1UF7A

Crystal structure of c171a/v236a mutant of n-carbamyl-d-amino acid amidohydrolase complexed with n-carbamyl-d-valine
Total Genus 103
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
103
sequence length
303
structure length
303
Chain Sequence
TRQMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLFEKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVDAAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKAGMEENCMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCRELREHIFNFKQHRQPQHYGLIAEL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords N-carbamyl-D-amino acid amidohydrolase
publication title Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase
rcsb
source organism Agrobacterium sp.
total genus 103
structure length 303
sequence length 303
chains with identical sequence B
ec nomenclature ec 3.5.1.77: N-carbamoyl-D-amino-acid hydrolase.
pdb deposition date 2003-05-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00795 CN_hydrolase Carbon-nitrogen hydrolase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.110.10 Alpha Beta 4-Layer Sandwich Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase Carbon-nitrogen hydrolase 1uf7A00
1UF4A 3DLAA 2DYVA 4CYFA 4F4HA 3KI8A 3IVZA 5H8LA 3IW3A 2VHIA 1EMSA 3SEQA 4IZWA 4IZTA 5H8KA 1ERZA 3N05A 2UXYA 4GYLA 4IZUA 2PLQA 3HKXA 2VHHA 3SYTA 1F89A 1J31A 4LF0A 1UF7A 2E2LA 4HG5A 3ILVA 4KZFA 4CYGA 3P8KA 4CYYA 3SEZA 4IZSA 5JQNA 4HGDA 5KHAA 5H8IA 4GYNA 4HG3A 2E11A 4IZVA 2E2KA 1UF8A 3KLCA 2W1VA 3SZGA 4H5UA 1FO6A 5H8JA 2GGLA 2GGKA 3SDBA 2DYUA 1UF5A 3WUYA
chains in the Genus database with same CATH superfamily
1UF4A 3DLAA 2DYVA 4CYFA 4F4HA 3KI8A 3IVZA 5H8LA 3IW3A 2VHIA 1EMSA 3SEQA 4IZWA 4IZTA 5H8KA 1ERZA 3N05A 2UXYA 4GYLA 4IZUA 2PLQA 3HKXA 2VHHA 3SYTA 1F89A 1J31A 4LF0A 1UF7A 2E2LA 4HG5A 3ILVA 4KZFA 4CYGA 3P8KA 4CYYA 3SEZA 4IZSA 5JQNA 4HGDA 5KHAA 5H8IA 4GYNA 4HG3A 2E11A 4IZVA 2E2KA 1UF8A 3KLCA 2W1VA 3SZGA 4H5UA 1FO6A 5H8JA 2GGLA 2GGKA 3SDBA 2DYUA 1UF5A 3WUYA
chains in the Genus database with same CATH topology
1UF4A 3DLAA 2DYVA 4CYFA 4F4HA 3KI8A 3IVZA 5H8LA 3IW3A 2VHIA 1EMSA 3SEQA 4IZWA 4IZTA 5H8KA 1ERZA 3N05A 2UXYA 4GYLA 4IZUA 2PLQA 3HKXA 2VHHA 3SYTA 1F89A 1J31A 4LF0A 1UF7A 2E2LA 4HG5A 3ILVA 4KZFA 4CYGA 3P8KA 4CYYA 3SEZA 4IZSA 5JQNA 4HGDA 5KHAA 5H8IA 4GYNA 4HG3A 2E11A 4IZVA 2E2KA 1UF8A 3KLCA 2W1VA 3SZGA 4H5UA 1FO6A 5H8JA 2GGLA 2GGKA 3SDBA 2DYUA 1UF5A 3WUYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1UF4 A;  3DLA A;  2DYV A;  4CYF A;  4F4H A;  3KI8 A;  3IVZ A;  5H8L A;  3IW3 A;  2VHI A;  1EMS A;  3SEQ A;  4IZW A;  4IZT A;  5H8K A;  1ERZ A;  3N05 A;  2UXY A;  4GYL A;  4IZU A;  2PLQ A;  3HKX A;  2VHH A;  3SYT A;  1F89 A;  1J31 A;  4LF0 A;  1UF7 A;  2E2L A;  4HG5 A;  3ILV A;  4KZF A;  4CYG A;  3P8K A;  4CYY A;  3SEZ A;  4IZS A;  5JQN A;  4HGD A;  5KHA A;  5H8I A;  4GYN A;  4HG3 A;  2E11 A;  4IZV A;  2E2K A;  1UF8 A;  3KLC A;  2W1V A;  3SZG A;  4H5U A;  1FO6 A;  5H8J A;  2GGL A;  2GGK A;  3SDB A;  2DYU A;  1UF5 A;  3WUY A; 
#chains in the Genus database with same CATH topology
 1UF4 A;  3DLA A;  2DYV A;  4CYF A;  4F4H A;  3KI8 A;  3IVZ A;  5H8L A;  3IW3 A;  2VHI A;  1EMS A;  3SEQ A;  4IZW A;  4IZT A;  5H8K A;  1ERZ A;  3N05 A;  2UXY A;  4GYL A;  4IZU A;  2PLQ A;  3HKX A;  2VHH A;  3SYT A;  1F89 A;  1J31 A;  4LF0 A;  1UF7 A;  2E2L A;  4HG5 A;  3ILV A;  4KZF A;  4CYG A;  3P8K A;  4CYY A;  3SEZ A;  4IZS A;  5JQN A;  4HGD A;  5KHA A;  5H8I A;  4GYN A;  4HG3 A;  2E11 A;  4IZV A;  2E2K A;  1UF8 A;  3KLC A;  2W1V A;  3SZG A;  4H5U A;  1FO6 A;  5H8J A;  2GGL A;  2GGK A;  3SDB A;  2DYU A;  1UF5 A;  3WUY A; 
#chains in the Genus database with same CATH homology
 1UF4 A;  3DLA A;  2DYV A;  4CYF A;  4F4H A;  3KI8 A;  3IVZ A;  5H8L A;  3IW3 A;  2VHI A;  1EMS A;  3SEQ A;  4IZW A;  4IZT A;  5H8K A;  1ERZ A;  3N05 A;  2UXY A;  4GYL A;  4IZU A;  2PLQ A;  3HKX A;  2VHH A;  3SYT A;  1F89 A;  1J31 A;  4LF0 A;  1UF7 A;  2E2L A;  4HG5 A;  3ILV A;  4KZF A;  4CYG A;  3P8K A;  4CYY A;  3SEZ A;  4IZS A;  5JQN A;  4HGD A;  5KHA A;  5H8I A;  4GYN A;  4HG3 A;  2E11 A;  4IZV A;  2E2K A;  1UF8 A;  3KLC A;  2W1V A;  3SZG A;  4H5U A;  1FO6 A;  5H8J A;  2GGL A;  2GGK A;  3SDB A;  2DYU A;  1UF5 A;  3WUY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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