1VKUA

Crystal structure of acyl carrier protein (tm0175) from thermotoga maritima at 2.00 a resolution
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
85
structure length
85
Chain Sequence
HHHMERKKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKLEEID
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
molecule keywords acyl carrier protein
publication title Crystal structure of Acyl carrier protein (TM0175) from Thermotoga maritima at 2.00 A resolution
rcsb
source organism Thermotoga maritima
total genus 27
structure length 85
sequence length 85
ec nomenclature
pdb deposition date 2004-06-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 1vkuA00
2GDYA 2N6YA 2KGDA 2PNGA 2FAEA 2XZ1C 2N5HA 2M5RA 4DG9A 5CZDB 1HQBA 2KG6A 1DV5A 2KOQA 1OR5A 2CG5B 2LMLA 4PWVB 1NQ4A 2QNWA 3GZLA 3GZMA 2JGPA 2MY5A 2LIUA 2FADA 2LL8A 4BPFA 2L22A 4R0MA 2XZ0D 2LOLA 2AFDA 2LIWA 2X2BA 4IZ6A 3EJDA 2KORA 2JU1A 2FQ1A 4BPGA 4NEOA 2CQ8A 2K0YA 3EJEA 2FHSC 2FVFA 2K94A 2MVVA 2CNRA 3NY7B 3CE7A 2EHTA 5HV8A 1T8KA 2ROQA 2LTEA 2JU2A 2LPKA 2KGCA 4H2WC 2KWLA 2EHSA 2JQ4A 2FQ0A 4H2YC 3EJBA 2K92A 4HKGA 2LKIA 4MRTC 2L4BA 2AF8A 2MVUA 3RG2A 2FACA 1L0HA 2N5IA 1L0IA 1KLPA 4PXHB 2KOPA 2CGQA 2GDXA 3LMOA 2GDWA 1VKUA 2MR7A 1F80D 2FVAA 2KGAA 1X3OA 4CA3A 2MD9A 5HVCA 1AF8A 2L9FA 1HY8A 4BPHA 4H2XC 2KG9A 2KG8A 2AFEA 2MF4A 5EJDA 2N50A 5KP6B 1ACPA 2K2QA 2VSQA 2L0QA 2K0XA 2N6ZA 2N98A 2FQ2A 1DNYA 2K93A 2KW2A 2KR5A 2MR8A 5KP8B 2KOOA 2AVAA 2DNWA 2FVEA 2KOSA 5KP7B 2KGEA
chains in the Genus database with same CATH superfamily
2N6YA 2FAEA 2XZ1C 3H4EA 1VQ4P 2VLOA 2M8LA 2CG5B 3G71P 2EFJA 2QNWA 1BXIA 2XXMA 2MY5A 2LIUA 2OTLP 4BPFA 1M74A 4R0MA 1Q7YQ 5I4TG 1W2BO 3CCRP 2Z46A 4XFXA 3DPHA 2JO0A 3G1GA 5EW5E 1EIAA 4PH1A 1T8KA 1M90Q 3CCSP 2LTEA 1K8AQ 3CCVP 2KWLA 2JQ4A 4GR2A 3CCLP 4H2YC 1YJNP 5DCKA 1D1DA 3DS1A 2L4BA 3RG2A 4PXHB 2JAZA 2KOPA 1QVGO 4GR6A 2GDWA 3G28A 4M0IA 3CCMP 1F80D 1K73Q 3CC2P 1CEIA 2MD9A 5HVCA 3H0DA 3NTEA 2KG8A 2AFEA 3CCEP 2QA4P 1BAJA 2VSQA 2NO8A 1JJ2O 5BS2A 5JPAA 4XRQA 2CWOA 5HGOA 2KR5A 3G29A 4U0AA 2VLQA 2AVAA 3CC4P 2KOSA 2KGDA 2GZJA 3VRLC 1VQ7P 2M5RA 1A8OA 2ONTA 1HQBA 2KG6A 2M8NA 4XROA 2JYLA 2VLNA 1NJIQ 4QKOA 3GZMA 3GJNA 1KD1Q 1GXGA 2LL8A 3G0VA 2XZ0D 1E6JP 2LOLA 4COPA 3B5IA 2AFDA 2X2BA 2GZEA 1M6EX 2FQ1A 2PY8A 3G6EP 3EJEA 5HGMA 3I56P 2MVVA 2CNRA 3NY7B 3CE7A 1VQ9P 2ROQA 1FR2A 2LPKA 2GZIA 1N8RQ 1YI2P 1IUQA 3CXCO 1VQ8P 3EJBA 3CPWO 2AF8A 2FACA 1L0HA 1KLPA 1VKUA 3MGEA 1X3OA 1Z6MA 1E0HA 1YHQP 1HY8A 2L9FA 1RO2A 3G26A 2XV6A 1K30A 1A43A 5KP6B 2KODA 4U0CA 2JBGA 3CMAP 2L0QA 3U43A 5HGNA 2PEIA 2KW2A 1YJ9P 3DS0A 2PEJA 5KP8B 3I55P 5F2OA 4U0DA 2PNGA 2N5HA 3CMEP 4WYMA 2JB0A 1VQMP 2E1MA 2K0DX 2Z44A 2XT1A 1OR5A 2DGYA 3GKLC 2QEXP 1VQ5P 2LMLA 1NQ4A 3GZLA 2JGPA 3DS5A 1GPJA 1RNIA 1UJZA 1M1KQ 1AYIA 1EMVA 3DS3A 4UHPB 3CC7P 4F37A 1KC8Q 2KORA 4NEOA 2CQ8A 2K0YA 2FHSC 2FVFA 3E2DA 1IMQA 1EOQA 1K9MQ 3CCQP 3B4QA 2EHTA 3G1IA 3HZQA 5F2KA 2KGCA 2GZFA 2PEMA 1Q86Q 3CD6P 2P9XA 2FQ0A 3Q20A 2LKIA 1IMPA 4MRTC 2ERHA 4U0BA 5BS1A 2MVUA 3M1MA 1L0IA 3G21A 1YITP 2CGQA 2GDXA 5HGLA 2BUOA 4QNBA 2FVAA 1KQSO 1VQOP 2KG9A 4PH0A 2N50A 3CCJP 1ACPA 2K2QA 2PEQA 1Q81Q 2K0XA 2N6ZA 3DS4A 2FQ2A 2BHVA 1VQLP 1M6NA 4COCA 2MR8A 2EIAA 2PEKA 3LRYA 2DNWA 2FVEA 3DS2A 2KGEA 2GDYA 2EG5A 2PENA 4DG9A 5CZDB 1ZMBA 2VLPA 1DV5A 2KOQA 1YIJP 2PEOA 2GZGA 4PWVB 3H47A 7CEIA 2Z45A 3G4SP 3CCUP 2FADA 2L6EA 2L22A 4U0EA 3WBHA 3RG6C 1QVFO 2LIWA 4IZ6A 3EJDA 1S72P 2JU1A 2GYKA 1VQ6P 4BPGA 4XFZA 2K94A 1Q82Q 5HV8A 2JU2A 4XFYA 4U0FA 2K5XA 4H2WC 2JYGA 2EHSA 1AUMA 3DTJA 1VHNA 2K92A 4HKGA 1VQKP 1RO0A 1VQPP 2M8PA 2N5IA 3LMOA 2OARA 2MR7A 2KGAA 2WPTA 4CA3A 1AF8A 1GXHA 4BPHA 4H2XC 3OW2O 1UNKA 2MF4A 5EJDA 4IPYA 3P05A 2LF4A 1YJWP 1QRJA 2N98A 5F2NA 3HYBA 2K93A 1DNYA 2OTJP 1MZ8A 2KOOA 1VQNP 1ZNVA 5KP7B
chains in the Genus database with same CATH topology
2GDYA 2N6YA 2KGDA 2PNGA 2FAEA 2XZ1C 2N5HA 2M5RA 4DG9A 5CZDB 1HQBA 2KG6A 1DV5A 2KOQA 1OR5A 2CG5B 2LMLA 4PWVB 1NQ4A 2QNWA 3GZLA 3GZMA 2JGPA 2MY5A 2LIUA 2FADA 2LL8A 4BPFA 2L22A 4R0MA 2XZ0D 2LOLA 2AFDA 2LIWA 2X2BA 4IZ6A 3EJDA 2KORA 2JU1A 2FQ1A 4BPGA 4NEOA 2CQ8A 2K0YA 3EJEA 2FHSC 2FVFA 2K94A 2MVVA 2CNRA 3NY7B 3CE7A 2EHTA 5HV8A 1T8KA 2ROQA 2LTEA 2JU2A 2LPKA 2KGCA 4H2WC 2KWLA 2EHSA 2JQ4A 2FQ0A 4H2YC 3EJBA 2K92A 4HKGA 2LKIA 4MRTC 2L4BA 2AF8A 2MVUA 3RG2A 2FACA 1L0HA 2N5IA 1L0IA 1KLPA 4PXHB 2KOPA 2CGQA 2GDXA 3LMOA 2GDWA 1VKUA 2MR7A 1F80D 2FVAA 2KGAA 1X3OA 4CA3A 2MD9A 5HVCA 1AF8A 2L9FA 1HY8A 4BPHA 4H2XC 2KG9A 2KG8A 2AFEA 2MF4A 5EJDA 2N50A 5KP6B 1ACPA 2K2QA 2VSQA 2L0QA 2K0XA 2N6ZA 2N98A 2FQ2A 1DNYA 2K93A 2KW2A 2KR5A 2MR8A 5KP8B 2KOOA 2AVAA 2DNWA 2FVEA 2KOSA 5KP7B 2KGEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GDY A;  2N6Y A;  2KGD A;  2PNG A;  2FAE A;  2XZ1 C;  2N5H A;  2M5R A;  4DG9 A;  5CZD B;  1HQB A;  2KG6 A;  1DV5 A;  2KOQ A;  1OR5 A;  2CG5 B;  2LML A;  4PWV B;  1NQ4 A;  2QNW A;  3GZL A;  3GZM A;  2JGP A;  2MY5 A;  2LIU A;  2FAD A;  2LL8 A;  4BPF A;  2L22 A;  4R0M A;  2XZ0 D;  2LOL A;  2AFD A;  2LIW A;  2X2B A;  4IZ6 A;  3EJD A;  2KOR A;  2JU1 A;  2FQ1 A;  4BPG A;  4NEO A;  2CQ8 A;  2K0Y A;  3EJE A;  2FHS C;  2FVF A;  2K94 A;  2MVV A;  2CNR A;  3NY7 B;  3CE7 A;  2EHT A;  5HV8 A;  1T8K A;  2ROQ A;  2LTE A;  2JU2 A;  2LPK A;  2KGC A;  4H2W C;  2KWL A;  2EHS A;  2JQ4 A;  2FQ0 A;  4H2Y C;  3EJB A;  2K92 A;  4HKG A;  2LKI A;  4MRT C;  2L4B A;  2AF8 A;  2MVU A;  3RG2 A;  2FAC A;  1L0H A;  2N5I A;  1L0I A;  1KLP A;  4PXH B;  2KOP A;  2CGQ A;  2GDX A;  3LMO A;  2GDW A;  1VKU A;  2MR7 A;  1F80 D;  2FVA A;  2KGA A;  1X3O A;  4CA3 A;  2MD9 A;  5HVC A;  1AF8 A;  2L9F A;  1HY8 A;  4BPH A;  4H2X C;  2KG9 A;  2KG8 A;  2AFE A;  2MF4 A;  5EJD A;  2N50 A;  5KP6 B;  1ACP A;  2K2Q A;  2VSQ A;  2L0Q A;  2K0X A;  2N6Z A;  2N98 A;  2FQ2 A;  1DNY A;  2K93 A;  2KW2 A;  2KR5 A;  2MR8 A;  5KP8 B;  2KOO A;  2AVA A;  2DNW A;  2FVE A;  2KOS A;  5KP7 B;  2KGE A; 
#chains in the Genus database with same CATH topology
 2N6Y A;  2FAE A;  2XZ1 C;  3H4E A;  1VQ4 P;  2VLO A;  2M8L A;  2CG5 B;  3G71 P;  2EFJ A;  2QNW A;  1BXI A;  2XXM A;  2MY5 A;  2LIU A;  2OTL P;  4BPF A;  1M74 A;  4R0M A;  1Q7Y Q;  5I4T G;  1W2B O;  3CCR P;  2Z46 A;  4XFX A;  3DPH A;  2JO0 A;  3G1G A;  5EW5 E;  1EIA A;  4PH1 A;  1T8K A;  1M90 Q;  3CCS P;  2LTE A;  1K8A Q;  3CCV P;  2KWL A;  2JQ4 A;  4GR2 A;  3CCL P;  4H2Y C;  1YJN P;  5DCK A;  1D1D A;  3DS1 A;  2L4B A;  3RG2 A;  4PXH B;  2JAZ A;  2KOP A;  1QVG O;  4GR6 A;  2GDW A;  3G28 A;  4M0I A;  3CCM P;  1F80 D;  1K73 Q;  3CC2 P;  1CEI A;  2MD9 A;  5HVC A;  3H0D A;  3NTE A;  2KG8 A;  2AFE A;  3CCE P;  2QA4 P;  1BAJ A;  2VSQ A;  2NO8 A;  1JJ2 O;  5BS2 A;  5JPA A;  4XRQ A;  2CWO A;  5HGO A;  2KR5 A;  3G29 A;  4U0A A;  2VLQ A;  2AVA A;  3CC4 P;  2KOS A;  2KGD A;  2GZJ A;  3VRL C;  1VQ7 P;  2M5R A;  1A8O A;  2ONT A;  1HQB A;  2KG6 A;  2M8N A;  4XRO A;  2JYL A;  2VLN A;  1NJI Q;  4QKO A;  3GZM A;  3GJN A;  1KD1 Q;  1GXG A;  2LL8 A;  3G0V A;  2XZ0 D;  1E6J P;  2LOL A;  4COP A;  3B5I A;  2AFD A;  2X2B A;  2GZE A;  1M6E X;  2FQ1 A;  2PY8 A;  3G6E P;  3EJE A;  5HGM A;  3I56 P;  2MVV A;  2CNR A;  3NY7 B;  3CE7 A;  1VQ9 P;  2ROQ A;  1FR2 A;  2LPK A;  2GZI A;  1N8R Q;  1YI2 P;  1IUQ A;  3CXC O;  1VQ8 P;  3EJB A;  3CPW O;  2AF8 A;  2FAC A;  1L0H A;  1KLP A;  1VKU A;  3MGE A;  1X3O A;  1Z6M A;  1E0H A;  1YHQ P;  1HY8 A;  2L9F A;  1RO2 A;  3G26 A;  2XV6 A;  1K30 A;  1A43 A;  5KP6 B;  2KOD A;  4U0C A;  2JBG A;  3CMA P;  2L0Q A;  3U43 A;  5HGN A;  2PEI A;  2KW2 A;  1YJ9 P;  3DS0 A;  2PEJ A;  5KP8 B;  3I55 P;  5F2O A;  4U0D A;  2PNG A;  2N5H A;  3CME P;  4WYM A;  2JB0 A;  1VQM P;  2E1M A;  2K0D X;  2Z44 A;  2XT1 A;  1OR5 A;  2DGY A;  3GKL C;  2QEX P;  1VQ5 P;  2LML A;  1NQ4 A;  3GZL A;  2JGP A;  3DS5 A;  1GPJ A;  1RNI A;  1UJZ A;  1M1K Q;  1AYI A;  1EMV A;  3DS3 A;  4UHP B;  3CC7 P;  4F37 A;  1KC8 Q;  2KOR A;  4NEO A;  2CQ8 A;  2K0Y A;  2FHS C;  2FVF A;  3E2D A;  1IMQ A;  1EOQ A;  1K9M Q;  3CCQ P;  3B4Q A;  2EHT A;  3G1I A;  3HZQ A;  5F2K A;  2KGC A;  2GZF A;  2PEM A;  1Q86 Q;  3CD6 P;  2P9X A;  2FQ0 A;  3Q20 A;  2LKI A;  1IMP A;  4MRT C;  2ERH A;  4U0B A;  5BS1 A;  2MVU A;  3M1M A;  1L0I A;  3G21 A;  1YIT P;  2CGQ A;  2GDX A;  5HGL A;  2BUO A;  4QNB A;  2FVA A;  1KQS O;  1VQO P;  2KG9 A;  4PH0 A;  2N50 A;  3CCJ P;  1ACP A;  2K2Q A;  2PEQ A;  1Q81 Q;  2K0X A;  2N6Z A;  3DS4 A;  2FQ2 A;  2BHV A;  1VQL P;  1M6N A;  4COC A;  2MR8 A;  2EIA A;  2PEK A;  3LRY A;  2DNW A;  2FVE A;  3DS2 A;  2KGE A;  2GDY A;  2EG5 A;  2PEN A;  4DG9 A;  5CZD B;  1ZMB A;  2VLP A;  1DV5 A;  2KOQ A;  1YIJ P;  2PEO A;  2GZG A;  4PWV B;  3H47 A;  7CEI A;  2Z45 A;  3G4S P;  3CCU P;  2FAD A;  2L6E A;  2L22 A;  4U0E A;  3WBH A;  3RG6 C;  1QVF O;  2LIW A;  4IZ6 A;  3EJD A;  1S72 P;  2JU1 A;  2GYK A;  1VQ6 P;  4BPG A;  4XFZ A;  2K94 A;  1Q82 Q;  5HV8 A;  2JU2 A;  4XFY A;  4U0F A;  2K5X A;  4H2W C;  2JYG A;  2EHS A;  1AUM A;  3DTJ A;  1VHN A;  2K92 A;  4HKG A;  1VQK P;  1RO0 A;  1VQP P;  2M8P A;  2N5I A;  3LMO A;  2OAR A;  2MR7 A;  2KGA A;  2WPT A;  4CA3 A;  1AF8 A;  1GXH A;  4BPH A;  4H2X C;  3OW2 O;  1UNK A;  2MF4 A;  5EJD A;  4IPY A;  3P05 A;  2LF4 A;  1YJW P;  1QRJ A;  2N98 A;  5F2N A;  3HYB A;  2K93 A;  1DNY A;  2OTJ P;  1MZ8 A;  2KOO A;  1VQN P;  1ZNV A;  5KP7 B; 
#chains in the Genus database with same CATH homology
 2GDY A;  2N6Y A;  2KGD A;  2PNG A;  2FAE A;  2XZ1 C;  2N5H A;  2M5R A;  4DG9 A;  5CZD B;  1HQB A;  2KG6 A;  1DV5 A;  2KOQ A;  1OR5 A;  2CG5 B;  2LML A;  4PWV B;  1NQ4 A;  2QNW A;  3GZL A;  3GZM A;  2JGP A;  2MY5 A;  2LIU A;  2FAD A;  2LL8 A;  4BPF A;  2L22 A;  4R0M A;  2XZ0 D;  2LOL A;  2AFD A;  2LIW A;  2X2B A;  4IZ6 A;  3EJD A;  2KOR A;  2JU1 A;  2FQ1 A;  4BPG A;  4NEO A;  2CQ8 A;  2K0Y A;  3EJE A;  2FHS C;  2FVF A;  2K94 A;  2MVV A;  2CNR A;  3NY7 B;  3CE7 A;  2EHT A;  5HV8 A;  1T8K A;  2ROQ A;  2LTE A;  2JU2 A;  2LPK A;  2KGC A;  4H2W C;  2KWL A;  2EHS A;  2JQ4 A;  2FQ0 A;  4H2Y C;  3EJB A;  2K92 A;  4HKG A;  2LKI A;  4MRT C;  2L4B A;  2AF8 A;  2MVU A;  3RG2 A;  2FAC A;  1L0H A;  2N5I A;  1L0I A;  1KLP A;  4PXH B;  2KOP A;  2CGQ A;  2GDX A;  3LMO A;  2GDW A;  1VKU A;  2MR7 A;  1F80 D;  2FVA A;  2KGA A;  1X3O A;  4CA3 A;  2MD9 A;  5HVC A;  1AF8 A;  2L9F A;  1HY8 A;  4BPH A;  4H2X C;  2KG9 A;  2KG8 A;  2AFE A;  2MF4 A;  5EJD A;  2N50 A;  5KP6 B;  1ACP A;  2K2Q A;  2VSQ A;  2L0Q A;  2K0X A;  2N6Z A;  2N98 A;  2FQ2 A;  1DNY A;  2K93 A;  2KW2 A;  2KR5 A;  2MR8 A;  5KP8 B;  2KOO A;  2AVA A;  2DNW A;  2FVE A;  2KOS A;  5KP7 B;  2KGE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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