1TBOA

Nmr structure of a protein kinase c-g phorbol-binding domain, 30 structures
Total Genus 8
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
66
structure length
66
Chain Sequence
QTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHTERR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Calcium-binding protein
molecule keywords PROTEIN KINASE C, GAMMA TYPE
publication title NMR structure of a protein kinase C-gamma phorbol-binding domain and study of protein-lipid micelle interactions.
pubmed doi rcsb
source organism Rattus rattus
total genus 8
structure length 66
sequence length 66
ec nomenclature ec 2.7.11.13: Protein kinase C.
pdb deposition date 1997-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00130 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1tboA00
1W4RA 1PTRA 2ELIA 2ORWA 1XX6A 3UGIA 1RFHA 2DB6A 5FUXA 4B6DA 4UXIA 3UEJA 1KBEA 2FNFX 2YUUA 1Y8FA 3UEYA 3UGDA 1R79A 2ROWA 5FUVA 2UZ3A 1PTQA 2ORVA 2E73A 4UXJA 2J9RA 5FUWA 2QPOA 2B8TA 3CXLA 4FKDA 1XBTA 2ENNA 2QQEA 2VRWB 2ENZA 4UXHA 1TBNA 3E2IA 4L9MA 3BJIA 1FAQA 2J87A 3UFFA 2QQ0A 2GVIA 3UGLA 1TBOA 5FUYA 1KBFA 3KY9A 2JA1A 2WVJA 1FARA 1XA6A
chains in the Genus database with same CATH superfamily
3OXGA 2ELIA 1VDDA 1PCEA 2GKVA 3R5DA 4DNCA 1RFHA 5FUXA 3OVOA 3TO6A 5CCMA 3GOXA 1OMUA 3QWPA 5CCLA 2FNFX 5E3PA 2GIVA 2YUUA 4WP4A 3OL0A 2V1CC 1AN1I 2CJSC 1BUSA 3UGDA 1CGII 1SGEI 1K7TA 2LUYA 5J8FA 1YU6C 1OMTA 1Z2IA 2E73A 2L7XA 1DS2I 1ULNA 2M5XA 1M8BA 1P9ZA 5FUWA 1V1IA 1XBTA 5E3QA 1CT2I 4UXHA 2ENZA 2ERWA 1LR8A 1MJAA 5J8CA 3VDUA 1HJAI 2SGQI 3OXLA 3E2IA 1XA6A 2NU1I 4L9MA 3BJIA 5JHWC 2J87A 3FC3A 1DS3I 1NUBA 5E3RA 2CWGA 2E5RA 2K9HA 3TOBA 1TBOA 1SGQI 1KBFA 2JA1A 1TUSA 1CSOI 2V53A 2WVJA 2QQ0A 1W4RA 2ORWA 3TO9A 2DB6A 1BMOA 1SGDI 3QAHA 2KCXA 2OU2A 3MEKA 4UXIA 2KMQA 3UEJA 4B6DA 1TBQR 2JYYA 1LR9A 1N13A 1UVFA 2W0TA 1TURA 1K7VA 2V1CA 5EX3A 1CE3A 2ROWA 1OYVI 5FUVA 1MJBA 1PTQA 2PQ8A 4SGBI 2WCYA 3TJQA 1LR7A 5HQ8A 1NXUA 2X3TA 2F3CI 2QPOA 2B8TA 2CWFA 2JW6A 1SGNI 3CXLA 4FKDA 3FSYA 2VRWB 2ODDA 2DKVA 4OVOA 1U5KA 1IY5A 2N17A 1HEVA 2NU2I 1PJUA 3FSXA 4E1PA 2UVOA 3TO7A 5EX0A 3QTLD 2GKTI 2SGEI 1XX6A 4A24A 1TIHA 1WTJA 1Y1CA 3SGQI 2XRCA 3R5BA 1SGPI 2RC4A 3E59A 1KBEA 2N1AB 5HI7A 1Y8FA 3HH2C 3UEYA 1R79A 2KMPA 2UZ3A 2SGFI 2ORVA 3TOAA 3RU0A 1IW4A 4GI3C 1PPFI 1MJ9A 2ENNA 1WGTA 1P9GA 2QQEA 1CT0I 1KMAA 1Q9BA 1YTPA 2YQPA 4MPIA 1CT4I 1UHAA 3UOEA 1FAQA 3UFFA 2KMOA 2OZUA 2SGPI 2N52A 1SGYI 3UGLA 4HGUA 5FUYA 2JXDA 2N71A 2P6AC 2L8EA 1PTRA 1H0ZA 2QQCA 1SGRI 3UGIA 1S20A 3D00A 2CWHA 1HPTA 1MT1A 2OVOA 2QQDA 3VDPA 3VE5A 2LEOA 5DAEA 2OD1A 1UVGA 2WGCA 1ULKA 1TBRR 2SGDI 4E1RA 2B0UC 2NU0I 2NU4I 1TGSI 2LB7A 2ARPF 1X74A 4UXJA 2J9RA 1UUCA 1FY7A 3R5AA 1Z7KB 2JZMA 2KMRA 2Y0MA 1WGCA 1CGJI 2GKRI 1TBNA 1FYBA 1K7UA 1Y1BA 7WGAA 1ULMA 1CHOI 2BUSA 1R0RI 2DIPA 3SEKC 1OVOA 3SGBI 1V1HA 9WGAA 1HDLA 3PDNA 1WKXA 2A20A 3B4VC 2GVIA 3OXFA 1IY6A 1TOTA 2RIJA 1M8CA 2X52A 3KY9A 1W3SA 3R5CA 4JCVE 4AMLA 1FARA 2NU3I 1X4SA
chains in the Genus database with same CATH topology
3OXGA 2ELIA 1VDDA 1PCEA 2GKVA 1RFHA 5FUXA 3OVOA 5CCMA 3GOXA 1OMUA 3QWPA 5CCLA 2FNFX 2YUUA 3OL0A 2V1CC 1AN1I 2CJSC 1BUSA 3UGDA 1CGII 1SGEI 2LUYA 1YU6C 1OMTA 2E73A 2L7XA 1DS2I 2M5XA 1M8BA 5FUWA 1V1IA 1XBTA 1CT2I 4UXHA 2ENZA 2ERWA 1LR8A 3VDUA 1HJAI 2SGQI 3OXLA 3E2IA 4L9MA 2NU1I 5JHWC 3BJIA 3FC3A 2J87A 1DS3I 1NUBA 2E5RA 2K9HA 1TBOA 1SGQI 1KBFA 2JA1A 1TUSA 1CSOI 2V53A 2WVJA 2QQ0A 1W4RA 2ORWA 2DB6A 1BMOA 1SGDI 2KCXA 3MEKA 4B6DA 4UXIA 2KMQA 3UEJA 1TBQR 2JYYA 1LR9A 1N13A 1UVFA 2W0TA 1TURA 2V1CA 5EX3A 1CE3A 2ROWA 1OYVI 5FUVA 1PTQA 4SGBI 2WCYA 3TJQA 1LR7A 5HQ8A 2F3CI 2QPOA 2B8TA 2JW6A 1SGNI 3CXLA 4FKDA 2VRWB 2ODDA 4OVOA 1U5KA 1IY5A 2N17A 2NU2I 1PJUA 4E1PA 5EX0A 3QTLD 2GKTI 2SGEI 1XX6A 4A24A 1TIHA 1Y1CA 3SGQI 2XRCA 1SGPI 3E59A 1KBEA 2N1AB 5HI7A 1Y8FA 3HH2C 3UEYA 1R79A 2KMPA 2UZ3A 2SGFI 2ORVA 3RU0A 1IW4A 4GI3C 1PPFI 2ENNA 2QQEA 1CT0I 1KMAA 1YTPA 2YQPA 1CT4I 1FAQA 3UFFA 2KMOA 2SGPI 2N52A 1SGYI 3UGLA 4HGUA 5FUYA 2JXDA 2N71A 2P6AC 2L8EA 1PTRA 1H0ZA 2QQCA 1SGRI 3UGIA 3D00A 1HPTA 1MT1A 2OVOA 2QQDA 3VDPA 3VE5A 2LEOA 5DAEA 2OD1A 1UVGA 1TBRR 2SGDI 4E1RA 2B0UC 2NU0I 1X4SA 2NU4I 1TGSI 2ARPF 1X74A 4UXJA 2J9RA 1UUCA 1Z7KB 2JZMA 2KMRA 1CGJI 2GKRI 1TBNA 1FYBA 1Y1BA 2DIPA 1CHOI 2BUSA 1R0RI 3SEKC 1HDLA 1OVOA 3SGBI 1V1HA 3PDNA 3B4VC 2A20A 3OXFA 2GVIA 1IY6A 1TOTA 1M8CA 3KY9A 1W3SA 4JCVE 1FARA 2NU3I 1XA6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1W4R A;  1PTR A;  2ELI A;  2ORW A;  1XX6 A;  3UGI A;  1RFH A;  2DB6 A;  5FUX A;  4B6D A;  4UXI A;  3UEJ A;  1KBE A;  2FNF X;  2YUU A;  1Y8F A;  3UEY A;  3UGD A;  1R79 A;  2ROW A;  5FUV A;  2UZ3 A;  1PTQ A;  2ORV A;  2E73 A;  4UXJ A;  2J9R A;  5FUW A;  2QPO A;  2B8T A;  3CXL A;  4FKD A;  1XBT A;  2ENN A;  2QQE A;  2VRW B;  2ENZ A;  4UXH A;  1TBN A;  3E2I A;  4L9M A;  3BJI A;  1FAQ A;  2J87 A;  3UFF A;  2QQ0 A;  2GVI A;  3UGL A;  1TBO A;  5FUY A;  1KBF A;  3KY9 A;  2JA1 A;  2WVJ A;  1FAR A;  1XA6 A; 
#chains in the Genus database with same CATH topology
 3OXG A;  2ELI A;  1VDD A;  1PCE A;  2GKV A;  3R5D A;  4DNC A;  1RFH A;  5FUX A;  3OVO A;  3TO6 A;  5CCM A;  3GOX A;  1OMU A;  3QWP A;  5CCL A;  2FNF X;  5E3P A;  2GIV A;  2YUU A;  4WP4 A;  3OL0 A;  2V1C C;  1AN1 I;  2CJS C;  1BUS A;  3UGD A;  1CGI I;  1SGE I;  1K7T A;  2LUY A;  5J8F A;  1YU6 C;  1OMT A;  1Z2I A;  2E73 A;  2L7X A;  1DS2 I;  1ULN A;  2M5X A;  1M8B A;  1P9Z A;  5FUW A;  1V1I A;  1XBT A;  5E3Q A;  1CT2 I;  4UXH A;  2ENZ A;  2ERW A;  1LR8 A;  1MJA A;  5J8C A;  3VDU A;  1HJA I;  2SGQ I;  3OXL A;  3E2I A;  1XA6 A;  2NU1 I;  4L9M A;  3BJI A;  5JHW C;  2J87 A;  3FC3 A;  1DS3 I;  1NUB A;  5E3R A;  2CWG A;  2E5R A;  2K9H A;  3TOB A;  1TBO A;  1SGQ I;  1KBF A;  2JA1 A;  1TUS A;  1CSO I;  2V53 A;  2WVJ A;  2QQ0 A;  1W4R A;  2ORW A;  3TO9 A;  2DB6 A;  1BMO A;  1SGD I;  3QAH A;  2KCX A;  2OU2 A;  3MEK A;  4UXI A;  2KMQ A;  3UEJ A;  4B6D A;  1TBQ R;  2JYY A;  1LR9 A;  1N13 A;  1UVF A;  2W0T A;  1TUR A;  1K7V A;  2V1C A;  5EX3 A;  1CE3 A;  2ROW A;  1OYV I;  5FUV A;  1MJB A;  1PTQ A;  2PQ8 A;  4SGB I;  2WCY A;  3TJQ A;  1LR7 A;  5HQ8 A;  1NXU A;  2X3T A;  2F3C I;  2QPO A;  2B8T A;  2CWF A;  2JW6 A;  1SGN I;  3CXL A;  4FKD A;  3FSY A;  2VRW B;  2ODD A;  2DKV A;  4OVO A;  1U5K A;  1IY5 A;  2N17 A;  1HEV A;  2NU2 I;  1PJU A;  3FSX A;  4E1P A;  2UVO A;  3TO7 A;  5EX0 A;  3QTL D;  2GKT I;  2SGE I;  1XX6 A;  4A24 A;  1TIH A;  1WTJ A;  1Y1C A;  3SGQ I;  2XRC A;  3R5B A;  1SGP I;  2RC4 A;  3E59 A;  1KBE A;  2N1A B;  5HI7 A;  1Y8F A;  3HH2 C;  3UEY A;  1R79 A;  2KMP A;  2UZ3 A;  2SGF I;  2ORV A;  3TOA A;  3RU0 A;  1IW4 A;  4GI3 C;  1PPF I;  1MJ9 A;  2ENN A;  1WGT A;  1P9G A;  2QQE A;  1CT0 I;  1KMA A;  1Q9B A;  1YTP A;  2YQP A;  4MPI A;  1CT4 I;  1UHA A;  3UOE A;  1FAQ A;  3UFF A;  2KMO A;  2OZU A;  2SGP I;  2N52 A;  1SGY I;  3UGL A;  4HGU A;  5FUY A;  2JXD A;  2N71 A;  2P6A C;  2L8E A;  1PTR A;  1H0Z A;  2QQC A;  1SGR I;  3UGI A;  1S20 A;  3D00 A;  2CWH A;  1HPT A;  1MT1 A;  2OVO A;  2QQD A;  3VDP A;  3VE5 A;  2LEO A;  5DAE A;  2OD1 A;  1UVG A;  2WGC A;  1ULK A;  1TBR R;  2SGD I;  4E1R A;  2B0U C;  2NU0 I;  2NU4 I;  1TGS I;  2LB7 A;  2ARP F;  1X74 A;  4UXJ A;  2J9R A;  1UUC A;  1FY7 A;  3R5A A;  1Z7K B;  2JZM A;  2KMR A;  2Y0M A;  1WGC A;  1CGJ I;  2GKR I;  1TBN A;  1FYB A;  1K7U A;  1Y1B A;  7WGA A;  1ULM A;  1CHO I;  2BUS A;  1R0R I;  2DIP A;  3SEK C;  1OVO A;  3SGB I;  1V1H A;  9WGA A;  1HDL A;  3PDN A;  1WKX A;  2A20 A;  3B4V C;  2GVI A;  3OXF A;  1IY6 A;  1TOT A;  2RIJ A;  1M8C A;  2X52 A;  3KY9 A;  1W3S A;  3R5C A;  4JCV E;  4AML A;  1FAR A;  2NU3 I;  1X4S A; 
#chains in the Genus database with same CATH homology
 3OXG A;  2ELI A;  1VDD A;  1PCE A;  2GKV A;  1RFH A;  5FUX A;  3OVO A;  5CCM A;  3GOX A;  1OMU A;  3QWP A;  5CCL A;  2FNF X;  2YUU A;  3OL0 A;  2V1C C;  1AN1 I;  2CJS C;  1BUS A;  3UGD A;  1CGI I;  1SGE I;  2LUY A;  1YU6 C;  1OMT A;  2E73 A;  2L7X A;  1DS2 I;  2M5X A;  1M8B A;  5FUW A;  1V1I A;  1XBT A;  1CT2 I;  4UXH A;  2ENZ A;  2ERW A;  1LR8 A;  3VDU A;  1HJA I;  2SGQ I;  3OXL A;  3E2I A;  4L9M A;  2NU1 I;  5JHW C;  3BJI A;  3FC3 A;  2J87 A;  1DS3 I;  1NUB A;  2E5R A;  2K9H A;  1TBO A;  1SGQ I;  1KBF A;  2JA1 A;  1TUS A;  1CSO I;  2V53 A;  2WVJ A;  2QQ0 A;  1W4R A;  2ORW A;  2DB6 A;  1BMO A;  1SGD I;  2KCX A;  3MEK A;  4B6D A;  4UXI A;  2KMQ A;  3UEJ A;  1TBQ R;  2JYY A;  1LR9 A;  1N13 A;  1UVF A;  2W0T A;  1TUR A;  2V1C A;  5EX3 A;  1CE3 A;  2ROW A;  1OYV I;  5FUV A;  1PTQ A;  4SGB I;  2WCY A;  3TJQ A;  1LR7 A;  5HQ8 A;  2F3C I;  2QPO A;  2B8T A;  2JW6 A;  1SGN I;  3CXL A;  4FKD A;  2VRW B;  2ODD A;  4OVO A;  1U5K A;  1IY5 A;  2N17 A;  2NU2 I;  1PJU A;  4E1P A;  5EX0 A;  3QTL D;  2GKT I;  2SGE I;  1XX6 A;  4A24 A;  1TIH A;  1Y1C A;  3SGQ I;  2XRC A;  1SGP I;  3E59 A;  1KBE A;  2N1A B;  5HI7 A;  1Y8F A;  3HH2 C;  3UEY A;  1R79 A;  2KMP A;  2UZ3 A;  2SGF I;  2ORV A;  3RU0 A;  1IW4 A;  4GI3 C;  1PPF I;  2ENN A;  2QQE A;  1CT0 I;  1KMA A;  1YTP A;  2YQP A;  1CT4 I;  1FAQ A;  3UFF A;  2KMO A;  2SGP I;  2N52 A;  1SGY I;  3UGL A;  4HGU A;  5FUY A;  2JXD A;  2N71 A;  2P6A C;  2L8E A;  1PTR A;  1H0Z A;  2QQC A;  1SGR I;  3UGI A;  3D00 A;  1HPT A;  1MT1 A;  2OVO A;  2QQD A;  3VDP A;  3VE5 A;  2LEO A;  5DAE A;  2OD1 A;  1UVG A;  1TBR R;  2SGD I;  4E1R A;  2B0U C;  2NU0 I;  1X4S A;  2NU4 I;  1TGS I;  2ARP F;  1X74 A;  4UXJ A;  2J9R A;  1UUC A;  1Z7K B;  2JZM A;  2KMR A;  1CGJ I;  2GKR I;  1TBN A;  1FYB A;  1Y1B A;  2DIP A;  1CHO I;  2BUS A;  1R0R I;  3SEK C;  1HDL A;  1OVO A;  3SGB I;  1V1H A;  3PDN A;  3B4V C;  2A20 A;  3OXF A;  2GVI A;  1IY6 A;  1TOT A;  1M8C A;  3KY9 A;  1W3S A;  4JCV E;  1FAR A;  2NU3 I;  1XA6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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