2FVFA

Structure of 10:0-acp (protein with docked fatty acid)
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
82
structure length
82
Chain Sequence
AKKETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLEKKA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
molecule keywords Acyl Carrier Protein
publication title Solution structures of spinach acyl carrier protein with decanoate and stearate
pubmed doi rcsb
source organism Spinacia oleracea
total genus 21
structure length 82
sequence length 82
ec nomenclature
pdb deposition date 2006-01-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2fvfA00
2KGCA 4BPFA 4H2WC 2JQ4A 2FADA 2JU2A 2CQ8A 2MR8A 2KGEA 2EHTA 4BPHA 5HVCA 2FVFA 1T8KA 1L0IA 2MVUA 2KOQA 2KOPA 3RG2A 2FAEA 2KWLA 2X2BA 4IZ6A 1ACPA 2MF4A 3CE7A 2MD9A 2JU1A 4PWVB 2FQ2A 2KR5A 2AFDA 2FQ1A 4DG9A 1L0HA 2KOOA 2KOSA 2MY5A 2GDYA 2MR7A 1F80D 2K93A 2LPKA 4NEOA 4H2XC 3LMOA 5HV8A 2L9FA 2LL8A 2KG9A 2CG5B 2N98A 3EJBA 2L22A 2CNRA 2LTEA 2EHSA 2LIUA 2M5RA 2LMLA 1KLPA 2LOLA 4R0MA 4H2YC 5KP8B 4BPGA 2K92A 2XZ1C 1X3OA 2GDXA 3GZLA 1HY8A 2K94A 4HKGA 2N6YA 2KGDA 5KP7B 2FVAA 2CGQA 2LIWA 5KP6B 2N50A 2AFEA 2DNWA 3EJEA 2AF8A 2FHSC 2JGPA 2FACA 2PNGA 2ROQA 1AF8A 5EJDA 2N6ZA 2LKIA 2K2QA 2K0YA 2N5HA 3EJDA 2FQ0A 2FVEA 2KORA 2KGAA 1DNYA 5CZDB 1VKUA 1DV5A 4CA3A 3NY7B 3GZMA 2N5IA 1OR5A 2KG6A 1NQ4A 2AVAA 2KW2A 2L4BA 2VSQA 4MRTC 2XZ0D 1HQBA 2QNWA 2GDWA 2KG8A 2L0QA 2K0XA 4PXHB 2MVVA
chains in the Genus database with same CATH superfamily
3CPWO 2VLPA 1YIJP 2MR8A 1AUMA 2KGEA 3CCLP 3G29A 2PENA 1T8KA 1IMPA 4GR6A 2KWLA 1M74A 3B4QA 5EW5E 4M0IA 2VLNA 2M8LA 1E0HA 2MD9A 2JU1A 4PWVB 3GKLC 4DG9A 2JB0A 2M8PA 1K30A 2GDYA 1YJ9P 1EMVA 4H2XC 2L9FA 1K73Q 3EJBA 2CNRA 2LTEA 2EHSA 2PEQA 2M5RA 3G1IA 4F37A 4H2YC 3CCVP 3P05A 3CMEP 2XT1A 1X3OA 2E1MA 2GDXA 4GR2A 4PH1A 2N6YA 2LIWA 1QRJA 1D1DA 4U0CA 5F2KA 1VHNA 3WBHA 2FHSC 1K8AQ 4WYMA 2FACA 3G4SP 3G26A 3DS5A 3DTJA 2FQ0A 1W2BO 1Q82Q 3NTEA 1DNYA 2JYLA 2JAZA 1BAJA 3H47A 2XV6A 3HYBA 3GZMA 2N5IA 2KG6A 1Q7YQ 2GZGA 3G71P 3VRLC 2AVAA 3GJNA 3H4EA 1HQBA 2QNWA 2GDWA 4PXHB 4BPFA 4H2WC 1A43A 2FADA 2JU2A 2JBGA 2EHTA 4BPHA 1RNIA 2FVFA 4QKOA 3CCMP 1IUQA 1YI2P 1VQ7P 3RG2A 5I4TG 4XFZA 2MF4A 1NJIQ 2BUOA 2AFDA 2GZJA 2FQ1A 3LRYA 1VQKP 1M90Q 2EFJA 2MR7A 3DS2A 2LPKA 1GXGA 4NEOA 2K0DX 2CG5B 2LF4A 2QEXP 2LIUA 5HGOA 4XFXA 4R0MA 2VLOA 1M6NA 1RO2A 4U0FA 3GZLA 1A8OA 4HKGA 2PEIA 2OTLP 2AFEA 2EG5A 3B5IA 3CC2P 5HGNA 2NO8A 2PNGA 2ROQA 1KC8Q 4XFYA 2LKIA 1M1KQ 2K2QA 3DS3A 2JYGA 2BHVA 5CZDB 1VKUA 2P9XA 3NY7B 1YITP 4U0EA 2L4BA 1UJZA 2L6EA 1E6JP 1VQOP 2KG8A 1BXIA 2KGCA 2PY8A 4U0AA 2Z46A 1AYIA 4XRQA 5HGMA 2MVUA 2KOQA 2X2BA 4IZ6A 3CE7A 2FQ2A 2KR5A 1GXHA 4IPYA 3G28A 2KOOA 2WPTA 2MY5A 2GZFA 2PEOA 2K93A 2XXMA 2OARA 1QVGO 3CCQP 3CXCO 3DS4A 2KODA 3LMOA 5HV8A 3OW2O 2LL8A 2Z45A 2N98A 2L22A 3G1GA 1Q86Q 1KLPA 2EIAA 2K92A 2XZ1C 4COPA 1N8RQ 1VQ9P 2K94A 1Z6MA 4PH0A 2KGDA 2PEKA 5HGLA 3CD6P 1UNKA 2FVAA 2K5XA 3CCRP 3M1MA 2N50A 1KD1Q 2DNWA 1IMQA 5DCKA 1VQPP 1RO0A 1AF8A 1FR2A 5EJDA 2N6ZA 1Q81Q 2N5HA 2VLQA 3G0VA 2KORA 2CWOA 7CEIA 1YHQP 2GZEA 4CA3A 1K9MQ 2JO0A 3DPHA 1CEIA 2VSQA 3E2DA 1S72P 4XROA 2XZ0D 1VQ8P 5JPAA 2L0QA 3G21A 3CCJP 3CMAP 2JQ4A 2CQ8A 3I55P 5F2NA 5HVCA 2ONTA 2M8NA 1MZ8A 2PEJA 1L0IA 2KOPA 2FAEA 3G6EP 1GPJA 1ACPA 1YJNP 1VQMP 2OTJP 3CCEP 1VQLP 1EIAA 1L0HA 2KOSA 3HZQA 1F80D 3CCSP 4QNBA 3MGEA 5BS2A 2KG9A 1EOQA 4U0DA 2LMLA 3CCUP 2LOLA 5KP8B 4BPGA 2ERHA 3CC7P 2GYKA 1HY8A 3RG6C 5KP7B 3CC4P 2CGQA 5KP6B 1YJWP 2GZIA 3EJEA 3Q20A 3U43A 2AF8A 2JGPA 4UHPB 1VQ4P 1VQ6P 2Z44A 3DS1A 3DS0A 2DGYA 5BS1A 4COCA 2K0YA 3I56P 3EJDA 2FVEA 2KGAA 1ZNVA 1VQNP 1DV5A 5F2OA 1VQ5P 1KQSO 1M6EX 1OR5A 1ZMBA 2QA4P 1NQ4A 2PEMA 2KW2A 4U0BA 1JJ2O 3H0DA 4MRTC 1QVFO 2K0XA 2MVVA
chains in the Genus database with same CATH topology
2KGCA 4BPFA 4H2WC 2JQ4A 2FADA 2JU2A 2CQ8A 2MR8A 2KGEA 2EHTA 4BPHA 5HVCA 2FVFA 1T8KA 1L0IA 2MVUA 2KOQA 2KOPA 3RG2A 2FAEA 2KWLA 2X2BA 4IZ6A 1ACPA 2MF4A 3CE7A 2MD9A 2JU1A 4PWVB 2FQ2A 2KR5A 2AFDA 2FQ1A 4DG9A 1L0HA 2KOOA 2KOSA 2MY5A 2GDYA 2MR7A 1F80D 2K93A 2LPKA 4NEOA 4H2XC 3LMOA 5HV8A 2L9FA 2LL8A 2KG9A 2CG5B 2N98A 3EJBA 2L22A 2CNRA 2LTEA 2EHSA 2LIUA 2M5RA 2LMLA 1KLPA 2LOLA 4R0MA 4H2YC 5KP8B 4BPGA 2K92A 2XZ1C 1X3OA 2GDXA 3GZLA 1HY8A 2K94A 4HKGA 2N6YA 2KGDA 5KP7B 2FVAA 2CGQA 2LIWA 5KP6B 2N50A 2AFEA 2DNWA 3EJEA 2AF8A 2FHSC 2JGPA 2FACA 2PNGA 2ROQA 1AF8A 5EJDA 2N6ZA 2LKIA 2K2QA 2K0YA 2N5HA 3EJDA 2FQ0A 2FVEA 2KORA 2KGAA 1DNYA 5CZDB 1VKUA 1DV5A 4CA3A 3NY7B 3GZMA 2N5IA 1OR5A 2KG6A 1NQ4A 2AVAA 2KW2A 2L4BA 2VSQA 4MRTC 2XZ0D 1HQBA 2QNWA 2GDWA 2KG8A 2L0QA 2K0XA 4PXHB 2MVVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KGC A;  4BPF A;  4H2W C;  2JQ4 A;  2FAD A;  2JU2 A;  2CQ8 A;  2MR8 A;  2KGE A;  2EHT A;  4BPH A;  5HVC A;  2FVF A;  1T8K A;  1L0I A;  2MVU A;  2KOQ A;  2KOP A;  3RG2 A;  2FAE A;  2KWL A;  2X2B A;  4IZ6 A;  1ACP A;  2MF4 A;  3CE7 A;  2MD9 A;  2JU1 A;  4PWV B;  2FQ2 A;  2KR5 A;  2AFD A;  2FQ1 A;  4DG9 A;  1L0H A;  2KOO A;  2KOS A;  2MY5 A;  2GDY A;  2MR7 A;  1F80 D;  2K93 A;  2LPK A;  4NEO A;  4H2X C;  3LMO A;  5HV8 A;  2L9F A;  2LL8 A;  2KG9 A;  2CG5 B;  2N98 A;  3EJB A;  2L22 A;  2CNR A;  2LTE A;  2EHS A;  2LIU A;  2M5R A;  2LML A;  1KLP A;  2LOL A;  4R0M A;  4H2Y C;  5KP8 B;  4BPG A;  2K92 A;  2XZ1 C;  1X3O A;  2GDX A;  3GZL A;  1HY8 A;  2K94 A;  4HKG A;  2N6Y A;  2KGD A;  5KP7 B;  2FVA A;  2CGQ A;  2LIW A;  5KP6 B;  2N50 A;  2AFE A;  2DNW A;  3EJE A;  2AF8 A;  2FHS C;  2JGP A;  2FAC A;  2PNG A;  2ROQ A;  1AF8 A;  5EJD A;  2N6Z A;  2LKI A;  2K2Q A;  2K0Y A;  2N5H A;  3EJD A;  2FQ0 A;  2FVE A;  2KOR A;  2KGA A;  1DNY A;  5CZD B;  1VKU A;  1DV5 A;  4CA3 A;  3NY7 B;  3GZM A;  2N5I A;  1OR5 A;  2KG6 A;  1NQ4 A;  2AVA A;  2KW2 A;  2L4B A;  2VSQ A;  4MRT C;  2XZ0 D;  1HQB A;  2QNW A;  2GDW A;  2KG8 A;  2L0Q A;  2K0X A;  4PXH B;  2MVV A; 
#chains in the Genus database with same CATH topology
 3CPW O;  2VLP A;  1YIJ P;  2MR8 A;  1AUM A;  2KGE A;  3CCL P;  3G29 A;  2PEN A;  1T8K A;  1IMP A;  4GR6 A;  2KWL A;  1M74 A;  3B4Q A;  5EW5 E;  4M0I A;  2VLN A;  2M8L A;  1E0H A;  2MD9 A;  2JU1 A;  4PWV B;  3GKL C;  4DG9 A;  2JB0 A;  2M8P A;  1K30 A;  2GDY A;  1YJ9 P;  1EMV A;  4H2X C;  2L9F A;  1K73 Q;  3EJB A;  2CNR A;  2LTE A;  2EHS A;  2PEQ A;  2M5R A;  3G1I A;  4F37 A;  4H2Y C;  3CCV P;  3P05 A;  3CME P;  2XT1 A;  1X3O A;  2E1M A;  2GDX A;  4GR2 A;  4PH1 A;  2N6Y A;  2LIW A;  1QRJ A;  1D1D A;  4U0C A;  5F2K A;  1VHN A;  3WBH A;  2FHS C;  1K8A Q;  4WYM A;  2FAC A;  3G4S P;  3G26 A;  3DS5 A;  3DTJ A;  2FQ0 A;  1W2B O;  1Q82 Q;  3NTE A;  1DNY A;  2JYL A;  2JAZ A;  1BAJ A;  3H47 A;  2XV6 A;  3HYB A;  3GZM A;  2N5I A;  2KG6 A;  1Q7Y Q;  2GZG A;  3G71 P;  3VRL C;  2AVA A;  3GJN A;  3H4E A;  1HQB A;  2QNW A;  2GDW A;  4PXH B;  4BPF A;  4H2W C;  1A43 A;  2FAD A;  2JU2 A;  2JBG A;  2EHT A;  4BPH A;  1RNI A;  2FVF A;  4QKO A;  3CCM P;  1IUQ A;  1YI2 P;  1VQ7 P;  3RG2 A;  5I4T G;  4XFZ A;  2MF4 A;  1NJI Q;  2BUO A;  2AFD A;  2GZJ A;  2FQ1 A;  3LRY A;  1VQK P;  1M90 Q;  2EFJ A;  2MR7 A;  3DS2 A;  2LPK A;  1GXG A;  4NEO A;  2K0D X;  2CG5 B;  2LF4 A;  2QEX P;  2LIU A;  5HGO A;  4XFX A;  4R0M A;  2VLO A;  1M6N A;  1RO2 A;  4U0F A;  3GZL A;  1A8O A;  4HKG A;  2PEI A;  2OTL P;  2AFE A;  2EG5 A;  3B5I A;  3CC2 P;  5HGN A;  2NO8 A;  2PNG A;  2ROQ A;  1KC8 Q;  4XFY A;  2LKI A;  1M1K Q;  2K2Q A;  3DS3 A;  2JYG A;  2BHV A;  5CZD B;  1VKU A;  2P9X A;  3NY7 B;  1YIT P;  4U0E A;  2L4B A;  1UJZ A;  2L6E A;  1E6J P;  1VQO P;  2KG8 A;  1BXI A;  2KGC A;  2PY8 A;  4U0A A;  2Z46 A;  1AYI A;  4XRQ A;  5HGM A;  2MVU A;  2KOQ A;  2X2B A;  4IZ6 A;  3CE7 A;  2FQ2 A;  2KR5 A;  1GXH A;  4IPY A;  3G28 A;  2KOO A;  2WPT A;  2MY5 A;  2GZF A;  2PEO A;  2K93 A;  2XXM A;  2OAR A;  1QVG O;  3CCQ P;  3CXC O;  3DS4 A;  2KOD A;  3LMO A;  5HV8 A;  3OW2 O;  2LL8 A;  2Z45 A;  2N98 A;  2L22 A;  3G1G A;  1Q86 Q;  1KLP A;  2EIA A;  2K92 A;  2XZ1 C;  4COP A;  1N8R Q;  1VQ9 P;  2K94 A;  1Z6M A;  4PH0 A;  2KGD A;  2PEK A;  5HGL A;  3CD6 P;  1UNK A;  2FVA A;  2K5X A;  3CCR P;  3M1M A;  2N50 A;  1KD1 Q;  2DNW A;  1IMQ A;  5DCK A;  1VQP P;  1RO0 A;  1AF8 A;  1FR2 A;  5EJD A;  2N6Z A;  1Q81 Q;  2N5H A;  2VLQ A;  3G0V A;  2KOR A;  2CWO A;  7CEI A;  1YHQ P;  2GZE A;  4CA3 A;  1K9M Q;  2JO0 A;  3DPH A;  1CEI A;  2VSQ A;  3E2D A;  1S72 P;  4XRO A;  2XZ0 D;  1VQ8 P;  5JPA A;  2L0Q A;  3G21 A;  3CCJ P;  3CMA P;  2JQ4 A;  2CQ8 A;  3I55 P;  5F2N A;  5HVC A;  2ONT A;  2M8N A;  1MZ8 A;  2PEJ A;  1L0I A;  2KOP A;  2FAE A;  3G6E P;  1GPJ A;  1ACP A;  1YJN P;  1VQM P;  2OTJ P;  3CCE P;  1VQL P;  1EIA A;  1L0H A;  2KOS A;  3HZQ A;  1F80 D;  3CCS P;  4QNB A;  3MGE A;  5BS2 A;  2KG9 A;  1EOQ A;  4U0D A;  2LML A;  3CCU P;  2LOL A;  5KP8 B;  4BPG A;  2ERH A;  3CC7 P;  2GYK A;  1HY8 A;  3RG6 C;  5KP7 B;  3CC4 P;  2CGQ A;  5KP6 B;  1YJW P;  2GZI A;  3EJE A;  3Q20 A;  3U43 A;  2AF8 A;  2JGP A;  4UHP B;  1VQ4 P;  1VQ6 P;  2Z44 A;  3DS1 A;  3DS0 A;  2DGY A;  5BS1 A;  4COC A;  2K0Y A;  3I56 P;  3EJD A;  2FVE A;  2KGA A;  1ZNV A;  1VQN P;  1DV5 A;  5F2O A;  1VQ5 P;  1KQS O;  1M6E X;  1OR5 A;  1ZMB A;  2QA4 P;  1NQ4 A;  2PEM A;  2KW2 A;  4U0B A;  1JJ2 O;  3H0D A;  4MRT C;  1QVF O;  2K0X A;  2MVV A; 
#chains in the Genus database with same CATH homology
 2KGC A;  4BPF A;  4H2W C;  2JQ4 A;  2FAD A;  2JU2 A;  2CQ8 A;  2MR8 A;  2KGE A;  2EHT A;  4BPH A;  5HVC A;  2FVF A;  1T8K A;  1L0I A;  2MVU A;  2KOQ A;  2KOP A;  3RG2 A;  2FAE A;  2KWL A;  2X2B A;  4IZ6 A;  1ACP A;  2MF4 A;  3CE7 A;  2MD9 A;  2JU1 A;  4PWV B;  2FQ2 A;  2KR5 A;  2AFD A;  2FQ1 A;  4DG9 A;  1L0H A;  2KOO A;  2KOS A;  2MY5 A;  2GDY A;  2MR7 A;  1F80 D;  2K93 A;  2LPK A;  4NEO A;  4H2X C;  3LMO A;  5HV8 A;  2L9F A;  2LL8 A;  2KG9 A;  2CG5 B;  2N98 A;  3EJB A;  2L22 A;  2CNR A;  2LTE A;  2EHS A;  2LIU A;  2M5R A;  2LML A;  1KLP A;  2LOL A;  4R0M A;  4H2Y C;  5KP8 B;  4BPG A;  2K92 A;  2XZ1 C;  1X3O A;  2GDX A;  3GZL A;  1HY8 A;  2K94 A;  4HKG A;  2N6Y A;  2KGD A;  5KP7 B;  2FVA A;  2CGQ A;  2LIW A;  5KP6 B;  2N50 A;  2AFE A;  2DNW A;  3EJE A;  2AF8 A;  2FHS C;  2JGP A;  2FAC A;  2PNG A;  2ROQ A;  1AF8 A;  5EJD A;  2N6Z A;  2LKI A;  2K2Q A;  2K0Y A;  2N5H A;  3EJD A;  2FQ0 A;  2FVE A;  2KOR A;  2KGA A;  1DNY A;  5CZD B;  1VKU A;  1DV5 A;  4CA3 A;  3NY7 B;  3GZM A;  2N5I A;  1OR5 A;  2KG6 A;  1NQ4 A;  2AVA A;  2KW2 A;  2L4B A;  2VSQ A;  4MRT C;  2XZ0 D;  1HQB A;  2QNW A;  2GDW A;  2KG8 A;  2L0Q A;  2K0X A;  4PXH B;  2MVV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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