1Y1WC

Complete rna polymerase ii elongation complex
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription,transferase/dna-rna hybrid
molecule keywords 5'-D(P*AP*GP*TP*AP*CP*TP*TP*AP*CP*GP*CP*CP*TP*GP*GP*TP*CP*AP
publication title Complete RNA Polymerase II Elongation Complex Structure and Its Interactions with NTP and TFIIS
pubmed doi rcsb
total genus 42
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2004-11-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1y1wC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1y1wC01
2PMZD 2WAQD 5IYBK 3S1MK 5M5WK 4MEYA 2JA8C 1I6VA 2JA8K 4LLGA 5C4XK 4BY7K 5IP9K 4QIWD 2YU9C 5C44C 5IYDC 4BXXC 5C44K 4A3JK 2BE5A 2NVXK 4Q4ZA 2PMZL 2WAQL 2R93K 4YFNA 4NOIA 2E2JC 3S14C 1XPPA 2E2JK 3S16C 3S14K 3HOUC 2R92K 4C3HC 4YFXA 3HOWC 5FJ8K 2PA8D 3S1NC 4C3HK 3HOUK 4XSZA 5D4DA 3HOWK 2E2HC 1YNJA 4QIWL 3GTKK 3GTOC 2VUMC 3S1QC 4A3DC 3RZOC 3S1QK 2JA5K 4A3DK 3HKZD 3K7AC 3RZOK 3S17C 2B63C 4A3EC 3S2HC 4A3GK 2PA8L 1I6HC 4C2MK 2A69A 4Y52K 4A3KC 5IP7C 4KMUA 3EQLA 5IYCC 4A93C 5IP7K 4MEXA 3HKZL 1SFOC 1TWGC 4OIPA 4YFKA 1TWHC 2A68A 3CQZC 3DXJA 1SFOK 2NVYC 3PO2C 1TWHK 3HOYC 3CQZK 2R7ZC 2NVYK 2YU9K 1Y1VC 3HOYK 3PO2K 3PO3K 4BXXK 3H3VD 4C3JC 5M5YK 1TWCC 4KN4A 1TWCK 3S1NK 4OIRA 4A3BC 1TWAC 1ZYRA 2E2HK 1TWAK 2Y0SL 4A3BK 2NVTC 5FLMK 3FKIC 1R9TC 1IW7A 2NVTK 3GTOK 1R9TK 4Q5SA 4XSXA 3GTGC 2VUMK 1K83C 3H3VL 3GTGK 3I4NC 2A6HA 3S1RC 3S2DC 3I4NK 4Y52C 4XLNA 3GTKC 3K7AK 1SMYA 4LK0A 4QJVB 4QJVA 4A3EK 3GTPC 4BBRC 4OIQA 3HOVC 2B63K 3GTPK 4A3FC 3GTQC 3HOVK 3S2HK 2O5JA 4A3FK 3GTQK 1I6HK 4A3IC 4A3IK 4A3KK 4GZYA 2O5IA 5IYCK 4A93K 4A3CC 3S17K 5IYDK 2Y0SD 1TWGK 4LJZA 1BDFA 4AYBD 4A3MC 4G7HA 5M5XK 4A3MK 4C3IC 4ZH4A 2R7ZK 1Y1VK 4C3IK 2JA6C 3M3YC 3HOXC 4G7ZA 3GTLC 4C3JK 5M3MK 5M3FK 3M3YK 4MQ9A 5TMCA 4G7OA 2E2IC 4Y7NC 4A3LC 1Y1WC 3GTMC 2E2IK 1Y1WK 4OIOA 1I3QC 5FLMC 1TWFC 2WB1D 2JA7C 1I3QK 3GTJC 3FKIK 4AYBL 1YNNA 4YG2A 4BY1C 4X6AC 2JA7K 4BY1K 4X6AK 5IYBC 3I4MC 1HQMA 3WODA 3S1MC 1K83K 3I4MK 3S1RK 3S2DK 5C3EC 5C4XC 4KN7A 4BY7C 5C3EK 5IP9C 4BBRK 2WB1L 4A3JC 5C4JC 2NVXC 2PPBA 4OINA 3HOZC 5C4JK 2R93C 3HOZK 3M4OC 1WCMC 3M4OK 3PO3C 2NVQC 4A3GC 2R92C 1WCMK 4A3CK 2NVQK 4BBSK 3RZDC 3RZDK 2A6EA 4XLPA 2JA6K 5TMFA 3HOXK 3S16K 3GTLK 4JK1A 3H0GC 4LK1A 2JA5C 3S15C 3H0GK 4Y7NK 4A3LK 3S15K 3GTMK 1I50C 2CW0A 1I50K 4BBSC 1TWFK 3GTJK 4C2MC
chains in the Genus database with same CATH superfamily
1J6VA 1IS1A 3GTQA 5IP9K 2EBBA 2YU9C 4BXXC 2NVXK 4Q4ZA 1SFOA 3LAJA 2WAQL 4NOIA 1F93A 4KB4A 5D4DA 1ZBSA 4LOWA 3N0BA 5DM7S 2VUMC 3S1QC 3S1QK 2JA5K 3HKZD 3S17C 2PA8L 1G51A 1K83A 3GTKA 1O25A 2JH3A 3GTPA 5IYCC 3N0CA 4G0VA 4OIPA 4BKWA 1TWHC 3CQZC 4G0UA 4DDQA 1TWHK 3CQZK 1Y1VC 1WQFA 3PIPS 3H3VD 3TTGA 3S1NK 3MMLB 2E2HK 2V6TA 3FKIC 1IW7A 3T02A 3GTMA 4Q5SA 1XZPA 3S2DC 1XXCA 3K7AK 4LK0A 2XCRB 3HOVC 3N3YA 1VJEA 4A3FC 3GTQC 1XXAA 4AH6A 2O5JA 4A3FK 3GTQK 3HOVK 1I6HK 4C45A 1C0AA 3GEHA 4GZYA 4A3CC 1BS2A 1O2AA 3A8IA 4FZBA 4G7ZA 4LQYA 4FM9A 5M3MK 4WILA 4Y7NC 1TWFC 2WB1D 4AYBL 1WQHA 1YNNA 4YG2A 2ZUEA 3S1MC 1JOEA 1K83K 3HXAA 5C4XC 5IOTA 1EFWA 4BBRK 3BUEA 2ZFZA 4A3JC 5C4JC 4OINA 3HOZC 4KM8A 5C4JK 3HOZK 3M4OC 1XXBA 2YU9A 1WSVA 3M4OK 3DLLS 1PJ7A 3RZDC 1DCPA 1RU0A 3RZDK 3T00A 5L46A 3HOXK 2Y3PA 4JK1A 4LK1A 3AH5A 3GTMK 2VUMA 2CW0A 4BBSC 5FLMK 3GTGA 4BBSK 2FQTA 2WAQD 2XCQA 1ZXOA 1O26A 3LAPA 4BY7K 1PJ6A 4PABA 5C44C 1IL2A 5IYDC 5C44K 1F7VA 2PMZL 3GSIA 1J6XA 1PJ5A 4LR2A 4U67S 3S14C 4GTEA 3S14K 3HOUC 1Y1VA 1V5VA 2PA8D 3HOUK 5HL8A 2L3UA 4QIWL 3FHZA 3OEPA 2E2IA 1Y1WA 3RZOC 1I3QA 3FKIA 3RZOK 2B63C 4A3EC 3S2HC 2GAGC 3SZZA 1O27A 2A69A 3AD9C 4A3KC 4WF9S 3TFHA 1O28A 1EH1A 4KAWX 2ZUFA 3EQLA 4A93C 1J98A 1KQ4A 1TWGC 4KARA 1VH2A 2V6SA 2YU9K 4KMHA 4BXXK 2R7ZC 5M5YK 4C3JC 2L5NA 1TWCC 4KN4A 1TWCK 4WFBS 4OIRA 4A3BC 1WQGA 4GTLA 4A3BK 1EK8A 2V6UA 2NVTC 2GSNA 4P9SA 2NVTK 3GTGC 1XZPB 3FOEA 2VUMK 1TWFA 3GTGK 1VGXA 1SMYA 3S17K 1AB4A 1WORA 3LPXA 1ZVUA 1O29A 5IYCK 2Y0SD 1BDFA 4AYBD 4A3MC 1HI9A 4A3MK 4GFQA 5EGEA 1Y1VK 3GTLC 4G0WA 5TMCA 3IPJA 4G7OA 2E2IC 1Y1WC 2E2IK 1Y1WK 1USOA 1I3QC 1YX2A 4WJ4A 1I3QK 3FKIK 3ERED 5IYBC 1HQMA 1F9NA 4GTDA 1WIHA 3S2DK 1ISEA 5C3EC 5JVOA 5C3EK 5E68A 1UV7A 2PPBA 2R93C 4WFAS 2KWAA 3PO3C 4A3GC 3T01A 2R92C 4A3CK 2GAHC 4GTBA 4IO9S 5TMFA 1TWAA 1O24A 5HL7S 1ZQ1C 4Y7NK 5IORA 1TWFK 1B4BA 4C2MC 2PMZD 1DCHA 1VRQC 2B63A 3S1MK 5M5WK 2JA8C 1GE9A 2RH6A 1I6VA 3AD7C 4LLGA 2JA8K 2KPUA 3A8KA 5C4XK 4QIWD 1WOPA 4O2DA 4A3JK 2BE5A 1TWGA 2E2JC 2E2JK 2R7ZA 4C3HC 4YFXA 1DCOA 4C3HK 4XSZA 1IQ0A 1O2BA 1TWCA 3GDZA 3GTOC 4P5AA 3L4KA 4WJ3M 3LYWA 3PIOS 4KMUA 4IOCS 4YFKA 2A68A 4KASA 5IYDK 1WCMA 1BJTA 2CFAA 3GEIA 3TFIA 3GEEA 5JVGS 3BP8C 1TWAC 1ZYRA 3TFJA 1TWAK 3GTLA 1R9TC 3H0GA 1R9TK 3S1RC 5EGHA 4XLNA 1IBAA 2B63K 4QJVA 4A3EK 3S2HK 4OIQA 2P8TA 4A3IC 1FEUA 4A3IK 4A3KK 5HQHA 2O5IA 4A93K 1TWGK 2ZJQS 3NUHA 2R93A 4G7HA 4C3IC 2R7ZK 2R92A 4C3IK 4J3NA 2JA6C 4C3JK 3FOFA 4A3LC 3CF5S 2P5MA 3AD8C 3GTJC 3AQPA 5IP9C 4BLBA 4GTFA 4KM9A 4KMDA 2NVXC 5CJ9A 1WCMC 2KXYA 1BGWA 1WCMK 2NVQC 2NVYA 2NVQK 4KMAA 1EQRA 2A6EA 3JSTA 5IOSA 3GTLK 1DD5A 3H0GC 2JA5C 3S15C 3H0GK 3GTOA 3S15K 1B4AA 1I50C 3V4GA 1XZQA 1I50K 4GTCA 3G4AA 4GT9A 5IYBK 3Q3QA 4MEYA 3AQOA 3S0XA 1INNA 4ILDA 2R93K 4YFNA 1XPPA 3PO3K 3S16C 4A3GK 2R92K 3HOWC 4KATA 3S16K 5FJ8K 3S1NC 3HOWK 1USMA 2E2HC 1YNJA 3CAGA 2D6FC 2KQ1A 4A3DC 4KB2A 4A3DK 4KDDA 1R9TA 3K7AC 2JA7A 4BLAA 1I6HC 4C2MK 1JVIA 1IE0A 1WOOA 5IP7C 5IP7K 4MEXA 3A8JA 4PAAA 4RMFA 3HKZL 1SFOC 4XCHA 5JVHS 3DXJA 1SFOK 1J6WA 2NVYC 3PO2C 3BP3A 3HOYC 1WOSA 1WSRA 2CFAB 2NVYK 4M1XA 2RGRA 3HOYK 1L0WA 3PO2K 5DM6S 3ADAC 5IOQA 1X31C 2JA6A 2ZJPS 2Y0SL 2PHCB 3GTOK 4XSXA 2ZJRS 1K83C 3H3VL 3I4NC 5JFEA 2A6HA 3GTJA 3I4NK 4Y52C 3GTKC 4QJVB 4Y52K 3GTKK 3GTPC 4BBRC 2FQOA 1F7UA 3GTPK 2XCOA 1JQWA 1O2FB 2NVXA 4LJZA 3G4CA 5M5XK 4ZH4A 3GIRA 3SZYA 3L4JA 2GSOA 3M3YC 3HOXC 3M3YK 5M3FK 4WFNS 4MQ9A 3GTMC 4OIOA 4GTAA 5FLMC 2JA7C 2JA7K 2JA5A 4BY1C 4X6AC 4BY1K 4X6AK 2GSUA 3I4MC 1I50A 3WODA 3I4MK 3S1RK 3VA7A 4KN7A 4BY7C 1YCLA 3OREA 2WB1L 2W7VA 1TWHA 3CQZA 5TJ3A 4KC6A 1VLOA 3OPFA 4XLPA 2JA6K 2E2HA 4P5BA 4IOAS 5CHPA 4A3LK 1XZQB 4WCES 1EI6A 3GTJK 3QX3A
chains in the Genus database with same CATH topology
2PMZD 2WAQD 5IYBK 3S1MK 5M5WK 4MEYA 2JA8C 1I6VA 2JA8K 4LLGA 5C4XK 4BY7K 5IP9K 4QIWD 2YU9C 5C44C 5IYDC 4BXXC 5C44K 4A3JK 2BE5A 2NVXK 4Q4ZA 2PMZL 2WAQL 2R93K 4YFNA 4NOIA 2E2JC 3S14C 1XPPA 2E2JK 3S16C 3S14K 3HOUC 2R92K 4C3HC 4YFXA 3HOWC 5FJ8K 2PA8D 3S1NC 4C3HK 3HOUK 4XSZA 5D4DA 3HOWK 2E2HC 1YNJA 4QIWL 3GTKK 3GTOC 2VUMC 3S1QC 4A3DC 3RZOC 3S1QK 2JA5K 4A3DK 3HKZD 3K7AC 3RZOK 3S17C 2B63C 4A3EC 3S2HC 4A3GK 2PA8L 1I6HC 4C2MK 2A69A 4Y52K 4A3KC 5IP7C 4KMUA 3EQLA 5IYCC 4A93C 5IP7K 4MEXA 3HKZL 1SFOC 1TWGC 4OIPA 4YFKA 1TWHC 2A68A 3CQZC 3DXJA 1SFOK 2NVYC 3PO2C 1TWHK 3HOYC 3CQZK 2R7ZC 2NVYK 2YU9K 1Y1VC 3HOYK 3PO2K 3PO3K 4BXXK 3H3VD 4C3JC 5M5YK 1TWCC 4KN4A 1TWCK 3S1NK 4OIRA 4A3BC 1TWAC 1ZYRA 2E2HK 1TWAK 2Y0SL 4A3BK 2NVTC 5FLMK 3FKIC 1R9TC 1IW7A 2NVTK 3GTOK 1R9TK 4Q5SA 4XSXA 3GTGC 2VUMK 1K83C 3H3VL 3GTGK 3I4NC 2A6HA 3S1RC 3S2DC 3I4NK 4Y52C 4XLNA 3GTKC 3K7AK 1SMYA 4LK0A 4QJVB 4QJVA 4A3EK 3GTPC 4BBRC 4OIQA 3HOVC 2B63K 3GTPK 4A3FC 3GTQC 3HOVK 3S2HK 2O5JA 4A3FK 3GTQK 1I6HK 4A3IC 4A3IK 4A3KK 4GZYA 2O5IA 5IYCK 4A93K 4A3CC 3S17K 5IYDK 2Y0SD 1TWGK 4LJZA 1BDFA 4AYBD 4A3MC 4G7HA 5M5XK 4A3MK 4C3IC 4ZH4A 2R7ZK 1Y1VK 4C3IK 2JA6C 3M3YC 3HOXC 4G7ZA 3GTLC 4C3JK 5M3MK 5M3FK 3M3YK 4MQ9A 5TMCA 4G7OA 2E2IC 4Y7NC 4A3LC 1Y1WC 3GTMC 2E2IK 1Y1WK 4OIOA 1I3QC 5FLMC 1TWFC 2WB1D 2JA7C 1I3QK 3GTJC 3FKIK 4AYBL 1YNNA 4YG2A 4BY1C 4X6AC 2JA7K 4BY1K 4X6AK 5IYBC 3I4MC 1HQMA 3WODA 3S1MC 1K83K 3I4MK 3S1RK 3S2DK 5C3EC 5C4XC 4KN7A 4BY7C 5C3EK 5IP9C 4BBRK 2WB1L 4A3JC 5C4JC 2NVXC 2PPBA 4OINA 3HOZC 5C4JK 2R93C 3HOZK 3M4OC 1WCMC 3M4OK 3PO3C 2NVQC 4A3GC 2R92C 1WCMK 4A3CK 2NVQK 4BBSK 3RZDC 3RZDK 2A6EA 4XLPA 2JA6K 5TMFA 3HOXK 3S16K 3GTLK 4JK1A 3H0GC 4LK1A 2JA5C 3S15C 3H0GK 4Y7NK 4A3LK 3S15K 3GTMK 1I50C 2CW0A 1I50K 4BBSC 1TWFK 3GTJK 4C2MC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PMZ D;  2WAQ D;  5IYB K;  3S1M K;  5M5W K;  4MEY A;  2JA8 C;  1I6V A;  2JA8 K;  4LLG A;  5C4X K;  4BY7 K;  5IP9 K;  4QIW D;  2YU9 C;  5C44 C;  5IYD C;  4BXX C;  5C44 K;  4A3J K;  2BE5 A;  2NVX K;  4Q4Z A;  2PMZ L;  2WAQ L;  2R93 K;  4YFN A;  4NOI A;  2E2J C;  3S14 C;  1XPP A;  2E2J K;  3S16 C;  3S14 K;  3HOU C;  2R92 K;  4C3H C;  4YFX A;  3HOW C;  5FJ8 K;  2PA8 D;  3S1N C;  4C3H K;  3HOU K;  4XSZ A;  5D4D A;  3HOW K;  2E2H C;  1YNJ A;  4QIW L;  3GTK K;  3GTO C;  2VUM C;  3S1Q C;  4A3D C;  3RZO C;  3S1Q K;  2JA5 K;  4A3D K;  3HKZ D;  3K7A C;  3RZO K;  3S17 C;  2B63 C;  4A3E C;  3S2H C;  4A3G K;  2PA8 L;  1I6H C;  4C2M K;  2A69 A;  4Y52 K;  4A3K C;  5IP7 C;  4KMU A;  3EQL A;  5IYC C;  4A93 C;  5IP7 K;  4MEX A;  3HKZ L;  1SFO C;  1TWG C;  4OIP A;  4YFK A;  1TWH C;  2A68 A;  3CQZ C;  3DXJ A;  1SFO K;  2NVY C;  3PO2 C;  1TWH K;  3HOY C;  3CQZ K;  2R7Z C;  2NVY K;  2YU9 K;  1Y1V C;  3HOY K;  3PO2 K;  3PO3 K;  4BXX K;  3H3V D;  4C3J C;  5M5Y K;  1TWC C;  4KN4 A;  1TWC K;  3S1N K;  4OIR A;  4A3B C;  1TWA C;  1ZYR A;  2E2H K;  1TWA K;  2Y0S L;  4A3B K;  2NVT C;  5FLM K;  3FKI C;  1R9T C;  1IW7 A;  2NVT K;  3GTO K;  1R9T K;  4Q5S A;  4XSX A;  3GTG C;  2VUM K;  1K83 C;  3H3V L;  3GTG K;  3I4N C;  2A6H A;  3S1R C;  3S2D C;  3I4N K;  4Y52 C;  4XLN A;  3GTK C;  3K7A K;  1SMY A;  4LK0 A;  4QJV B;  4QJV A;  4A3E K;  3GTP C;  4BBR C;  4OIQ A;  3HOV C;  2B63 K;  3GTP K;  4A3F C;  3GTQ C;  3HOV K;  3S2H K;  2O5J A;  4A3F K;  3GTQ K;  1I6H K;  4A3I C;  4A3I K;  4A3K K;  4GZY A;  2O5I A;  5IYC K;  4A93 K;  4A3C C;  3S17 K;  5IYD K;  2Y0S D;  1TWG K;  4LJZ A;  1BDF A;  4AYB D;  4A3M C;  4G7H A;  5M5X K;  4A3M K;  4C3I C;  4ZH4 A;  2R7Z K;  1Y1V K;  4C3I K;  2JA6 C;  3M3Y C;  3HOX C;  4G7Z A;  3GTL C;  4C3J K;  5M3M K;  5M3F K;  3M3Y K;  4MQ9 A;  5TMC A;  4G7O A;  2E2I C;  4Y7N C;  4A3L C;  1Y1W C;  3GTM C;  2E2I K;  1Y1W K;  4OIO A;  1I3Q C;  5FLM C;  1TWF C;  2WB1 D;  2JA7 C;  1I3Q K;  3GTJ C;  3FKI K;  4AYB L;  1YNN A;  4YG2 A;  4BY1 C;  4X6A C;  2JA7 K;  4BY1 K;  4X6A K;  5IYB C;  3I4M C;  1HQM A;  3WOD A;  3S1M C;  1K83 K;  3I4M K;  3S1R K;  3S2D K;  5C3E C;  5C4X C;  4KN7 A;  4BY7 C;  5C3E K;  5IP9 C;  4BBR K;  2WB1 L;  4A3J C;  5C4J C;  2NVX C;  2PPB A;  4OIN A;  3HOZ C;  5C4J K;  2R93 C;  3HOZ K;  3M4O C;  1WCM C;  3M4O K;  3PO3 C;  2NVQ C;  4A3G C;  2R92 C;  1WCM K;  4A3C K;  2NVQ K;  4BBS K;  3RZD C;  3RZD K;  2A6E A;  4XLP A;  2JA6 K;  5TMF A;  3HOX K;  3S16 K;  3GTL K;  4JK1 A;  3H0G C;  4LK1 A;  2JA5 C;  3S15 C;  3H0G K;  4Y7N K;  4A3L K;  3S15 K;  3GTM K;  1I50 C;  2CW0 A;  1I50 K;  4BBS C;  1TWF K;  3GTJ K;  4C2M C; 
#chains in the Genus database with same CATH topology
 1J6V A;  1IS1 A;  3GTQ A;  5IP9 K;  2EBB A;  2YU9 C;  4BXX C;  2NVX K;  4Q4Z A;  1SFO A;  3LAJ A;  2WAQ L;  4NOI A;  1F93 A;  4KB4 A;  5D4D A;  1ZBS A;  4LOW A;  3N0B A;  5DM7 S;  2VUM C;  3S1Q C;  3S1Q K;  2JA5 K;  3HKZ D;  3S17 C;  2PA8 L;  1G51 A;  1K83 A;  3GTK A;  1O25 A;  2JH3 A;  3GTP A;  5IYC C;  3N0C A;  4G0V A;  4OIP A;  4BKW A;  1TWH C;  3CQZ C;  4G0U A;  4DDQ A;  1TWH K;  3CQZ K;  1Y1V C;  1WQF A;  3PIP S;  3H3V D;  3TTG A;  3S1N K;  3MML B;  2E2H K;  2V6T A;  3FKI C;  1IW7 A;  3T02 A;  3GTM A;  4Q5S A;  1XZP A;  3S2D C;  1XXC A;  3K7A K;  4LK0 A;  2XCR B;  3HOV C;  3N3Y A;  1VJE A;  4A3F C;  3GTQ C;  1XXA A;  4AH6 A;  2O5J A;  4A3F K;  3GTQ K;  3HOV K;  1I6H K;  4C45 A;  1C0A A;  3GEH A;  4GZY A;  4A3C C;  1BS2 A;  1O2A A;  3A8I A;  4FZB A;  4G7Z A;  4LQY A;  4FM9 A;  5M3M K;  4WIL A;  4Y7N C;  1TWF C;  2WB1 D;  4AYB L;  1WQH A;  1YNN A;  4YG2 A;  2ZUE A;  3S1M C;  1JOE A;  1K83 K;  3HXA A;  5C4X C;  5IOT A;  1EFW A;  4BBR K;  3BUE A;  2ZFZ A;  4A3J C;  5C4J C;  4OIN A;  3HOZ C;  4KM8 A;  5C4J K;  3HOZ K;  3M4O C;  1XXB A;  2YU9 A;  1WSV A;  3M4O K;  3DLL S;  1PJ7 A;  3RZD C;  1DCP A;  1RU0 A;  3RZD K;  3T00 A;  5L46 A;  3HOX K;  2Y3P A;  4JK1 A;  4LK1 A;  3AH5 A;  3GTM K;  2VUM A;  2CW0 A;  4BBS C;  5FLM K;  3GTG A;  4BBS K;  2FQT A;  2WAQ D;  2XCQ A;  1ZXO A;  1O26 A;  3LAP A;  4BY7 K;  1PJ6 A;  4PAB A;  5C44 C;  1IL2 A;  5IYD C;  5C44 K;  1F7V A;  2PMZ L;  3GSI A;  1J6X A;  1PJ5 A;  4LR2 A;  4U67 S;  3S14 C;  4GTE A;  3S14 K;  3HOU C;  1Y1V A;  1V5V A;  2PA8 D;  3HOU K;  5HL8 A;  2L3U A;  4QIW L;  3FHZ A;  3OEP A;  2E2I A;  1Y1W A;  3RZO C;  1I3Q A;  3FKI A;  3RZO K;  2B63 C;  4A3E C;  3S2H C;  2GAG C;  3SZZ A;  1O27 A;  2A69 A;  3AD9 C;  4A3K C;  4WF9 S;  3TFH A;  1O28 A;  1EH1 A;  4KAW X;  2ZUF A;  3EQL A;  4A93 C;  1J98 A;  1KQ4 A;  1TWG C;  4KAR A;  1VH2 A;  2V6S A;  2YU9 K;  4KMH A;  4BXX K;  2R7Z C;  5M5Y K;  4C3J C;  2L5N A;  1TWC C;  4KN4 A;  1TWC K;  4WFB S;  4OIR A;  4A3B C;  1WQG A;  4GTL A;  4A3B K;  1EK8 A;  2V6U A;  2NVT C;  2GSN A;  4P9S A;  2NVT K;  3GTG C;  1XZP B;  3FOE A;  2VUM K;  1TWF A;  3GTG K;  1VGX A;  1SMY A;  3S17 K;  1AB4 A;  1WOR A;  3LPX A;  1ZVU A;  1O29 A;  5IYC K;  2Y0S D;  1BDF A;  4AYB D;  4A3M C;  1HI9 A;  4A3M K;  4GFQ A;  5EGE A;  1Y1V K;  3GTL C;  4G0W A;  5TMC A;  3IPJ A;  4G7O A;  2E2I C;  1Y1W C;  2E2I K;  1Y1W K;  1USO A;  1I3Q C;  1YX2 A;  4WJ4 A;  1I3Q K;  3FKI K;  3ERE D;  5IYB C;  1HQM A;  1F9N A;  4GTD A;  1WIH A;  3S2D K;  1ISE A;  5C3E C;  5JVO A;  5C3E K;  5E68 A;  1UV7 A;  2PPB A;  2R93 C;  4WFA S;  2KWA A;  3PO3 C;  4A3G C;  3T01 A;  2R92 C;  4A3C K;  2GAH C;  4GTB A;  4IO9 S;  5TMF A;  1TWA A;  1O24 A;  5HL7 S;  1ZQ1 C;  4Y7N K;  5IOR A;  1TWF K;  1B4B A;  4C2M C;  2PMZ D;  1DCH A;  1VRQ C;  2B63 A;  3S1M K;  5M5W K;  2JA8 C;  1GE9 A;  2RH6 A;  1I6V A;  3AD7 C;  4LLG A;  2JA8 K;  2KPU A;  3A8K A;  5C4X K;  4QIW D;  1WOP A;  4O2D A;  4A3J K;  2BE5 A;  1TWG A;  2E2J C;  2E2J K;  2R7Z A;  4C3H C;  4YFX A;  1DCO A;  4C3H K;  4XSZ A;  1IQ0 A;  1O2B A;  1TWC A;  3GDZ A;  3GTO C;  4P5A A;  3L4K A;  4WJ3 M;  3LYW A;  3PIO S;  4KMU A;  4IOC S;  4YFK A;  2A68 A;  4KAS A;  5IYD K;  1WCM A;  1BJT A;  2CFA A;  3GEI A;  3TFI A;  3GEE A;  5JVG S;  3BP8 C;  1TWA C;  1ZYR A;  3TFJ A;  1TWA K;  3GTL A;  1R9T C;  3H0G A;  1R9T K;  3S1R C;  5EGH A;  4XLN A;  1IBA A;  2B63 K;  4QJV A;  4A3E K;  3S2H K;  4OIQ A;  2P8T A;  4A3I C;  1FEU A;  4A3I K;  4A3K K;  5HQH A;  2O5I A;  4A93 K;  1TWG K;  2ZJQ S;  3NUH A;  2R93 A;  4G7H A;  4C3I C;  2R7Z K;  2R92 A;  4C3I K;  4J3N A;  2JA6 C;  4C3J K;  3FOF A;  4A3L C;  3CF5 S;  2P5M A;  3AD8 C;  3GTJ C;  3AQP A;  5IP9 C;  4BLB A;  4GTF A;  4KM9 A;  4KMD A;  2NVX C;  5CJ9 A;  1WCM C;  2KXY A;  1BGW A;  1WCM K;  2NVQ C;  2NVY A;  2NVQ K;  4KMA A;  1EQR A;  2A6E A;  3JST A;  5IOS A;  3GTL K;  1DD5 A;  3H0G C;  2JA5 C;  3S15 C;  3H0G K;  3GTO A;  3S15 K;  1B4A A;  1I50 C;  3V4G A;  1XZQ A;  1I50 K;  4GTC A;  3G4A A;  4GT9 A;  5IYB K;  3Q3Q A;  4MEY A;  3AQO A;  3S0X A;  1INN A;  4ILD A;  2R93 K;  4YFN A;  1XPP A;  3PO3 K;  3S16 C;  4A3G K;  2R92 K;  3HOW C;  4KAT A;  3S16 K;  5FJ8 K;  3S1N C;  3HOW K;  1USM A;  2E2H C;  1YNJ A;  3CAG A;  2D6F C;  2KQ1 A;  4A3D C;  4KB2 A;  4A3D K;  4KDD A;  1R9T A;  3K7A C;  2JA7 A;  4BLA A;  1I6H C;  4C2M K;  1JVI A;  1IE0 A;  1WOO A;  5IP7 C;  5IP7 K;  4MEX A;  3A8J A;  4PAA A;  4RMF A;  3HKZ L;  1SFO C;  4XCH A;  5JVH S;  3DXJ A;  1SFO K;  1J6W A;  2NVY C;  3PO2 C;  3BP3 A;  3HOY C;  1WOS A;  1WSR A;  2CFA B;  2NVY K;  4M1X A;  2RGR A;  3HOY K;  1L0W A;  3PO2 K;  5DM6 S;  3ADA C;  5IOQ A;  1X31 C;  2JA6 A;  2ZJP S;  2Y0S L;  2PHC B;  3GTO K;  4XSX A;  2ZJR S;  1K83 C;  3H3V L;  3I4N C;  5JFE A;  2A6H A;  3GTJ A;  3I4N K;  4Y52 C;  3GTK C;  4QJV B;  4Y52 K;  3GTK K;  3GTP C;  4BBR C;  2FQO A;  1F7U A;  3GTP K;  2XCO A;  1JQW A;  1O2F B;  2NVX A;  4LJZ A;  3G4C A;  5M5X K;  4ZH4 A;  3GIR A;  3SZY A;  3L4J A;  2GSO A;  3M3Y C;  3HOX C;  3M3Y K;  5M3F K;  4WFN S;  4MQ9 A;  3GTM C;  4OIO A;  4GTA A;  5FLM C;  2JA7 C;  2JA7 K;  2JA5 A;  4BY1 C;  4X6A C;  4BY1 K;  4X6A K;  2GSU A;  3I4M C;  1I50 A;  3WOD A;  3I4M K;  3S1R K;  3VA7 A;  4KN7 A;  4BY7 C;  1YCL A;  3ORE A;  2WB1 L;  2W7V A;  1TWH A;  3CQZ A;  5TJ3 A;  4KC6 A;  1VLO A;  3OPF A;  4XLP A;  2JA6 K;  2E2H A;  4P5B A;  4IOA S;  5CHP A;  4A3L K;  1XZQ B;  4WCE S;  1EI6 A;  3GTJ K;  3QX3 A; 
#chains in the Genus database with same CATH homology
 2PMZ D;  2WAQ D;  5IYB K;  3S1M K;  5M5W K;  4MEY A;  2JA8 C;  1I6V A;  2JA8 K;  4LLG A;  5C4X K;  4BY7 K;  5IP9 K;  4QIW D;  2YU9 C;  5C44 C;  5IYD C;  4BXX C;  5C44 K;  4A3J K;  2BE5 A;  2NVX K;  4Q4Z A;  2PMZ L;  2WAQ L;  2R93 K;  4YFN A;  4NOI A;  2E2J C;  3S14 C;  1XPP A;  2E2J K;  3S16 C;  3S14 K;  3HOU C;  2R92 K;  4C3H C;  4YFX A;  3HOW C;  5FJ8 K;  2PA8 D;  3S1N C;  4C3H K;  3HOU K;  4XSZ A;  5D4D A;  3HOW K;  2E2H C;  1YNJ A;  4QIW L;  3GTK K;  3GTO C;  2VUM C;  3S1Q C;  4A3D C;  3RZO C;  3S1Q K;  2JA5 K;  4A3D K;  3HKZ D;  3K7A C;  3RZO K;  3S17 C;  2B63 C;  4A3E C;  3S2H C;  4A3G K;  2PA8 L;  1I6H C;  4C2M K;  2A69 A;  4Y52 K;  4A3K C;  5IP7 C;  4KMU A;  3EQL A;  5IYC C;  4A93 C;  5IP7 K;  4MEX A;  3HKZ L;  1SFO C;  1TWG C;  4OIP A;  4YFK A;  1TWH C;  2A68 A;  3CQZ C;  3DXJ A;  1SFO K;  2NVY C;  3PO2 C;  1TWH K;  3HOY C;  3CQZ K;  2R7Z C;  2NVY K;  2YU9 K;  1Y1V C;  3HOY K;  3PO2 K;  3PO3 K;  4BXX K;  3H3V D;  4C3J C;  5M5Y K;  1TWC C;  4KN4 A;  1TWC K;  3S1N K;  4OIR A;  4A3B C;  1TWA C;  1ZYR A;  2E2H K;  1TWA K;  2Y0S L;  4A3B K;  2NVT C;  5FLM K;  3FKI C;  1R9T C;  1IW7 A;  2NVT K;  3GTO K;  1R9T K;  4Q5S A;  4XSX A;  3GTG C;  2VUM K;  1K83 C;  3H3V L;  3GTG K;  3I4N C;  2A6H A;  3S1R C;  3S2D C;  3I4N K;  4Y52 C;  4XLN A;  3GTK C;  3K7A K;  1SMY A;  4LK0 A;  4QJV B;  4QJV A;  4A3E K;  3GTP C;  4BBR C;  4OIQ A;  3HOV C;  2B63 K;  3GTP K;  4A3F C;  3GTQ C;  3HOV K;  3S2H K;  2O5J A;  4A3F K;  3GTQ K;  1I6H K;  4A3I C;  4A3I K;  4A3K K;  4GZY A;  2O5I A;  5IYC K;  4A93 K;  4A3C C;  3S17 K;  5IYD K;  2Y0S D;  1TWG K;  4LJZ A;  1BDF A;  4AYB D;  4A3M C;  4G7H A;  5M5X K;  4A3M K;  4C3I C;  4ZH4 A;  2R7Z K;  1Y1V K;  4C3I K;  2JA6 C;  3M3Y C;  3HOX C;  4G7Z A;  3GTL C;  4C3J K;  5M3M K;  5M3F K;  3M3Y K;  4MQ9 A;  5TMC A;  4G7O A;  2E2I C;  4Y7N C;  4A3L C;  1Y1W C;  3GTM C;  2E2I K;  1Y1W K;  4OIO A;  1I3Q C;  5FLM C;  1TWF C;  2WB1 D;  2JA7 C;  1I3Q K;  3GTJ C;  3FKI K;  4AYB L;  1YNN A;  4YG2 A;  4BY1 C;  4X6A C;  2JA7 K;  4BY1 K;  4X6A K;  5IYB C;  3I4M C;  1HQM A;  3WOD A;  3S1M C;  1K83 K;  3I4M K;  3S1R K;  3S2D K;  5C3E C;  5C4X C;  4KN7 A;  4BY7 C;  5C3E K;  5IP9 C;  4BBR K;  2WB1 L;  4A3J C;  5C4J C;  2NVX C;  2PPB A;  4OIN A;  3HOZ C;  5C4J K;  2R93 C;  3HOZ K;  3M4O C;  1WCM C;  3M4O K;  3PO3 C;  2NVQ C;  4A3G C;  2R92 C;  1WCM K;  4A3C K;  2NVQ K;  4BBS K;  3RZD C;  3RZD K;  2A6E A;  4XLP A;  2JA6 K;  5TMF A;  3HOX K;  3S16 K;  3GTL K;  4JK1 A;  3H0G C;  4LK1 A;  2JA5 C;  3S15 C;  3H0G K;  4Y7N K;  4A3L K;  3S15 K;  3GTM K;  1I50 C;  2CW0 A;  1I50 K;  4BBS C;  1TWF K;  3GTJ K;  4C2M C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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