1U7VB

Crystal structure of the phosphorylated smad2/smad4 heterotrimeric complex
Total Genus 57
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
57
sequence length
236
structure length
208
Chain Sequence
ISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTMPIADPQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Signaling protein
molecule keywords Mothers against decapentaplegic homolog 2
publication title Structural basis of heteromeric smad protein assembly in tgf-Beta signaling
pubmed doi rcsb
source organism Homo sapiens
total genus 57
structure length 208
sequence length 236
ec nomenclature
pdb deposition date 2004-08-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF03166 MH2 MH2 domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.200.10 Mainly Beta Sandwich Tumour Suppressor Smad4 Tumour Suppressor Smad4 1u7vB00
1ZOQA 1MK2A 5BVIA 1U7VA 1DD1A 5C4VA 5JEOA 5JEJA 3DSHA 5JELA 1G88A 1YGSA 1DEVA 1U7FA 1U7VB 1J2FA 1MJSA 4R9PA 1KHXA 3GMJA 3DITA 5JEMA 1MR1A 5JEKA 1U7FB 1QWTA 1KHUA 5JERA 3A77A
chains in the Genus database with same CATH superfamily
1Z0UA 2QVLA 5EJGA 3V8NA 3VZDA 1ZOQA 1MK2A 4HAOA 1QU5A 3ELSA 3DSHA 1Y3IA 5JEJA 2I2CA 5DHRA 4EGXA 2KKLA 1YGSA 1DEVA 5DHSA 3UNMA 2P1RA 1G3GA 2I29A 2LC1A 2I2FA 3AFOA 2A0TA 2JQIA 3FM8A 1J4QA 1LGPA 4KU0D 4V24A 5DJOA 3HX1A 5A8IA 1KHUA 1Y3HA 3V8PA 3V8MA 4DY6A 2BONA 4D9VA 3V8RA 5EJFA 5JELA 1FHQA 1Z0ZA 1GXCA 1U0RA 5DHQA 3I6WA 1J4PA 3ELVA 1G88A 3HUEA 5DHTA 1U7FA 1U7VB 1U0TA 1J2FA 3I6UA 4WRRA 3T5PA 1DMZA 1K3QA 2JQLA 2I2DA 3VA1A 2JGRA 2W3OA 2AN1A 2I2AA 1UHTA 3GQSA 3OUNA 3V80A 5JEMA 3V7YA 4A4YA 2JPEA 2EH0A 1J4KA 2XXSA 3UOTA 4WERA 1MJSA 3A77A 2JQJA 4R9PA 3PFNA 2XT9B 1MZKA 2I2BA 5DHUA 3I0NA 4JIVD 2KB3A 5BVIA 3V7WA 1R21A 3PO8A 1SUWA 1YT5A 2FEZA 5E50A 5JEOA 5EJHA 3HUFA 2Q5FA 4QCJA 1J4OA 2I1WA 2AFFA 1KHXA 1Z0SA 5DHPA 3GMJA 1WV3A 3DITA 3UNNA 2CSWA 3KT9A 2FF4A 2PIEA 1LGQA 4H87A 1QWTA 4L02A 3VZBA 3VA4A 2JKDA 5EJIA 3UN0A 1YJMA 4EJQA 1UJXA 3UMZA 1K3NA 1WLNA 1DD1A 1J4LA 1U7VA 3V7UA 5C4VA 2G1LA 1YJ5C 2KFUA 3S40A 2KB4A 3I0MA 1G6GA 3POAA 3VZCA 3VPYA 2QV7A 4A0EA 4G2SA 1MR1A 3V8QA 5JEKA 4JONA 1K3JA 2BRFA 3MDBA 1U7FB 3UV0A 1K2MA 1K2NA 5JERA 4JIWD 1FHRA
chains in the Genus database with same CATH topology
2QVLA 3VZDA 1ZOQA 1MK2A 1QU5A 3ELSA 3DSHA 5JEJA 4EGXA 2KKLA 1YGSA 1DEVA 3UNMA 2P1RA 1G3GA 2LC1A 3FM8A 2A0TA 2JQIA 1J4QA 1LGPA 4KU0D 4V24A 5DJOA 3HX1A 5A8IA 1KHUA 2BONA 4D9VA 5JELA 1FHQA 1GXCA 3I6WA 1J4PA 3ELVA 1G88A 3HUEA 1U7FA 1U7VB 4WRRA 1J2FA 3I6UA 3T5PA 1DMZA 1K3QA 2JQLA 3VA1A 2JGRA 2W3OA 1UHTA 3GQSA 3OUNA 5JEMA 4A4YA 2JPEA 2EH0A 1J4KA 2XXSA 3UOTA 4WERA 3A77A 1MJSA 2JQJA 4R9PA 2XT9B 1MZKA 3I0NA 4JIVD 2KB3A 5BVIA 1R21A 3PO8A 2FEZA 5E50A 5JEOA 3HUFA 4QCJA 1J4OA 2AFFA 1KHXA 3GMJA 1WV3A 3DITA 3UNNA 2CSWA 3KT9A 2FF4A 2PIEA 1LGQA 4H87A 1QWTA 4L02A 3VZBA 3VA4A 2JKDA 3UN0A 1YJMA 4EJQA 1UJXA 3UMZA 1K3NA 1WLNA 1DD1A 1J4LA 1U7VA 5C4VA 2G1LA 1YJ5C 2KFUA 3S40A 2KB4A 3I0MA 1G6GA 3POAA 3VZCA 3VPYA 2QV7A 4A0EA 4G2SA 1MR1A 5JEKA 4JONA 1K3JA 2BRFA 3MDBA 1U7FB 3UV0A 1K2MA 1K2NA 5JERA 4JIWD 1FHRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ZOQ A;  1MK2 A;  5BVI A;  1U7V A;  1DD1 A;  5C4V A;  5JEO A;  5JEJ A;  3DSH A;  5JEL A;  1G88 A;  1YGS A;  1DEV A;  1U7F A;  1U7V B;  1J2F A;  1MJS A;  4R9P A;  1KHX A;  3GMJ A;  3DIT A;  5JEM A;  1MR1 A;  5JEK A;  1U7F B;  1QWT A;  1KHU A;  5JER A;  3A77 A; 
#chains in the Genus database with same CATH topology
 1Z0U A;  2QVL A;  5EJG A;  3V8N A;  3VZD A;  1ZOQ A;  1MK2 A;  4HAO A;  1QU5 A;  3ELS A;  3DSH A;  1Y3I A;  5JEJ A;  2I2C A;  5DHR A;  4EGX A;  2KKL A;  1YGS A;  1DEV A;  5DHS A;  3UNM A;  2P1R A;  1G3G A;  2I29 A;  2LC1 A;  2I2F A;  3AFO A;  2A0T A;  2JQI A;  3FM8 A;  1J4Q A;  1LGP A;  4KU0 D;  4V24 A;  5DJO A;  3HX1 A;  5A8I A;  1KHU A;  1Y3H A;  3V8P A;  3V8M A;  4DY6 A;  2BON A;  4D9V A;  3V8R A;  5EJF A;  5JEL A;  1FHQ A;  1Z0Z A;  1GXC A;  1U0R A;  5DHQ A;  3I6W A;  1J4P A;  3ELV A;  1G88 A;  3HUE A;  5DHT A;  1U7F A;  1U7V B;  1U0T A;  1J2F A;  3I6U A;  4WRR A;  3T5P A;  1DMZ A;  1K3Q A;  2JQL A;  2I2D A;  3VA1 A;  2JGR A;  2W3O A;  2AN1 A;  2I2A A;  1UHT A;  3GQS A;  3OUN A;  3V80 A;  5JEM A;  3V7Y A;  4A4Y A;  2JPE A;  2EH0 A;  1J4K A;  2XXS A;  3UOT A;  4WER A;  1MJS A;  3A77 A;  2JQJ A;  4R9P A;  3PFN A;  2XT9 B;  1MZK A;  2I2B A;  5DHU A;  3I0N A;  4JIV D;  2KB3 A;  5BVI A;  3V7W A;  1R21 A;  3PO8 A;  1SUW A;  1YT5 A;  2FEZ A;  5E50 A;  5JEO A;  5EJH A;  3HUF A;  2Q5F A;  4QCJ A;  1J4O A;  2I1W A;  2AFF A;  1KHX A;  1Z0S A;  5DHP A;  3GMJ A;  1WV3 A;  3DIT A;  3UNN A;  2CSW A;  3KT9 A;  2FF4 A;  2PIE A;  1LGQ A;  4H87 A;  1QWT A;  4L02 A;  3VZB A;  3VA4 A;  2JKD A;  5EJI A;  3UN0 A;  1YJM A;  4EJQ A;  1UJX A;  3UMZ A;  1K3N A;  1WLN A;  1DD1 A;  1J4L A;  1U7V A;  3V7U A;  5C4V A;  2G1L A;  1YJ5 C;  2KFU A;  3S40 A;  2KB4 A;  3I0M A;  1G6G A;  3POA A;  3VZC A;  3VPY A;  2QV7 A;  4A0E A;  4G2S A;  1MR1 A;  3V8Q A;  5JEK A;  4JON A;  1K3J A;  2BRF A;  3MDB A;  1U7F B;  3UV0 A;  1K2M A;  1K2N A;  5JER A;  4JIW D;  1FHR A; 
#chains in the Genus database with same CATH homology
 2QVL A;  3VZD A;  1ZOQ A;  1MK2 A;  1QU5 A;  3ELS A;  3DSH A;  5JEJ A;  4EGX A;  2KKL A;  1YGS A;  1DEV A;  3UNM A;  2P1R A;  1G3G A;  2LC1 A;  3FM8 A;  2A0T A;  2JQI A;  1J4Q A;  1LGP A;  4KU0 D;  4V24 A;  5DJO A;  3HX1 A;  5A8I A;  1KHU A;  2BON A;  4D9V A;  5JEL A;  1FHQ A;  1GXC A;  3I6W A;  1J4P A;  3ELV A;  1G88 A;  3HUE A;  1U7F A;  1U7V B;  4WRR A;  1J2F A;  3I6U A;  3T5P A;  1DMZ A;  1K3Q A;  2JQL A;  3VA1 A;  2JGR A;  2W3O A;  1UHT A;  3GQS A;  3OUN A;  5JEM A;  4A4Y A;  2JPE A;  2EH0 A;  1J4K A;  2XXS A;  3UOT A;  4WER A;  3A77 A;  1MJS A;  2JQJ A;  4R9P A;  2XT9 B;  1MZK A;  3I0N A;  4JIV D;  2KB3 A;  5BVI A;  1R21 A;  3PO8 A;  2FEZ A;  5E50 A;  5JEO A;  3HUF A;  4QCJ A;  1J4O A;  2AFF A;  1KHX A;  3GMJ A;  1WV3 A;  3DIT A;  3UNN A;  2CSW A;  3KT9 A;  2FF4 A;  2PIE A;  1LGQ A;  4H87 A;  1QWT A;  4L02 A;  3VZB A;  3VA4 A;  2JKD A;  3UN0 A;  1YJM A;  4EJQ A;  1UJX A;  3UMZ A;  1K3N A;  1WLN A;  1DD1 A;  1J4L A;  1U7V A;  5C4V A;  2G1L A;  1YJ5 C;  2KFU A;  3S40 A;  2KB4 A;  3I0M A;  1G6G A;  3POA A;  3VZC A;  3VPY A;  2QV7 A;  4A0E A;  4G2S A;  1MR1 A;  5JEK A;  4JON A;  1K3J A;  2BRF A;  3MDB A;  1U7F B;  3UV0 A;  1K2M A;  1K2N A;  5JER A;  4JIW D;  1FHR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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