1YU6C

Crystal structure of the subtilisin carlsberg:omtky3 complex
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Subtilisin Carlsberg
publication title Structure of the subtilisin Carlsberg-OMTKY3 complex reveals two different ovomucoid conformations.
pubmed doi rcsb
source organism Meleagris gallopavo
total genus 12
structure length 51
sequence length 51
chains with identical sequence D
ec nomenclature
pdb deposition date 2005-02-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
C PF07648 Kazal_2 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1yu6C00
1HJAI 4HGUA 1OVOA 2SGQI 2QQDA 2ERWA 1IY6A 2GKTI 1CT2I 1HPTA 2JXDA 1IY5A 1PJUA 1LR8A 1Y1CA 3OVOA 1M8BA 2BUSA 2NU2I 1UVFA 1OMTA 1TBQR 1TIHA 2KMOA 1Z7KB 4GI3C 2M5XA 2SGEI 1CE3A 2N17A 2NU3I 2SGPI 1IW4A 1H0ZA 2NU0I 1TBRR 3SGQI 1R0RI 1BMOA 1LR7A 2N71A 2NU4I 2SGDI 1N13A 1KMAA 3SGBI 1AN1I 2P6AC 3SEKC 3HH2C 2KCXA 1BUSA 1SGYI 2F3CI 1CHOI 1OMUA 1CT4I 1SGRI 2JZMA 2KMPA 1TURA 2WCYA 1MT1A 1PPFI 1CT0I 1SGQI 1OYVI 1SGDI 1FYBA 2V53A 1YTPA 2QQCA 1CGJI 1NUBA 2KMQA 2KMRA 1UVGA 3TJQA 4SGBI 1HDLA 1DS3I 2NU1I 5DAEA 1M8CA 2OVOA 1CGII 1UUCA 1CSOI 1DS2I 4OVOA 3B4VC 2SGFI 2LEOA 2ARPF 1LR9A 2XRCA 2N52A 1TGSI 1TUSA 2GKRI 2B0UC 3QTLD 1Y1BA 1PCEA 2JYYA 1SGPI 1SGNI 1SGEI 1YU6C 2GKVA 5JHWC
chains in the Genus database with same CATH superfamily
1HJAI 4HGUA 1OVOA 1WTJA 2SGQI 2QQDA 2ERWA 2GIVA 2WVJA 3UFFA 1IY6A 2GKTI 5CCMA 2DIPA 2Y0MA 1CT2I 3TO7A 1K7TA 2CWHA 1TBOA 1HPTA 2PQ8A 3FC3A 2JXDA 1FY7A 1ULMA 2K9HA 1FARA 2WGCA 5E3QA 1IY5A 1K7VA 1PJUA 1UHAA 1LR8A 1Q9BA 1Y1CA 3OVOA 1M8BA 5EX0A 4A24A 7WGAA 3VDUA 2BUSA 5J8CA 1WKXA 2E73A 2ODDA 1FAQA 1X4SA 3PDNA 4MPIA 2NU2I 1UVFA 1OMTA 4L9MA 5E3RA 1TBQR 3TO6A 2OD1A 2ENZA 1MJAA 1TIHA 1X74A 3UGIA 2KMOA 1Z7KB 4GI3C 2M5XA 1V1IA 2SGEI 1P9ZA 1CE3A 2J9RA 1XX6A 1TBNA 2CWFA 2N17A 4UXHA 3TOBA 2NU3I 2LB7A 2SGPI 3VE5A 5EX3A 5CCLA 4FKDA 1IW4A 2E5RA 3R5BA 1PTQA 1U5KA 3UOEA 2NU0I 1H0ZA 1TBRR 3SGQI 4AMLA 1R0RI 2FNFX 1HEVA 2ENNA 3BJIA 4UXIA 2UVOA 3GOXA 1BMOA 2A20A 3UGDA 5J8FA 3VDPA 1LR7A 1XBTA 1Z2IA 2JW6A 2JA1A 2L8EA 3FSXA 1P9GA 3OXGA 2N71A 2NU4I 1WGTA 2SGDI 1N13A 1NXUA 1KMAA 2YQPA 3E2IA 3SGBI 2LUYA 1AN1I 2RC4A 2J87A 3OXFA 5HQ8A 2P6AC 4DNCA 3SEKC 3HH2C 2CJSC 3QWPA 3R5DA 2KCXA 2DB6A 4JCVE 1BUSA 1ULNA 1SGYI 5FUYA 2F3CI 5FUXA 3CXLA 1CHOI 1TOTA 1OMUA 1CT4I 1SGRI 1V1HA 2JZMA 1PTRA 2X52A 5HI7A 3TO9A 2KMPA 1TURA 2WCYA 1W3SA 1KBEA 1MT1A 3OL0A 1PPFI 2YUUA 1K7UA 3UGLA 1CT0I 2OU2A 1VDDA 1SGQI 1OYVI 2QQ0A 1SGDI 1FYBA 4UXJA 2V53A 4WP4A 2X3TA 1YTPA 2QQCA 1CGJI 2OZUA 1NUBA 2KMQA 2KMRA 1UVGA 5FUWA 3TOAA 3TJQA 3E59A 4SGBI 9WGAA 1HDLA 1Y8FA 3R5AA 1DS3I 2NU1I 2QQEA 1M8CA 5DAEA 5E3PA 2OVOA 2CWGA 3R5CA 4E1PA 1XA6A 1CGII 2W0TA 1UUCA 1CSOI 1R79A 3D00A 2GVIA 3RU0A 1KBFA 1RFHA 1DS2I 4OVOA 2N1AB 2ELIA 3B4VC 1WGCA 2SGFI 5FUVA 2LEOA 2ORWA 2L7XA 2ARPF 2UZ3A 1LR9A 2V1CC 2RIJA 2VRWB 1MJ9A 2QPOA 1MJBA 2XRCA 2N52A 3OXLA 1TGSI 1TUSA 3KY9A 2V1CA 2GKRI 2B0UC 2DKVA 2ROWA 2ORVA 1Y1BA 3QTLD 4E1RA 1PCEA 2JYYA 1SGPI 1SGNI 3UEYA 1W4RA 1SGEI 1ULKA 1YU6C 2GKVA 3MEKA 3QAHA 2B8TA 1S20A 3UEJA 5JHWC 3FSYA 4B6DA
chains in the Genus database with same CATH topology
1HJAI 4HGUA 1OVOA 2SGQI 2QQDA 2ERWA 2WVJA 3UFFA 1IY6A 2GKTI 5CCMA 2DIPA 1CT2I 1TBOA 1HPTA 3FC3A 2JXDA 2K9HA 1IY5A 1FARA 1PJUA 1LR8A 1Y1CA 3OVOA 5EX0A 1M8BA 4A24A 3VDUA 2BUSA 2E73A 2ODDA 1FAQA 1X4SA 3PDNA 2NU2I 1UVFA 1OMTA 4L9MA 1TBQR 2OD1A 2ENZA 1TIHA 1X74A 3UGIA 2KMOA 1Z7KB 4GI3C 2M5XA 1V1IA 2SGEI 1CE3A 2J9RA 1XX6A 1TBNA 2N17A 4UXHA 2NU3I 2SGPI 3VE5A 5EX3A 5CCLA 4FKDA 1IW4A 2E5RA 1PTQA 1U5KA 1H0ZA 2NU0I 1TBRR 3SGQI 1R0RI 2FNFX 2ENNA 3BJIA 4UXIA 3GOXA 1BMOA 2A20A 3UGDA 3VDPA 1LR7A 1XBTA 2JW6A 2L8EA 2JA1A 3OXGA 2N71A 2NU4I 2SGDI 1N13A 1KMAA 2YQPA 3E2IA 3SGBI 2LUYA 1AN1I 3OXFA 2J87A 5HQ8A 2P6AC 3SEKC 3HH2C 2CJSC 3QWPA 2KCXA 2DB6A 4JCVE 1BUSA 1SGYI 5FUYA 2F3CI 5FUXA 3CXLA 1CHOI 1TOTA 1OMUA 1CT4I 1SGRI 1V1HA 2JZMA 1PTRA 5HI7A 2KMPA 1TURA 2WCYA 1W3SA 1KBEA 1MT1A 3OL0A 1PPFI 2YUUA 3UGLA 1CT0I 1VDDA 1SGQI 1OYVI 2QQ0A 1SGDI 1FYBA 4UXJA 2V53A 1YTPA 2QQCA 1CGJI 1NUBA 2KMQA 2KMRA 1UVGA 5FUWA 3TJQA 3E59A 4SGBI 1HDLA 1Y8FA 1DS3I 2NU1I 2QQEA 1M8CA 5DAEA 2OVOA 4E1PA 1XA6A 1CGII 2W0TA 1UUCA 1CSOI 1R79A 3D00A 2GVIA 3RU0A 1KBFA 1RFHA 1DS2I 4OVOA 2N1AB 2ELIA 3B4VC 2SGFI 2LEOA 2ORWA 2L7XA 2ARPF 2UZ3A 1LR9A 2V1CC 2VRWB 2QPOA 2XRCA 2N52A 3OXLA 1TGSI 1TUSA 3KY9A 2V1CA 2GKRI 2B0UC 2ROWA 2ORVA 1Y1BA 3QTLD 4E1RA 1PCEA 2JYYA 1SGPI 1SGNI 3UEYA 1W4RA 1SGEI 1YU6C 3MEKA 2GKVA 3UEJA 2B8TA 5JHWC 5FUVA 4B6DA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HJA I;  4HGU A;  1OVO A;  2SGQ I;  2QQD A;  2ERW A;  1IY6 A;  2GKT I;  1CT2 I;  1HPT A;  2JXD A;  1IY5 A;  1PJU A;  1LR8 A;  1Y1C A;  3OVO A;  1M8B A;  2BUS A;  2NU2 I;  1UVF A;  1OMT A;  1TBQ R;  1TIH A;  2KMO A;  1Z7K B;  4GI3 C;  2M5X A;  2SGE I;  1CE3 A;  2N17 A;  2NU3 I;  2SGP I;  1IW4 A;  1H0Z A;  2NU0 I;  1TBR R;  3SGQ I;  1R0R I;  1BMO A;  1LR7 A;  2N71 A;  2NU4 I;  2SGD I;  1N13 A;  1KMA A;  3SGB I;  1AN1 I;  2P6A C;  3SEK C;  3HH2 C;  2KCX A;  1BUS A;  1SGY I;  2F3C I;  1CHO I;  1OMU A;  1CT4 I;  1SGR I;  2JZM A;  2KMP A;  1TUR A;  2WCY A;  1MT1 A;  1PPF I;  1CT0 I;  1SGQ I;  1OYV I;  1SGD I;  1FYB A;  2V53 A;  1YTP A;  2QQC A;  1CGJ I;  1NUB A;  2KMQ A;  2KMR A;  1UVG A;  3TJQ A;  4SGB I;  1HDL A;  1DS3 I;  2NU1 I;  5DAE A;  1M8C A;  2OVO A;  1CGI I;  1UUC A;  1CSO I;  1DS2 I;  4OVO A;  3B4V C;  2SGF I;  2LEO A;  2ARP F;  1LR9 A;  2XRC A;  2N52 A;  1TGS I;  1TUS A;  2GKR I;  2B0U C;  3QTL D;  1Y1B A;  1PCE A;  2JYY A;  1SGP I;  1SGN I;  1SGE I;  1YU6 C;  2GKV A;  5JHW C; 
#chains in the Genus database with same CATH topology
 1HJA I;  4HGU A;  1OVO A;  1WTJ A;  2SGQ I;  2QQD A;  2ERW A;  2GIV A;  2WVJ A;  3UFF A;  1IY6 A;  2GKT I;  5CCM A;  2DIP A;  2Y0M A;  1CT2 I;  3TO7 A;  1K7T A;  2CWH A;  1TBO A;  1HPT A;  2PQ8 A;  3FC3 A;  2JXD A;  1FY7 A;  1ULM A;  2K9H A;  1FAR A;  2WGC A;  5E3Q A;  1IY5 A;  1K7V A;  1PJU A;  1UHA A;  1LR8 A;  1Q9B A;  1Y1C A;  3OVO A;  1M8B A;  5EX0 A;  4A24 A;  7WGA A;  3VDU A;  2BUS A;  5J8C A;  1WKX A;  2E73 A;  2ODD A;  1FAQ A;  1X4S A;  3PDN A;  4MPI A;  2NU2 I;  1UVF A;  1OMT A;  4L9M A;  5E3R A;  1TBQ R;  3TO6 A;  2OD1 A;  2ENZ A;  1MJA A;  1TIH A;  1X74 A;  3UGI A;  2KMO A;  1Z7K B;  4GI3 C;  2M5X A;  1V1I A;  2SGE I;  1P9Z A;  1CE3 A;  2J9R A;  1XX6 A;  1TBN A;  2CWF A;  2N17 A;  4UXH A;  3TOB A;  2NU3 I;  2LB7 A;  2SGP I;  3VE5 A;  5EX3 A;  5CCL A;  4FKD A;  1IW4 A;  2E5R A;  3R5B A;  1PTQ A;  1U5K A;  3UOE A;  2NU0 I;  1H0Z A;  1TBR R;  3SGQ I;  4AML A;  1R0R I;  2FNF X;  1HEV A;  2ENN A;  3BJI A;  4UXI A;  2UVO A;  3GOX A;  1BMO A;  2A20 A;  3UGD A;  5J8F A;  3VDP A;  1LR7 A;  1XBT A;  1Z2I A;  2JW6 A;  2JA1 A;  2L8E A;  3FSX A;  1P9G A;  3OXG A;  2N71 A;  2NU4 I;  1WGT A;  2SGD I;  1N13 A;  1NXU A;  1KMA A;  2YQP A;  3E2I A;  3SGB I;  2LUY A;  1AN1 I;  2RC4 A;  2J87 A;  3OXF A;  5HQ8 A;  2P6A C;  4DNC A;  3SEK C;  3HH2 C;  2CJS C;  3QWP A;  3R5D A;  2KCX A;  2DB6 A;  4JCV E;  1BUS A;  1ULN A;  1SGY I;  5FUY A;  2F3C I;  5FUX A;  3CXL A;  1CHO I;  1TOT A;  1OMU A;  1CT4 I;  1SGR I;  1V1H A;  2JZM A;  1PTR A;  2X52 A;  5HI7 A;  3TO9 A;  2KMP A;  1TUR A;  2WCY A;  1W3S A;  1KBE A;  1MT1 A;  3OL0 A;  1PPF I;  2YUU A;  1K7U A;  3UGL A;  1CT0 I;  2OU2 A;  1VDD A;  1SGQ I;  1OYV I;  2QQ0 A;  1SGD I;  1FYB A;  4UXJ A;  2V53 A;  4WP4 A;  2X3T A;  1YTP A;  2QQC A;  1CGJ I;  2OZU A;  1NUB A;  2KMQ A;  2KMR A;  1UVG A;  5FUW A;  3TOA A;  3TJQ A;  3E59 A;  4SGB I;  9WGA A;  1HDL A;  1Y8F A;  3R5A A;  1DS3 I;  2NU1 I;  2QQE A;  1M8C A;  5DAE A;  5E3P A;  2OVO A;  2CWG A;  3R5C A;  4E1P A;  1XA6 A;  1CGI I;  2W0T A;  1UUC A;  1CSO I;  1R79 A;  3D00 A;  2GVI A;  3RU0 A;  1KBF A;  1RFH A;  1DS2 I;  4OVO A;  2N1A B;  2ELI A;  3B4V C;  1WGC A;  2SGF I;  5FUV A;  2LEO A;  2ORW A;  2L7X A;  2ARP F;  2UZ3 A;  1LR9 A;  2V1C C;  2RIJ A;  2VRW B;  1MJ9 A;  2QPO A;  1MJB A;  2XRC A;  2N52 A;  3OXL A;  1TGS I;  1TUS A;  3KY9 A;  2V1C A;  2GKR I;  2B0U C;  2DKV A;  2ROW A;  2ORV A;  1Y1B A;  3QTL D;  4E1R A;  1PCE A;  2JYY A;  1SGP I;  1SGN I;  3UEY A;  1W4R A;  1SGE I;  1ULK A;  1YU6 C;  2GKV A;  3MEK A;  3QAH A;  2B8T A;  1S20 A;  3UEJ A;  5JHW C;  3FSY A;  4B6D A; 
#chains in the Genus database with same CATH homology
 1HJA I;  4HGU A;  1OVO A;  2SGQ I;  2QQD A;  2ERW A;  2WVJ A;  3UFF A;  1IY6 A;  2GKT I;  5CCM A;  2DIP A;  1CT2 I;  1TBO A;  1HPT A;  3FC3 A;  2JXD A;  2K9H A;  1IY5 A;  1FAR A;  1PJU A;  1LR8 A;  1Y1C A;  3OVO A;  5EX0 A;  1M8B A;  4A24 A;  3VDU A;  2BUS A;  2E73 A;  2ODD A;  1FAQ A;  1X4S A;  3PDN A;  2NU2 I;  1UVF A;  1OMT A;  4L9M A;  1TBQ R;  2OD1 A;  2ENZ A;  1TIH A;  1X74 A;  3UGI A;  2KMO A;  1Z7K B;  4GI3 C;  2M5X A;  1V1I A;  2SGE I;  1CE3 A;  2J9R A;  1XX6 A;  1TBN A;  2N17 A;  4UXH A;  2NU3 I;  2SGP I;  3VE5 A;  5EX3 A;  5CCL A;  4FKD A;  1IW4 A;  2E5R A;  1PTQ A;  1U5K A;  1H0Z A;  2NU0 I;  1TBR R;  3SGQ I;  1R0R I;  2FNF X;  2ENN A;  3BJI A;  4UXI A;  3GOX A;  1BMO A;  2A20 A;  3UGD A;  3VDP A;  1LR7 A;  1XBT A;  2JW6 A;  2L8E A;  2JA1 A;  3OXG A;  2N71 A;  2NU4 I;  2SGD I;  1N13 A;  1KMA A;  2YQP A;  3E2I A;  3SGB I;  2LUY A;  1AN1 I;  3OXF A;  2J87 A;  5HQ8 A;  2P6A C;  3SEK C;  3HH2 C;  2CJS C;  3QWP A;  2KCX A;  2DB6 A;  4JCV E;  1BUS A;  1SGY I;  5FUY A;  2F3C I;  5FUX A;  3CXL A;  1CHO I;  1TOT A;  1OMU A;  1CT4 I;  1SGR I;  1V1H A;  2JZM A;  1PTR A;  5HI7 A;  2KMP A;  1TUR A;  2WCY A;  1W3S A;  1KBE A;  1MT1 A;  3OL0 A;  1PPF I;  2YUU A;  3UGL A;  1CT0 I;  1VDD A;  1SGQ I;  1OYV I;  2QQ0 A;  1SGD I;  1FYB A;  4UXJ A;  2V53 A;  1YTP A;  2QQC A;  1CGJ I;  1NUB A;  2KMQ A;  2KMR A;  1UVG A;  5FUW A;  3TJQ A;  3E59 A;  4SGB I;  1HDL A;  1Y8F A;  1DS3 I;  2NU1 I;  2QQE A;  1M8C A;  5DAE A;  2OVO A;  4E1P A;  1XA6 A;  1CGI I;  2W0T A;  1UUC A;  1CSO I;  1R79 A;  3D00 A;  2GVI A;  3RU0 A;  1KBF A;  1RFH A;  1DS2 I;  4OVO A;  2N1A B;  2ELI A;  3B4V C;  2SGF I;  2LEO A;  2ORW A;  2L7X A;  2ARP F;  2UZ3 A;  1LR9 A;  2V1C C;  2VRW B;  2QPO A;  2XRC A;  2N52 A;  3OXL A;  1TGS I;  1TUS A;  3KY9 A;  2V1C A;  2GKR I;  2B0U C;  2ROW A;  2ORV A;  1Y1B A;  3QTL D;  4E1R A;  1PCE A;  2JYY A;  1SGP I;  1SGN I;  3UEY A;  1W4R A;  1SGE I;  1YU6 C;  3MEK A;  2GKV A;  3UEJ A;  2B8T A;  5JHW C;  5FUV A;  4B6D A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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