1TBNA

Nmr structure of a protein kinase c-g phorbol-binding domain, minimized average structure
Total Genus 6
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
6
sequence length
66
structure length
66
Chain Sequence
QTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHTERR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Calcium-binding protein
molecule keywords PROTEIN KINASE C, GAMMA TYPE
publication title NMR structure of a protein kinase C-gamma phorbol-binding domain and study of protein-lipid micelle interactions.
pubmed doi rcsb
source organism Rattus rattus
total genus 6
structure length 66
sequence length 66
ec nomenclature ec 2.7.11.13: Protein kinase C.
pdb deposition date 1997-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00130 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1tbnA00
2QQEA 2JA1A 2ENNA 2FNFX 2ORWA 4L9MA 3UGIA 1PTRA 1TBNA 1RFHA 4FKDA 3UEJA 3UGDA 3KY9A 2GVIA 2WVJA 2QPOA 3E2IA 2ORVA 2QQ0A 1FAQA 5FUWA 2ROWA 3BJIA 2YUUA 1XA6A 5FUYA 3UGLA 2DB6A 4UXIA 1KBFA 5FUVA 2E73A 1TBOA 1KBEA 1PTQA 2J9RA 4UXHA 1FARA 2J87A 1W4RA 3UFFA 2B8TA 2UZ3A 2ELIA 3UEYA 2VRWB 1R79A 1Y8FA 4B6DA 5FUXA 3CXLA 1XBTA 2ENZA 1XX6A 4UXJA
chains in the Genus database with same CATH superfamily
1BMOA 3R5AA 5EX3A 1UVGA 2V53A 2FNFX 1TBQR 4L9MA 3UGIA 2LB7A 2XRCA 5EX0A 1TBNA 2OVOA 3RU0A 1SGNI 2V1CA 4OVOA 1OMTA 1IW4A 2LEOA 2ORVA 2RIJA 3TOAA 1IY6A 5FUWA 1AN1I 1CGII 2W0TA 3OL0A 2OU2A 3TO9A 1TGSI 1XA6A 1UVFA 1M8CA 2DB6A 1CT0I 1Q9BA 2GKTI 3PDNA 4UXIA 5FUYA 5JHWC 1P9GA 4E1PA 5J8FA 1MJ9A 1IY5A 2SGDI 2KMPA 3QAHA 1WGTA 3UFFA 1HJAI 3SGBI 1U5KA 1PJUA 2WCYA 1N13A 2GIVA 3B4VC 3OVOA 1SGRI 1R0RI 4B6DA 3CXLA 1XBTA 1OVOA 2CWHA 1CSOI 1K7VA 2F3CI 2JZMA 1Z2IA 2JA1A 2KMRA 2NU2I 2K9HA 1ULKA 1PTRA 5HQ8A 1SGPI 1WKXA 1OYVI 3FSYA 1BUSA 3UGDA 4MPIA 1Y1CA 3TOBA 1NXUA 1HEVA 1HPTA 1ULMA 1FAQA 1V1IA 1CHOI 2LUYA 2YUUA 2V1CC 3FSXA 3OXFA 2SGEI 2X52A 1KBFA 2Y0MA 1TBOA 2N71A 1KBEA 2E5RA 1MJBA 3D00A 4AMLA 1FYBA 1LR8A 2J9RA 2L7XA 4UXHA 3TJQA 4E1RA 2L8EA 4HGUA 1W4RA 3VE5A 2B8TA 3R5BA 4WP4A 2VRWB 3TO6A 2OZUA 1VDDA 3E59A 2KMOA 4GI3C 1HDLA 1W3SA 1CT2I 2ENZA 2SGQI 1XX6A 4UXJA 3R5CA 1UUCA 2QQEA 2ENNA 2N52A 2ORWA 2NU3I 2ARPF 1NUBA 2X3TA 1SGDI 2DIPA 4A24A 5E3RA 3GOXA 3UEJA 1MJAA 2ERWA 9WGAA 2GVIA 5CCMA 1H0ZA 3E2IA 2QQ0A 5J8CA 2M5XA 2ROWA 1WTJA 2JW6A 3BJIA 2JYYA 1TOTA 2A20A 3UGLA 7WGAA 1CE3A 2DKVA 2GKVA 2E73A 1M8BA 1TIHA 1MT1A 3VDPA 4DNCA 3OXLA 1FARA 2BUSA 2N1AB 5E3QA 1PCEA 3QWPA 1ULNA 1CT4I 2NU1I 1K7UA 1Y1BA 2SGPI 2SGFI 1R79A 3R5DA 3TO7A 1Y8FA 2NU0I 2GKRI 3SEKC 3VDUA 2CWFA 1YTPA 1Z7KB 1SGQI 3OXGA 1CGJI 1P9ZA 1S20A 1RFHA 4FKDA 2QQDA 3KY9A 1SGYI 2KCXA 2YQPA 2WVJA 5DAEA 2QPOA 4JCVE 2ODDA 1YU6C 1UHAA 2N17A 1DS3I 1TURA 1PPFI 1X74A 5FUVA 1DS2I 1V1HA 1FY7A 1PTQA 4SGBI 3UOEA 3MEKA 1OMUA 3QTLD 1KMAA 1SGEI 1LR9A 2CJSC 2CWGA 2J87A 2QQCA 1K7TA 1TUSA 2RC4A 1TBRR 2B0UC 2PQ8A 2NU4I 2ELIA 1WGCA 2UVOA 2UZ3A 3HH2C 3UEYA 3SGQI 5CCLA 3FC3A 2OD1A 2JXDA 2P6AC 2WGCA 1LR7A 1X4SA 2KMQA 5FUXA 5HI7A 5E3PA
chains in the Genus database with same CATH topology
1BMOA 5EX3A 1UVGA 2V53A 2FNFX 1TBQR 4L9MA 3UGIA 5EX0A 1TBNA 2OVOA 3RU0A 1SGNI 2V1CA 4OVOA 1OMTA 1IW4A 2LEOA 2ORVA 1IY6A 5FUWA 1AN1I 1CGII 2W0TA 3OL0A 1TGSI 1XA6A 1UVFA 1M8CA 2DB6A 1CT0I 2GKTI 3PDNA 4UXIA 5FUYA 5JHWC 4E1PA 1IY5A 2SGDI 2KMPA 3UFFA 1HJAI 3SGBI 1U5KA 1PJUA 2WCYA 1N13A 3B4VC 3OVOA 1SGRI 1R0RI 4B6DA 3CXLA 1XBTA 1OVOA 1CSOI 2F3CI 2JZMA 2JA1A 2KMRA 2NU2I 2K9HA 1PTRA 5HQ8A 1SGPI 1OYVI 1BUSA 3UGDA 1Y1CA 1HPTA 1FAQA 1V1IA 1CHOI 2LUYA 2YUUA 3OXFA 2SGEI 1KBFA 1TBOA 2N71A 1KBEA 2E5RA 3D00A 1FYBA 1LR8A 2J9RA 2L7XA 4UXHA 3TJQA 4E1RA 2L8EA 4HGUA 1W4RA 3VE5A 2B8TA 2VRWB 3E59A 1VDDA 2KMOA 4GI3C 1HDLA 1W3SA 1CT2I 2ENZA 2SGQI 1XX6A 4UXJA 1UUCA 2QQEA 2ENNA 2N52A 2ORWA 2NU3I 2ARPF 1NUBA 1SGDI 2DIPA 4A24A 3GOXA 3UEJA 2ERWA 2GVIA 5CCMA 1H0ZA 3E2IA 2QQ0A 2M5XA 2ROWA 2JW6A 3BJIA 2JYYA 1TOTA 2A20A 3UGLA 1CE3A 2GKVA 2E73A 1M8BA 1TIHA 1MT1A 3VDPA 3OXLA 1FARA 2BUSA 2N1AB 1PCEA 3QWPA 1CT4I 2NU1I 1Y1BA 2SGPI 2SGFI 1R79A 1Y8FA 2NU0I 2GKRI 3SEKC 3VDUA 1YTPA 1Z7KB 1SGQI 3OXGA 1CGJI 4FKDA 1RFHA 2QQDA 3KY9A 1SGYI 2KCXA 2YQPA 2WVJA 5DAEA 2QPOA 4JCVE 2ODDA 1YU6C 2N17A 1DS3I 1TURA 1PPFI 1X74A 5FUVA 1DS2I 1V1HA 4SGBI 1PTQA 1KMAA 3MEKA 1OMUA 3QTLD 1SGEI 1LR9A 2CJSC 2J87A 2QQCA 2XRCA 2V1CC 1TUSA 3HH2C 1TBRR 2B0UC 2NU4I 2ELIA 2UZ3A 5CCLA 3UEYA 3SGQI 3FC3A 2OD1A 2JXDA 2P6AC 1LR7A 1X4SA 2KMQA 5FUXA 5HI7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2QQE A;  2JA1 A;  2ENN A;  2FNF X;  2ORW A;  4L9M A;  3UGI A;  1PTR A;  1TBN A;  1RFH A;  4FKD A;  3UEJ A;  3UGD A;  3KY9 A;  2GVI A;  2WVJ A;  2QPO A;  3E2I A;  2ORV A;  2QQ0 A;  1FAQ A;  5FUW A;  2ROW A;  3BJI A;  2YUU A;  1XA6 A;  5FUY A;  3UGL A;  2DB6 A;  4UXI A;  1KBF A;  5FUV A;  2E73 A;  1TBO A;  1KBE A;  1PTQ A;  2J9R A;  4UXH A;  1FAR A;  2J87 A;  1W4R A;  3UFF A;  2B8T A;  2UZ3 A;  2ELI A;  3UEY A;  2VRW B;  1R79 A;  1Y8F A;  4B6D A;  5FUX A;  3CXL A;  1XBT A;  2ENZ A;  1XX6 A;  4UXJ A; 
#chains in the Genus database with same CATH topology
 1BMO A;  3R5A A;  5EX3 A;  1UVG A;  2V53 A;  2FNF X;  1TBQ R;  4L9M A;  3UGI A;  2LB7 A;  2XRC A;  5EX0 A;  1TBN A;  2OVO A;  3RU0 A;  1SGN I;  2V1C A;  4OVO A;  1OMT A;  1IW4 A;  2LEO A;  2ORV A;  2RIJ A;  3TOA A;  1IY6 A;  5FUW A;  1AN1 I;  1CGI I;  2W0T A;  3OL0 A;  2OU2 A;  3TO9 A;  1TGS I;  1XA6 A;  1UVF A;  1M8C A;  2DB6 A;  1CT0 I;  1Q9B A;  2GKT I;  3PDN A;  4UXI A;  5FUY A;  5JHW C;  1P9G A;  4E1P A;  5J8F A;  1MJ9 A;  1IY5 A;  2SGD I;  2KMP A;  3QAH A;  1WGT A;  3UFF A;  1HJA I;  3SGB I;  1U5K A;  1PJU A;  2WCY A;  1N13 A;  2GIV A;  3B4V C;  3OVO A;  1SGR I;  1R0R I;  4B6D A;  3CXL A;  1XBT A;  1OVO A;  2CWH A;  1CSO I;  1K7V A;  2F3C I;  2JZM A;  1Z2I A;  2JA1 A;  2KMR A;  2NU2 I;  2K9H A;  1ULK A;  1PTR A;  5HQ8 A;  1SGP I;  1WKX A;  1OYV I;  3FSY A;  1BUS A;  3UGD A;  4MPI A;  1Y1C A;  3TOB A;  1NXU A;  1HEV A;  1HPT A;  1ULM A;  1FAQ A;  1V1I A;  1CHO I;  2LUY A;  2YUU A;  2V1C C;  3FSX A;  3OXF A;  2SGE I;  2X52 A;  1KBF A;  2Y0M A;  1TBO A;  2N71 A;  1KBE A;  2E5R A;  1MJB A;  3D00 A;  4AML A;  1FYB A;  1LR8 A;  2J9R A;  2L7X A;  4UXH A;  3TJQ A;  4E1R A;  2L8E A;  4HGU A;  1W4R A;  3VE5 A;  2B8T A;  3R5B A;  4WP4 A;  2VRW B;  3TO6 A;  2OZU A;  1VDD A;  3E59 A;  2KMO A;  4GI3 C;  1HDL A;  1W3S A;  1CT2 I;  2ENZ A;  2SGQ I;  1XX6 A;  4UXJ A;  3R5C A;  1UUC A;  2QQE A;  2ENN A;  2N52 A;  2ORW A;  2NU3 I;  2ARP F;  1NUB A;  2X3T A;  1SGD I;  2DIP A;  4A24 A;  5E3R A;  3GOX A;  3UEJ A;  1MJA A;  2ERW A;  9WGA A;  2GVI A;  5CCM A;  1H0Z A;  3E2I A;  2QQ0 A;  5J8C A;  2M5X A;  2ROW A;  1WTJ A;  2JW6 A;  3BJI A;  2JYY A;  1TOT A;  2A20 A;  3UGL A;  7WGA A;  1CE3 A;  2DKV A;  2GKV A;  2E73 A;  1M8B A;  1TIH A;  1MT1 A;  3VDP A;  4DNC A;  3OXL A;  1FAR A;  2BUS A;  2N1A B;  5E3Q A;  1PCE A;  3QWP A;  1ULN A;  1CT4 I;  2NU1 I;  1K7U A;  1Y1B A;  2SGP I;  2SGF I;  1R79 A;  3R5D A;  3TO7 A;  1Y8F A;  2NU0 I;  2GKR I;  3SEK C;  3VDU A;  2CWF A;  1YTP A;  1Z7K B;  1SGQ I;  3OXG A;  1CGJ I;  1P9Z A;  1S20 A;  1RFH A;  4FKD A;  2QQD A;  3KY9 A;  1SGY I;  2KCX A;  2YQP A;  2WVJ A;  5DAE A;  2QPO A;  4JCV E;  2ODD A;  1YU6 C;  1UHA A;  2N17 A;  1DS3 I;  1TUR A;  1PPF I;  1X74 A;  5FUV A;  1DS2 I;  1V1H A;  1FY7 A;  1PTQ A;  4SGB I;  3UOE A;  3MEK A;  1OMU A;  3QTL D;  1KMA A;  1SGE I;  1LR9 A;  2CJS C;  2CWG A;  2J87 A;  2QQC A;  1K7T A;  1TUS A;  2RC4 A;  1TBR R;  2B0U C;  2PQ8 A;  2NU4 I;  2ELI A;  1WGC A;  2UVO A;  2UZ3 A;  3HH2 C;  3UEY A;  3SGQ I;  5CCL A;  3FC3 A;  2OD1 A;  2JXD A;  2P6A C;  2WGC A;  1LR7 A;  1X4S A;  2KMQ A;  5FUX A;  5HI7 A;  5E3P A; 
#chains in the Genus database with same CATH homology
 1BMO A;  5EX3 A;  1UVG A;  2V53 A;  2FNF X;  1TBQ R;  4L9M A;  3UGI A;  5EX0 A;  1TBN A;  2OVO A;  3RU0 A;  1SGN I;  2V1C A;  4OVO A;  1OMT A;  1IW4 A;  2LEO A;  2ORV A;  1IY6 A;  5FUW A;  1AN1 I;  1CGI I;  2W0T A;  3OL0 A;  1TGS I;  1XA6 A;  1UVF A;  1M8C A;  2DB6 A;  1CT0 I;  2GKT I;  3PDN A;  4UXI A;  5FUY A;  5JHW C;  4E1P A;  1IY5 A;  2SGD I;  2KMP A;  3UFF A;  1HJA I;  3SGB I;  1U5K A;  1PJU A;  2WCY A;  1N13 A;  3B4V C;  3OVO A;  1SGR I;  1R0R I;  4B6D A;  3CXL A;  1XBT A;  1OVO A;  1CSO I;  2F3C I;  2JZM A;  2JA1 A;  2KMR A;  2NU2 I;  2K9H A;  1PTR A;  5HQ8 A;  1SGP I;  1OYV I;  1BUS A;  3UGD A;  1Y1C A;  1HPT A;  1FAQ A;  1V1I A;  1CHO I;  2LUY A;  2YUU A;  3OXF A;  2SGE I;  1KBF A;  1TBO A;  2N71 A;  1KBE A;  2E5R A;  3D00 A;  1FYB A;  1LR8 A;  2J9R A;  2L7X A;  4UXH A;  3TJQ A;  4E1R A;  2L8E A;  4HGU A;  1W4R A;  3VE5 A;  2B8T A;  2VRW B;  3E59 A;  1VDD A;  2KMO A;  4GI3 C;  1HDL A;  1W3S A;  1CT2 I;  2ENZ A;  2SGQ I;  1XX6 A;  4UXJ A;  1UUC A;  2QQE A;  2ENN A;  2N52 A;  2ORW A;  2NU3 I;  2ARP F;  1NUB A;  1SGD I;  2DIP A;  4A24 A;  3GOX A;  3UEJ A;  2ERW A;  2GVI A;  5CCM A;  1H0Z A;  3E2I A;  2QQ0 A;  2M5X A;  2ROW A;  2JW6 A;  3BJI A;  2JYY A;  1TOT A;  2A20 A;  3UGL A;  1CE3 A;  2GKV A;  2E73 A;  1M8B A;  1TIH A;  1MT1 A;  3VDP A;  3OXL A;  1FAR A;  2BUS A;  2N1A B;  1PCE A;  3QWP A;  1CT4 I;  2NU1 I;  1Y1B A;  2SGP I;  2SGF I;  1R79 A;  1Y8F A;  2NU0 I;  2GKR I;  3SEK C;  3VDU A;  1YTP A;  1Z7K B;  1SGQ I;  3OXG A;  1CGJ I;  4FKD A;  1RFH A;  2QQD A;  3KY9 A;  1SGY I;  2KCX A;  2YQP A;  2WVJ A;  5DAE A;  2QPO A;  4JCV E;  2ODD A;  1YU6 C;  2N17 A;  1DS3 I;  1TUR A;  1PPF I;  1X74 A;  5FUV A;  1DS2 I;  1V1H A;  4SGB I;  1PTQ A;  1KMA A;  3MEK A;  1OMU A;  3QTL D;  1SGE I;  1LR9 A;  2CJS C;  2J87 A;  2QQC A;  2XRC A;  2V1C C;  1TUS A;  3HH2 C;  1TBR R;  2B0U C;  2NU4 I;  2ELI A;  2UZ3 A;  5CCL A;  3UEY A;  3SGQ I;  3FC3 A;  2OD1 A;  2JXD A;  2P6A C;  1LR7 A;  1X4S A;  2KMQ A;  5FUX A;  5HI7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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