCI A;  3NIQ A;  1WVA A;  3MMR A;  4RLA A;  1HQG A;  1P8P A;  2PHA A;  1WOG A;  4MYL A;  1P8S A;  3THJ A;  3LP4 A;  1ZPG A;  4Q3S A;  3NIP A;  4HXQ A;  2EF5 A;  4Q3Q A;  4RHM A;  4Q3R C;  4MYF A;  3SL0 A;  1GQ6 A;  1HQ5 A;  3SKK A;  4MXR A;  4IU4 A;  4Q3P A;  1TBH A;  3E8Q A;  4HZE A;  3DJ8 A;  4HWW A;  3LHL A;  1T5F A;  4IXU A;  3TH7 A;  4Q3U A;  3RLA A;  3M1R A;  1D3V A;  2PHO A;  4RHJ A;  4RHI A;  5HJ9 A;  1P8R A;  1R1O A;  4GSV A;  3E6V A;  2A0M A;  4MYK A;  4IU0 A;  1XFK A;  4IU1 A;  2AEB A;  1HQH A;  3PZL A;  1P8O A;  4GWC A;  1T4T A;  4Q42 A;  1WVB A;  4RHL A;  4GSZ A;  4G3H A;  4RHQ A;  1ZPE A;  2RLA A;  3MFV A;  3KV2 A;  4IE3 A; 
#chains in the Genus database with same CATH topology
 3C10 A;  5G1C A;  3ZNS A;  3E9B A;  5G17 A;  2VCG A;  4LY1 A;  5RLA A;  1T64 A;  5A2S A;  1T4R A;  1CEV A;  3E8Z A;  2GH6 A;  1T69 A;  4RN0 A;  2CEV A;  2PLL A;  2VQJ A;  5DC7 A;  5EEI A;  4ITY A;  5THU A;  5JI5 A;  4Q3T A;  4FCK A;  4MYN A;  3MFW A;  4Q3R A;  1RLA A;  4Q3V A;  4GSM A;  5G0J A;  3TF3 A;  3LP7 A;  1P8M A;  4Q40 A;  3C0Z A;  1GQ7 A;  5BWZ A;  5THS A;  4CBT A;  5ICN B;  2EF4 A;  4ZUM A;  3SFH A;  3GMZ A;  4BZ9 A;  5CEV A;  4GWD A;  1TBL A;  3CEV A;  1P8Q A;  4IU5 A;  3MZ7 A;  5D1B A;  4ZUR A;  2V5X A;  3SL1 A;  1TA1 A;  3THE A;  4CQF A;  3E6K A;  4BZ8 A;  4QA3 A;  1ZZ1 A;  3GN0 A;  5HJA A;  2ZAV A;  3ZNR A;  3THH A;  3MJL A;  4IE1 A;  4CEV A;  4DZ4 A;  2VQV A;  4QA6 A;  1T4P A;  3SJT A;  4QA7 A;  1WOI A;  5G3W A;  4Q41 A;  1HQF A;  5EEK A;  5G0Y A;  1PQ3 A;  4QA0 A;  4IXV A;  4BZ5 A;  1HQX A;  1WOH A;  1T4S A;  4RN2 A;  3NIO A;  5EEF A;  5EFJ D;  3EWF A;  1P8N A;  4IE2 A;  1TBJ A;  4QA2 A;  4I06 A;  5EFB D;  4QA4 A;  4RHK A;  2EIV A;  4BKX B;  2V5W A;  3F80 A;  3Q9C A;  4FCI A;  5THV A;  3NIQ A;  1WVA A;  3MZ4 A;  5G1A A;  4ZUP A;  3MMR A;  4RLA A;  2VQQ A;  1HQG A;  1P8P A;  2PHA A;  5EEM A;  5FUE A;  5THT A;  1WOG A;  4MYL A;  1P8S A;  3THJ A;  5DC8 A;  3LP4 A;  1ZPG A;  4Q3S A;  5LI3 A;  1C3S A;  4ZUN A;  1C3R A;  3NIP A;  4HXQ A;  2EF5 A;  5IX0 A;  4Q3Q A;  5G1B A;  4RHM A;  5DC5 A;  4Q3R C;  3RQD A;  4MYF A;  5DC6 A;  5G10 A;  5D1D A;  3SL0 A;  1GQ6 A;  1HQ5 A;  3Q9E A;  4RN1 A;  3F06 A;  3SKK A;  5EF7 A;  4MXR A;  2VQM A;  3MAX A;  4IU4 A;  4Q3P A;  1TBH A;  3MZ6 A;  3E8Q A;  4LXZ A;  4HZE A;  3C0Y A;  4BZ6 A;  5EF8 A;  3EZT A;  3SFF A;  1T67 A;  3DJ8 A;  3EZP A;  5G0X A;  4A69 A;  4HWW A;  3MZ3 A;  3LHL A;  3EW8 A;  1T5F A;  1ZZ0 A;  1W22 A;  4IXU A;  5G0I A;  3Q9B A;  4QA1 A;  4Q3U A;  3TH7 A;  3RLA A;  3Q9F A;  3M1R A;  1D3V A;  2PHO A;  4RHJ A;  4RHI A;  5HJ9 A;  1P8R A;  3F0R A;  1R1O A;  4GSV A;  4BZ7 A;  5G0G A;  5EFN A;  3KV2 A;  4ZUO A;  3E6V A;  2A0M A;  4MYK A;  5EEN A;  4IU0 A;  1XFK A;  5G11 A;  4IU1 A;  4ZUQ A;  2AEB A;  1HQH A;  3PZL A;  5EFG A;  5EFH A;  5G0H A;  1C3P A;  1P8O A;  5EFK B;  5G12 A;  5D1C A;  4GWC A;  5IWG A;  1T4T A;  4Q42 A;  1WVB A;  5G13 A;  3F07 A;  4RHL A;  4CBY A;  4GSZ A;  1ZZ3 A;  4G3H A;  1VKG A;  4RHQ A;  3MEN A;  1ZPE A;  2RLA A;  2VQO A;  3MFV A;  1T5G A;  4IE3 A;  4QA5 A;  5FCW A;  2VQW G; 
#chains in the Genus database with same CATH homology
 3E9B A;  5RLA A;  1T4R A;  1CEV A;  3E8Z A;  2CEV A;  2PLL A;  4ITY A;  4Q3T A;  4FCK A;  4MYN A;  3MFW A;  4Q3R A;  1RLA A;  4Q3V A;  4GSM A;  3TF3 A;  3LP7 A;  1P8M A;  4Q40 A;  1GQ7 A;  2EF4 A;  3GMZ A;  5CEV A;  4GWD A;  1TBL A;  3CEV A;  1P8Q A;  4IU5 A;  3SL1 A;  3THE A;  1TA1 A;  3E6K A;  3GN0 A;  5HJA A;  2ZAV A;  3THH A;  3MJL A;  4IE1 A;  4CEV A;  4DZ4 A;  3SJT A;  1T4P A;  1WOI A;  4Q41 A;  1HQF A;  1PQ3 A;  4IXV A;  1HQX A;  1WOH A;  1T4S A;  3NIO A;  1P8N A;  4IE2 A;  1TBJ A;  4I06 A;  1T5G A;  4RHK A;  2EIV A;  3F80 A;  4FCI A;  3NIQ A;  1WVA A;  3MMR A;  4RLA A;  1HQG A;  1P8P A;  2PHA A;  1WOG A;  4MYL A;  1P8S A;  3THJ A;  3LP4 A;  1ZPG A;  4Q3S A;  3NIP A;  4HXQ A;  2EF5 A;  4Q3Q A;  4RHM A;  4Q3R C;  4MYF A;  3SL0 A;  1GQ6 A;  1HQ5 A;  3SKK A;  4MXR A;  4IU4 A;  4Q3P A;  1TBH A;  3E8Q A;  4HZE A;  3DJ8 A;  4HWW A;  3LHL A;  1T5F A;  4IXU A;  3TH7 A;  4Q3U A;  3RLA A;  3M1R A;  1D3V A;  2PHO A;  4RHJ A;  4RHI A;  5HJ9 A;  1P8R A;  1R1O A;  4GSV A;  3E6V A;  2A0M A;  4MYK A;  4IU0 A;  1XFK A;  4IU1 A;  2AEB A;  1HQH A;  3PZL A;  1P8O A;  4GWC A;  1T4T A;  4Q42 A;  1WVB A;  4RHL A;  4GSZ A;  4G3H A;  4RHQ A;  1ZPE A;  2RLA A;  3MFV A;  3KV2 A;  4IE3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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