2DBHA

Solution structure of the carboxyl-terminal card-like domain in human tnfr-related death receptor-6
Total Genus 20
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
102
structure length
102
Chain Sequence
GSSGSSGSSALSRNGSFITKEKKDTVLRQVRLDPCDLQPIFDDMLHFLNPEELRVIEEIPQAEDKLDRLFEIIGVKSQEASQTLLDSVYSHLPDLLSGPSSG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Signaling protein
molecule keywords Tumor necrosis factor receptor superfamily member 21
publication title Solution structure of the carboxyl-terminal CARD-like domain in human TNFR-related death receptor-6
rcsb
source organism Homo sapiens
total genus 20
structure length 102
sequence length 102
ec nomenclature
pdb deposition date 2005-12-15
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 2dbhA01
4IZAB 1DDFA 2MN4A 3LQQA 2LS7A 4N1KA 1FADA 3MOPG 3J63A 1D2ZB 1A1ZA 2NSNA 1NGRA 1WMGA 4M9XA 4O9LA 2VGQA 3LQRA 3J6JA 1CWWA 4ZBWA 4N1JA 1D2ZA 2KN6A 4E9MA 4NQKA 2N97A 2YQFA 1CY5A 4QOBA 4P4HA 2LWDA 3CRDA 4O9FA 4D8OA 2A5YB 2OF5A 3EZQB 1E41A 2D96A 2KM6A 4M9SA 4F42A 2NAQA 2N7ZA 4JUPA 2YU0A 2MS7A 4IZ5E 4IZ7B 3EZQA 2DBFA 1WXPA 1WH4A 4F44A 2N1FA 2HM2Q 4A2WA 2DBHA 2L9MA 2B1WA 4JQWA 1DGNA 1YGOA 3QF2A 2O71A 2BBRA 1Z6TA 1A1WA 1ICHA 2L6AA 4EWIA 4O7QA 2GF5A 2NZ7A 4I16A 3YGSP 2P1HA 1PN5A 4FH0A 2DBGA 4UZ0A 1UCPA 2A9IA 2N80A 4N1LA 2BBZA 2F1SA 2MPCA 2N83A 4LWDA 3CL3A 1N3KA 4RHWA 2MB9A 2DBDA 1C15A 2LWEA 2N00A 4DWNA 2OF5H 3MOPK 2IB1A 3MOPA 4P4HI 2MS8A 4M9ZA 3T6PA 2YGSA 4O6XA 3KATA 1E3YA 3YGSC 2YVIA 2DO9A 2G7RA 2M5VA 4RHWE 4A2QA
chains in the Genus database with same CATH superfamily
4IZAB 1DDFA 2MN4A 3LQQA 2LS7A 4N1KA 1FADA 3MOPG 3J63A 1D2ZB 1A1ZA 2NSNA 1NGRA 1WMGA 4M9XA 4O9LA 2VGQA 2XV9A 3LQRA 3J6JA 1CWWA 4ZBWA 4N1JA 1D2ZA 2KN6A 4E9MA 4NQKA 2N97A 2YQFA 1CY5A 4QOBA 4P4HA 2LWDA 3CRDA 4O9FA 4D8OA 2A5YB 2OF5A 3EZQB 1E41A 2D96A 2KM6A 4M9SA 4F42A 2NAQA 2N7ZA 4JUPA 2YU0A 2MS7A 4IZ5E 4IZ7B 3EZQA 2DBFA 1WXPA 1WH4A 4F44A 2N1FA 2HM2Q 2MJMA 4A2WA 2DBHA 2L9MA 2B1WA 4JQWA 1DGNA 1YGOA 3QF2A 2O71A 2BBRA 1Z6TA 1A1WA 1ICHA 2L6AA 4EWIA 4O7QA 2GF5A 2NZ7A 4I16A 3YGSP 2P1HA 1PN5A 4FH0A 2DBGA 4UZ0A 1UCPA 2A9IA 2N80A 4N1LA 2BBZA 2F1SA 2MPCA 2N83A 4LWDA 3CL3A 1N3KA 4RHWA 2MB9A 2DBDA 1C15A 2LWEA 2N00A 4DWNA 2OF5H 3MOPK 2IB1A 3MOPA 4P4HI 2MS8A 4M9ZA 3T6PA 2YGSA 4O6XA 3KATA 1E3YA 3YGSC 2YVIA 2DO9A 2G7RA 2M5VA 4RHWE 4A2QA
chains in the Genus database with same CATH topology
4IZAB 1DDFA 2MN4A 3LQQA 2LS7A 4N1KA 1FADA 3MOPG 3J63A 1D2ZB 1A1ZA 2NSNA 1NGRA 1WMGA 4M9XA 4O9LA 2VGQA 2XV9A 3LQRA 3J6JA 1CWWA 4ZBWA 4N1JA 1D2ZA 2KN6A 4E9MA 4NQKA 2N97A 2YQFA 1CY5A 4QOBA 4P4HA 2LWDA 3CRDA 4O9FA 4D8OA 2A5YB 2OF5A 3EZQB 1E41A 2D96A 2KM6A 4M9SA 4F42A 2NAQA 2N7ZA 4JUPA 2YU0A 2MS7A 4IZ5E 4IZ7B 3EZQA 2DBFA 1WXPA 1WH4A 4F44A 2N1FA 2HM2Q 2MJMA 4A2WA 2DBHA 2L9MA 2B1WA 4JQWA 1DGNA 1YGOA 3QF2A 2O71A 2BBRA 1Z6TA 1A1WA 1ICHA 2L6AA 4EWIA 4O7QA 2GF5A 2NZ7A 4I16A 3YGSP 2P1HA 1PN5A 4FH0A 2DBGA 4UZ0A 1UCPA 2A9IA 2N80A 4N1LA 2BBZA 2F1SA 2MPCA 2N83A 4LWDA 3CL3A 1N3KA 4RHWA 2MB9A 2DBDA 1C15A 2LWEA 2N00A 4DWNA 2OF5H 3MOPK 2IB1A 3MOPA 4P4HI 2MS8A 4M9ZA 3T6PA 2YGSA 4O6XA 3KATA 1E3YA 3YGSC 2YVIA 2DO9A 2G7RA 2M5VA 4RHWE 4A2QA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IZA B;  1DDF A;  2MN4 A;  3LQQ A;  2LS7 A;  4N1K A;  1FAD A;  3MOP G;  3J63 A;  1D2Z B;  1A1Z A;  2NSN A;  1NGR A;  1WMG A;  4M9X A;  4O9L A;  2VGQ A;  3LQR A;  3J6J A;  1CWW A;  4ZBW A;  4N1J A;  1D2Z A;  2KN6 A;  4E9M A;  4NQK A;  2N97 A;  2YQF A;  1CY5 A;  4QOB A;  4P4H A;  2LWD A;  3CRD A;  4O9F A;  4D8O A;  2A5Y B;  2OF5 A;  3EZQ B;  1E41 A;  2D96 A;  2KM6 A;  4M9S A;  4F42 A;  2NAQ A;  2N7Z A;  4JUP A;  2YU0 A;  2MS7 A;  4IZ5 E;  4IZ7 B;  3EZQ A;  2DBF A;  1WXP A;  1WH4 A;  4F44 A;  2N1F A;  2HM2 Q;  4A2W A;  2DBH A;  2L9M A;  2B1W A;  4JQW A;  1DGN A;  1YGO A;  3QF2 A;  2O71 A;  2BBR A;  1Z6T A;  1A1W A;  1ICH A;  2L6A A;  4EWI A;  4O7Q A;  2GF5 A;  2NZ7 A;  4I16 A;  3YGS P;  2P1H A;  1PN5 A;  4FH0 A;  2DBG A;  4UZ0 A;  1UCP A;  2A9I A;  2N80 A;  4N1L A;  2BBZ A;  2F1S A;  2MPC A;  2N83 A;  4LWD A;  3CL3 A;  1N3K A;  4RHW A;  2MB9 A;  2DBD A;  1C15 A;  2LWE A;  2N00 A;  4DWN A;  2OF5 H;  3MOP K;  2IB1 A;  3MOP A;  4P4H I;  2MS8 A;  4M9Z A;  3T6P A;  2YGS A;  4O6X A;  3KAT A;  1E3Y A;  3YGS C;  2YVI A;  2DO9 A;  2G7R A;  2M5V A;  4RHW E;  4A2Q A; 
#chains in the Genus database with same CATH topology
 4IZA B;  1DDF A;  2MN4 A;  3LQQ A;  2LS7 A;  4N1K A;  1FAD A;  3MOP G;  3J63 A;  1D2Z B;  1A1Z A;  2NSN A;  1NGR A;  1WMG A;  4M9X A;  4O9L A;  2VGQ A;  2XV9 A;  3LQR A;  3J6J A;  1CWW A;  4ZBW A;  4N1J A;  1D2Z A;  2KN6 A;  4E9M A;  4NQK A;  2N97 A;  2YQF A;  1CY5 A;  4QOB A;  4P4H A;  2LWD A;  3CRD A;  4O9F A;  4D8O A;  2A5Y B;  2OF5 A;  3EZQ B;  1E41 A;  2D96 A;  2KM6 A;  4M9S A;  4F42 A;  2NAQ A;  2N7Z A;  4JUP A;  2YU0 A;  2MS7 A;  4IZ5 E;  4IZ7 B;  3EZQ A;  2DBF A;  1WXP A;  1WH4 A;  4F44 A;  2N1F A;  2HM2 Q;  2MJM A;  4A2W A;  2DBH A;  2L9M A;  2B1W A;  4JQW A;  1DGN A;  1YGO A;  3QF2 A;  2O71 A;  2BBR A;  1Z6T A;  1A1W A;  1ICH A;  2L6A A;  4EWI A;  4O7Q A;  2GF5 A;  2NZ7 A;  4I16 A;  3YGS P;  2P1H A;  1PN5 A;  4FH0 A;  2DBG A;  4UZ0 A;  1UCP A;  2A9I A;  2N80 A;  4N1L A;  2BBZ A;  2F1S A;  2MPC A;  2N83 A;  4LWD A;  3CL3 A;  1N3K A;  4RHW A;  2MB9 A;  2DBD A;  1C15 A;  2LWE A;  2N00 A;  4DWN A;  2OF5 H;  3MOP K;  2IB1 A;  3MOP A;  4P4H I;  2MS8 A;  4M9Z A;  3T6P A;  2YGS A;  4O6X A;  3KAT A;  1E3Y A;  3YGS C;  2YVI A;  2DO9 A;  2G7R A;  2M5V A;  4RHW E;  4A2Q A; 
#chains in the Genus database with same CATH homology
 4IZA B;  1DDF A;  2MN4 A;  3LQQ A;  2LS7 A;  4N1K A;  1FAD A;  3MOP G;  3J63 A;  1D2Z B;  1A1Z A;  2NSN A;  1NGR A;  1WMG A;  4M9X A;  4O9L A;  2VGQ A;  2XV9 A;  3LQR A;  3J6J A;  1CWW A;  4ZBW A;  4N1J A;  1D2Z A;  2KN6 A;  4E9M A;  4NQK A;  2N97 A;  2YQF A;  1CY5 A;  4QOB A;  4P4H A;  2LWD A;  3CRD A;  4O9F A;  4D8O A;  2A5Y B;  2OF5 A;  3EZQ B;  1E41 A;  2D96 A;  2KM6 A;  4M9S A;  4F42 A;  2NAQ A;  2N7Z A;  4JUP A;  2YU0 A;  2MS7 A;  4IZ5 E;  4IZ7 B;  3EZQ A;  2DBF A;  1WXP A;  1WH4 A;  4F44 A;  2N1F A;  2HM2 Q;  2MJM A;  4A2W A;  2DBH A;  2L9M A;  2B1W A;  4JQW A;  1DGN A;  1YGO A;  3QF2 A;  2O71 A;  2BBR A;  1Z6T A;  1A1W A;  1ICH A;  2L6A A;  4EWI A;  4O7Q A;  2GF5 A;  2NZ7 A;  4I16 A;  3YGS P;  2P1H A;  1PN5 A;  4FH0 A;  2DBG A;  4UZ0 A;  1UCP A;  2A9I A;  2N80 A;  4N1L A;  2BBZ A;  2F1S A;  2MPC A;  2N83 A;  4LWD A;  3CL3 A;  1N3K A;  4RHW A;  2MB9 A;  2DBD A;  1C15 A;  2LWE A;  2N00 A;  4DWN A;  2OF5 H;  3MOP K;  2IB1 A;  3MOP A;  4P4H I;  2MS8 A;  4M9Z A;  3T6P A;  2YGS A;  4O6X A;  3KAT A;  1E3Y A;  3YGS C;  2YVI A;  2DO9 A;  2G7R A;  2M5V A;  4RHW E;  4A2Q A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...