2G7RA

X-ray structure of the death domain of the human mucosa associated lymphoid tissue lymphoma translocation protein 1
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
96
structure length
86
Chain Sequence
TLNRLREPLLRRLSELLDQAGWRRLAELAGLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQLLSP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Mucosa-associated lymphoid tissue lymphoma translocation pro
publication title X-ray structure of the death domain of the human mucosa associated lymphoid tissue lymphoma translocation protein 1
rcsb
source organism Homo sapiens
total genus 27
structure length 86
sequence length 96
chains with identical sequence B
ec nomenclature ec 3.4.22.-:
pdb deposition date 2006-02-28
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 2g7rA00
1WXPA 2YVIA 1YGOA 3J6JA 4IZAB 2DBGA 1WH4A 2P1HA 4M9ZA 2MS8A 1UCPA 4O9FA 4N1LA 2IB1A 4LWDA 4F42A 2G7RA 4O6XA 4EWIA 2NZ7A 3QF2A 2YGSA 2DO9A 4FH0A 3J63A 2N80A 2KN6A 4RHWA 1DGNA 2HM2Q 4DWNA 3LQQA 1E3YA 3YGSP 3EZQB 1PN5A 2B1WA 4QOBA 1ICHA 4N1KA 4D8OA 2N1FA 3YGSC 1CY5A 1E41A 2M5VA 1D2ZA 4RHWE 2BBZA 2O71A 2OF5H 3MOPA 2LS7A 2F1SA 4JUPA 4JQWA 4M9SA 3EZQA 4P4HA 1WMGA 2D96A 1C15A 4F44A 3CRDA 2NSNA 4M9XA 4NQKA 2DBDA 3T6PA 1DDFA 4I16A 2L9MA 3KATA 2OF5A 2MPCA 2NAQA 4P4HI 2LWEA 2VGQA 2YU0A 4A2WA 1Z6TA 3MOPG 4IZ7B 1N3KA 2DBHA 4O7QA 2MN4A 2N97A 2GF5A 2L6AA 2A5YB 2N7ZA 4N1JA 1A1ZA 3CL3A 1FADA 2DBFA 1A1WA 2YQFA 4IZ5E 4A2QA 4ZBWA 2N00A 4UZ0A 2KM6A 3LQRA 2MB9A 2MS7A 3MOPK 2N83A 4E9MA 1CWWA 1D2ZB 2A9IA 1NGRA 2BBRA 4O9LA 2LWDA
chains in the Genus database with same CATH superfamily
1WXPA 2YVIA 1YGOA 3J6JA 4IZAB 2DBGA 1WH4A 2P1HA 4M9ZA 2MS8A 1UCPA 4O9FA 4N1LA 2IB1A 4LWDA 4F42A 2G7RA 4O6XA 4EWIA 2NZ7A 3QF2A 2YGSA 2DO9A 4FH0A 3J63A 2N80A 2KN6A 4RHWA 1DGNA 2HM2Q 4DWNA 3LQQA 1E3YA 3YGSP 3EZQB 1PN5A 2B1WA 4QOBA 1ICHA 4N1KA 4D8OA 2N1FA 3YGSC 1CY5A 1E41A 2M5VA 1D2ZA 4RHWE 2BBZA 2O71A 2OF5H 3MOPA 2LS7A 2F1SA 4JUPA 4JQWA 2XV9A 4M9SA 3EZQA 2MJMA 4P4HA 1WMGA 2D96A 1C15A 4F44A 3CRDA 2NSNA 4M9XA 4NQKA 2DBDA 3T6PA 1DDFA 4I16A 2L9MA 3KATA 2OF5A 2MPCA 2NAQA 4P4HI 2LWEA 2VGQA 2YU0A 4A2WA 1Z6TA 3MOPG 4IZ7B 1N3KA 2DBHA 4O7QA 2MN4A 2N97A 2GF5A 2L6AA 2A5YB 2N7ZA 4N1JA 1A1ZA 3CL3A 1FADA 2DBFA 1A1WA 2YQFA 4IZ5E 4A2QA 4ZBWA 2N00A 4UZ0A 2KM6A 3LQRA 2MB9A 2MS7A 3MOPK 2N83A 4E9MA 1CWWA 1D2ZB 2A9IA 1NGRA 2BBRA 4O9LA 2LWDA
chains in the Genus database with same CATH topology
1WXPA 2YVIA 1YGOA 3J6JA 4IZAB 2DBGA 1WH4A 2P1HA 4M9ZA 2MS8A 1UCPA 4O9FA 4N1LA 2IB1A 4LWDA 4F42A 2G7RA 4O6XA 4EWIA 2NZ7A 3QF2A 2YGSA 2DO9A 4FH0A 3J63A 2N80A 2KN6A 4RHWA 1DGNA 2HM2Q 4DWNA 3LQQA 1E3YA 3YGSP 3EZQB 1PN5A 2B1WA 4QOBA 1ICHA 4N1KA 4D8OA 2N1FA 3YGSC 1CY5A 1E41A 2M5VA 1D2ZA 4RHWE 2BBZA 2O71A 2OF5H 3MOPA 2LS7A 2F1SA 4JUPA 4JQWA 2XV9A 4M9SA 3EZQA 2MJMA 4P4HA 1WMGA 2D96A 1C15A 4F44A 3CRDA 2NSNA 4M9XA 4NQKA 2DBDA 3T6PA 1DDFA 4I16A 2L9MA 3KATA 2OF5A 2MPCA 2NAQA 4P4HI 2LWEA 2VGQA 2YU0A 4A2WA 1Z6TA 3MOPG 4IZ7B 1N3KA 2DBHA 4O7QA 2MN4A 2N97A 2GF5A 2L6AA 2A5YB 2N7ZA 4N1JA 1A1ZA 3CL3A 1FADA 2DBFA 1A1WA 2YQFA 4IZ5E 4A2QA 4ZBWA 2N00A 4UZ0A 2KM6A 3LQRA 2MB9A 2MS7A 3MOPK 2N83A 4E9MA 1CWWA 1D2ZB 2A9IA 1NGRA 2BBRA 4O9LA 2LWDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WXP A;  2YVI A;  1YGO A;  3J6J A;  4IZA B;  2DBG A;  1WH4 A;  2P1H A;  4M9Z A;  2MS8 A;  1UCP A;  4O9F A;  4N1L A;  2IB1 A;  4LWD A;  4F42 A;  2G7R A;  4O6X A;  4EWI A;  2NZ7 A;  3QF2 A;  2YGS A;  2DO9 A;  4FH0 A;  3J63 A;  2N80 A;  2KN6 A;  4RHW A;  1DGN A;  2HM2 Q;  4DWN A;  3LQQ A;  1E3Y A;  3YGS P;  3EZQ B;  1PN5 A;  2B1W A;  4QOB A;  1ICH A;  4N1K A;  4D8O A;  2N1F A;  3YGS C;  1CY5 A;  1E41 A;  2M5V A;  1D2Z A;  4RHW E;  2BBZ A;  2O71 A;  2OF5 H;  3MOP A;  2LS7 A;  2F1S A;  4JUP A;  4JQW A;  4M9S A;  3EZQ A;  4P4H A;  1WMG A;  2D96 A;  1C15 A;  4F44 A;  3CRD A;  2NSN A;  4M9X A;  4NQK A;  2DBD A;  3T6P A;  1DDF A;  4I16 A;  2L9M A;  3KAT A;  2OF5 A;  2MPC A;  2NAQ A;  4P4H I;  2LWE A;  2VGQ A;  2YU0 A;  4A2W A;  1Z6T A;  3MOP G;  4IZ7 B;  1N3K A;  2DBH A;  4O7Q A;  2MN4 A;  2N97 A;  2GF5 A;  2L6A A;  2A5Y B;  2N7Z A;  4N1J A;  1A1Z A;  3CL3 A;  1FAD A;  2DBF A;  1A1W A;  2YQF A;  4IZ5 E;  4A2Q A;  4ZBW A;  2N00 A;  4UZ0 A;  2KM6 A;  3LQR A;  2MB9 A;  2MS7 A;  3MOP K;  2N83 A;  4E9M A;  1CWW A;  1D2Z B;  2A9I A;  1NGR A;  2BBR A;  4O9L A;  2LWD A; 
#chains in the Genus database with same CATH topology
 1WXP A;  2YVI A;  1YGO A;  3J6J A;  4IZA B;  2DBG A;  1WH4 A;  2P1H A;  4M9Z A;  2MS8 A;  1UCP A;  4O9F A;  4N1L A;  2IB1 A;  4LWD A;  4F42 A;  2G7R A;  4O6X A;  4EWI A;  2NZ7 A;  3QF2 A;  2YGS A;  2DO9 A;  4FH0 A;  3J63 A;  2N80 A;  2KN6 A;  4RHW A;  1DGN A;  2HM2 Q;  4DWN A;  3LQQ A;  1E3Y A;  3YGS P;  3EZQ B;  1PN5 A;  2B1W A;  4QOB A;  1ICH A;  4N1K A;  4D8O A;  2N1F A;  3YGS C;  1CY5 A;  1E41 A;  2M5V A;  1D2Z A;  4RHW E;  2BBZ A;  2O71 A;  2OF5 H;  3MOP A;  2LS7 A;  2F1S A;  4JUP A;  4JQW A;  2XV9 A;  4M9S A;  3EZQ A;  2MJM A;  4P4H A;  1WMG A;  2D96 A;  1C15 A;  4F44 A;  3CRD A;  2NSN A;  4M9X A;  4NQK A;  2DBD A;  3T6P A;  1DDF A;  4I16 A;  2L9M A;  3KAT A;  2OF5 A;  2MPC A;  2NAQ A;  4P4H I;  2LWE A;  2VGQ A;  2YU0 A;  4A2W A;  1Z6T A;  3MOP G;  4IZ7 B;  1N3K A;  2DBH A;  4O7Q A;  2MN4 A;  2N97 A;  2GF5 A;  2L6A A;  2A5Y B;  2N7Z A;  4N1J A;  1A1Z A;  3CL3 A;  1FAD A;  2DBF A;  1A1W A;  2YQF A;  4IZ5 E;  4A2Q A;  4ZBW A;  2N00 A;  4UZ0 A;  2KM6 A;  3LQR A;  2MB9 A;  2MS7 A;  3MOP K;  2N83 A;  4E9M A;  1CWW A;  1D2Z B;  2A9I A;  1NGR A;  2BBR A;  4O9L A;  2LWD A; 
#chains in the Genus database with same CATH homology
 1WXP A;  2YVI A;  1YGO A;  3J6J A;  4IZA B;  2DBG A;  1WH4 A;  2P1H A;  4M9Z A;  2MS8 A;  1UCP A;  4O9F A;  4N1L A;  2IB1 A;  4LWD A;  4F42 A;  2G7R A;  4O6X A;  4EWI A;  2NZ7 A;  3QF2 A;  2YGS A;  2DO9 A;  4FH0 A;  3J63 A;  2N80 A;  2KN6 A;  4RHW A;  1DGN A;  2HM2 Q;  4DWN A;  3LQQ A;  1E3Y A;  3YGS P;  3EZQ B;  1PN5 A;  2B1W A;  4QOB A;  1ICH A;  4N1K A;  4D8O A;  2N1F A;  3YGS C;  1CY5 A;  1E41 A;  2M5V A;  1D2Z A;  4RHW E;  2BBZ A;  2O71 A;  2OF5 H;  3MOP A;  2LS7 A;  2F1S A;  4JUP A;  4JQW A;  2XV9 A;  4M9S A;  3EZQ A;  2MJM A;  4P4H A;  1WMG A;  2D96 A;  1C15 A;  4F44 A;  3CRD A;  2NSN A;  4M9X A;  4NQK A;  2DBD A;  3T6P A;  1DDF A;  4I16 A;  2L9M A;  3KAT A;  2OF5 A;  2MPC A;  2NAQ A;  4P4H I;  2LWE A;  2VGQ A;  2YU0 A;  4A2W A;  1Z6T A;  3MOP G;  4IZ7 B;  1N3K A;  2DBH A;  4O7Q A;  2MN4 A;  2N97 A;  2GF5 A;  2L6A A;  2A5Y B;  2N7Z A;  4N1J A;  1A1Z A;  3CL3 A;  1FAD A;  2DBF A;  1A1W A;  2YQF A;  4IZ5 E;  4A2Q A;  4ZBW A;  2N00 A;  4UZ0 A;  2KM6 A;  3LQR A;  2MB9 A;  2MS7 A;  3MOP K;  2N83 A;  4E9M A;  1CWW A;  1D2Z B;  2A9I A;  1NGR A;  2BBR A;  4O9L A;  2LWD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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