2ANEA

Crystal structure of n-terminal domain of e.coli lon protease
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
110
structure length
110
Chain Sequence
RIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISALSDNGEHFSAKAEYL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords ATP-dependent protease La
publication title Crystal structure of the N-terminal domain of E. coli Lon protease.
pubmed doi rcsb
source organism Escherichia coli
total genus 27
structure length 110
sequence length 110
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature ec 3.4.21.53: Endopeptidase La.
pdb deposition date 2005-08-11
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.130.40 Mainly Beta Roll Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 LON domain-like 2aneA00
2ANEA 4CI3B 4TZ4C 4CI1B 3LJCA 4CI2B 1ZBOA 3M65A
chains in the Genus database with same CATH superfamily
1XNEA 3UAIA 3VSEA 1WK2A 1IT7A 1ZE2A 3U28A 2DP9A 3HJWA 1SGVA 3LJCA 3LDFA 1ZBOA 3LWQA 3M6XA 3M65A 4Q1TA 3LWOA 2AS0A 3D79A 3M6UA 3LWVA 3IUWA 2ANEA 1S04A 1K8WA 2J5TA 2B78A 2CX1A 2HVYA 1WXWA 1IQ8A 3MQKA 4CI2B 1IT8A 1J2BA 2FRXA 2J5VA 2Q07A 2AB4A 2EY4A 2E5OA 1TE7A 1R3FA 3M6VA 4TZ4C 3ZV0C 4CI1B 2CX0A 1ZS7A 1ZL3A 1UOYA 2CWWA 3C0KA 1WXXA 3HJYA 3M4XA 4DMGA 2KKUA 2Z0TA 2P38A 3LWPA 4CI3B 1SQWA 3LWRA 1R3EA 1Q7HA 2RFKA 3M6WA 2APOA 2AUSA 3HAXA 1ZE1A 1T5YA
chains in the Genus database with same CATH topology
2ANEA 4CI3B 4TZ4C 4CI1B 3LJCA 4CI2B 1ZBOA 3M65A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ANE A;  4CI3 B;  4TZ4 C;  4CI1 B;  3LJC A;  4CI2 B;  1ZBO A;  3M65 A; 
#chains in the Genus database with same CATH topology
 1XNE A;  3UAI A;  3VSE A;  1WK2 A;  1IT7 A;  1ZE2 A;  3U28 A;  2DP9 A;  3HJW A;  1SGV A;  3LJC A;  3LDF A;  1ZBO A;  3LWQ A;  3M6X A;  3M65 A;  4Q1T A;  3LWO A;  2AS0 A;  3D79 A;  3M6U A;  3LWV A;  3IUW A;  2ANE A;  1S04 A;  1K8W A;  2J5T A;  2B78 A;  2CX1 A;  2HVY A;  1WXW A;  1IQ8 A;  3MQK A;  4CI2 B;  1IT8 A;  1J2B A;  2FRX A;  2J5V A;  2Q07 A;  2AB4 A;  2EY4 A;  2E5O A;  1TE7 A;  1R3F A;  3M6V A;  4TZ4 C;  3ZV0 C;  4CI1 B;  2CX0 A;  1ZS7 A;  1ZL3 A;  1UOY A;  2CWW A;  3C0K A;  1WXX A;  3HJY A;  3M4X A;  4DMG A;  2KKU A;  2Z0T A;  2P38 A;  3LWP A;  4CI3 B;  1SQW A;  3LWR A;  1R3E A;  1Q7H A;  2RFK A;  3M6W A;  2APO A;  2AUS A;  3HAX A;  1ZE1 A;  1T5Y A; 
#chains in the Genus database with same CATH homology
 2ANE A;  4CI3 B;  4TZ4 C;  4CI1 B;  3LJC A;  4CI2 B;  1ZBO A;  3M65 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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