2GKTI

Crystal structure of the p14'-ala32 variant of the n-terminally truncated omtky3-del(1-5)
Total Genus 13
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTLEYRPLCGSDNKTYANKCNFCNAVVESNGTLTLSHFGKC
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Hydrolase inhibitor
molecule keywords Ovomucoid
publication title Structural Insights into the Non-additivity Effects in the Sequence-to-Reactivity Algorithm for Serine Peptidases and their Inhibitors.
pubmed doi rcsb
source organism Meleagris gallopavo
total genus 13
structure length 51
sequence length 51
ec nomenclature
pdb deposition date 2006-04-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2gktI00
1AN1I 2KCXA 2NU1I 5DAEA 2ERWA 2LEOA 2N17A 1LR9A 3QTLD 1SGYI 1NUBA 1LR8A 5JHWC 1LR7A 1DS3I 3B4VC 1OMUA 1TBRR 2F3CI 1Y1CA 2BUSA 1IY6A 3SGQI 1YTPA 2B0UC 2KMOA 1CGII 1YU6C 1FYBA 1CHOI 1CT2I 1HPTA 2SGPI 3HH2C 2NU3I 1CT4I 2GKRI 1UVFA 2KMRA 3TJQA 4HGUA 3SEKC 1N13A 1HDLA 2KMQA 2QQCA 2M5XA 1IY5A 1SGEI 1OYVI 1SGDI 4GI3C 2N71A 1UVGA 2NU4I 3OVOA 2JYYA 2N52A 1PJUA 2WCYA 2NU2I 1CT0I 1KMAA 1BMOA 3SGBI 2SGEI 2V53A 2QQDA 2P6AC 2NU0I 1H0ZA 2ARPF 1TBQR 1CGJI 1Y1BA 2GKTI 1PCEA 2SGDI 1Z7KB 2XRCA 1PPFI 1MT1A 1SGRI 2OVOA 2SGQI 1HJAI 1M8CA 2JXDA 2GKVA 1DS2I 1OMTA 1SGQI 1IW4A 2SGFI 2KMPA 1SGPI 2JZMA 1CE3A 1M8BA 1BUSA 1TUSA 1R0RI 1OVOA 1TGSI 4OVOA 1SGNI 1CSOI 4SGBI 1TURA 1TIHA 1UUCA
chains in the Genus database with same CATH superfamily
1AN1I 3TO9A 3R5CA 2YQPA 5FUYA 1WKXA 3FSXA 2KCXA 1MJ9A 2NU1I 1V1HA 2VRWB 2ERWA 3R5DA 5DAEA 2LEOA 1V1IA 4JCVE 1W4RA 2N17A 1LR9A 3QTLD 1SGYI 1NUBA 4E1PA 1MJBA 1LR8A 1XX6A 2J9RA 2WGCA 2CWGA 5CCMA 5JHWC 2X3TA 3E2IA 3KY9A 1LR7A 1WGCA 2DIPA 3OXFA 2PQ8A 2V1CC 3R5BA 1DS3I 3B4VC 2K9HA 2X52A 1OMUA 2JW6A 3QAHA 3E59A 2OU2A 3UGDA 1TBRR 2UZ3A 2F3CI 1Y1CA 2Y0MA 1PTRA 2BUSA 5HQ8A 3R5AA 2CWFA 1KBEA 1UHAA 1ULKA 1IY6A 3SGQI 1YTPA 2B0UC 2KMOA 2W0TA 4FKDA 2CWHA 1CGII 1YU6C 2UVOA 3OXGA 1CHOI 3UGIA 1FYBA 1Q9BA 3UGLA 1CT2I 5E3PA 1WGTA 1HPTA 2OD1A 1VDDA 5EX0A 1MJAA 2SGPI 2ENZA 3HH2C 2NU3I 1CT4I 2GKRI 1XBTA 3RU0A 4L9MA 2ELIA 4UXIA 1UVFA 2KMRA 2LB7A 3MEKA 4HGUA 3TJQA 7WGAA 2V1CA 3SEKC 5E3QA 2ORWA 1N13A 2FNFX 1HDLA 1ULNA 2KMQA 3PDNA 2OZUA 3UEJA 1XA6A 1X4SA 4E1RA 3D00A 2QQCA 2M5XA 3UFFA 4A24A 3UEYA 5FUWA 1IY5A 1WTJA 2QQEA 2L8EA 3BJIA 4MPIA 1SGEI 1FARA 1OYVI 1SGDI 1ULMA 2DB6A 2N71A 4GI3C 1P9GA 1UVGA 2NU4I 3OVOA 2JYYA 2N52A 1PJUA 2WCYA 3TOAA 2NU2I 1CT0I 2DKVA 4UXJA 1KMAA 1TBNA 2CJSC 1Z2IA 1BMOA 5HI7A 1TBOA 3SGBI 1K7TA 2B8TA 2ORVA 1PTQA 2J87A 2QPOA 2YUUA 2SGEI 3FSYA 4B6DA 4DNCA 1X74A 2V53A 4AMLA 1P9ZA 2QQDA 1FY7A 2WVJA 1HEVA 2P6AC 2NU0I 4WP4A 5J8CA 2ROWA 1H0ZA 2LUYA 5EX3A 2QQ0A 1NXUA 2ARPF 2ENNA 2L7XA 1TBQR 1CGJI 1Y1BA 2ODDA 2GKTI 1PCEA 2N1AB 2SGDI 3VE5A 1FAQA 2E5RA 3TOBA 1Z7KB 3TO6A 2XRCA 1PPFI 1U5KA 4UXHA 2A20A 1MT1A 1RFHA 1S20A 3VDPA 1SGRI 1R79A 2RC4A 2OVOA 1W3SA 5CCLA 2SGQI 1HJAI 1KBFA 1M8CA 2JXDA 1K7UA 3FC3A 2GKVA 1DS2I 1OMTA 3OXLA 3GOXA 1SGQI 9WGAA 1IW4A 2SGFI 3VDUA 2KMPA 1SGPI 5FUXA 2JZMA 1CE3A 1TOTA 3CXLA 1K7VA 1M8BA 3OL0A 3QWPA 1TUSA 1BUSA 1Y8FA 5E3RA 1R0RI 1OVOA 1TGSI 4OVOA 5FUVA 5J8FA 3UOEA 2GVIA 1SGNI 2GIVA 3TO7A 1CSOI 2JA1A 2RIJA 2E73A 4SGBI 1TURA 1TIHA 1UUCA
chains in the Genus database with same CATH topology
1AN1I 2YQPA 5FUYA 2KCXA 2NU1I 1V1HA 2VRWB 2ERWA 5DAEA 2LEOA 1V1IA 4JCVE 1W4RA 2N17A 1LR9A 3QTLD 1SGYI 1NUBA 4E1PA 2J9RA 1LR8A 1XX6A 5CCMA 5JHWC 3E2IA 3KY9A 3OXFA 1LR7A 2DIPA 2V1CC 1DS3I 3B4VC 2K9HA 1OMUA 2JW6A 3E59A 3UGDA 1TBRR 2UZ3A 2F3CI 1Y1CA 5HQ8A 1PTRA 2BUSA 1KBEA 1IY6A 3SGQI 1YTPA 2B0UC 2KMOA 2W0TA 4FKDA 1CGII 1YU6C 3OXGA 1FYBA 1CHOI 3UGIA 3UGLA 1CT2I 1HPTA 2OD1A 1VDDA 5EX0A 2SGPI 2ENZA 3HH2C 2NU3I 1CT4I 2GKRI 1XBTA 3RU0A 4L9MA 2ELIA 4UXIA 1UVFA 2KMRA 3MEKA 3TJQA 4HGUA 2V1CA 3SEKC 2ORWA 1N13A 2FNFX 1HDLA 2KMQA 3PDNA 3UEJA 1XA6A 1X4SA 4E1RA 3D00A 2QQCA 2M5XA 3UFFA 4A24A 3UEYA 5FUWA 1IY5A 2QQEA 2L8EA 3BJIA 1SGEI 1FARA 1OYVI 1SGDI 2DB6A 4GI3C 2N71A 1UVGA 2NU4I 3OVOA 2JYYA 2N52A 1PJUA 2WCYA 2NU2I 1CT0I 4UXJA 1KMAA 1TBNA 2CJSC 5HI7A 1BMOA 1TBOA 3SGBI 2B8TA 2ORVA 1PTQA 2J87A 2QPOA 2YUUA 2SGEI 4B6DA 1X74A 2V53A 2QQDA 2WVJA 2P6AC 2NU0I 2ROWA 1H0ZA 2LUYA 5EX3A 2QQ0A 2ENNA 2ARPF 2L7XA 1TBQR 1CGJI 1Y1BA 2ODDA 2GKTI 1PCEA 2N1AB 2SGDI 3VE5A 1FAQA 2E5RA 1Z7KB 2XRCA 1PPFI 1U5KA 4UXHA 2A20A 1MT1A 1RFHA 3VDPA 1SGRI 1R79A 2OVOA 1W3SA 5CCLA 2SGQI 1HJAI 1KBFA 1M8CA 2JXDA 3FC3A 2GKVA 1DS2I 1OMTA 3OXLA 3GOXA 1SGQI 1IW4A 2SGFI 3VDUA 2KMPA 1SGPI 5FUXA 2JZMA 1CE3A 1TOTA 3CXLA 1M8BA 3OL0A 3QWPA 1TUSA 1BUSA 1Y8FA 1R0RI 1OVOA 1TGSI 4OVOA 5FUVA 2GVIA 1SGNI 1CSOI 2JA1A 2E73A 4SGBI 1TURA 1TIHA 1UUCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1AN1 I;  2KCX A;  2NU1 I;  5DAE A;  2ERW A;  2LEO A;  2N17 A;  1LR9 A;  3QTL D;  1SGY I;  1NUB A;  1LR8 A;  5JHW C;  1LR7 A;  1DS3 I;  3B4V C;  1OMU A;  1TBR R;  2F3C I;  1Y1C A;  2BUS A;  1IY6 A;  3SGQ I;  1YTP A;  2B0U C;  2KMO A;  1CGI I;  1YU6 C;  1FYB A;  1CHO I;  1CT2 I;  1HPT A;  2SGP I;  3HH2 C;  2NU3 I;  1CT4 I;  2GKR I;  1UVF A;  2KMR A;  3TJQ A;  4HGU A;  3SEK C;  1N13 A;  1HDL A;  2KMQ A;  2QQC A;  2M5X A;  1IY5 A;  1SGE I;  1OYV I;  1SGD I;  4GI3 C;  2N71 A;  1UVG A;  2NU4 I;  3OVO A;  2JYY A;  2N52 A;  1PJU A;  2WCY A;  2NU2 I;  1CT0 I;  1KMA A;  1BMO A;  3SGB I;  2SGE I;  2V53 A;  2QQD A;  2P6A C;  2NU0 I;  1H0Z A;  2ARP F;  1TBQ R;  1CGJ I;  1Y1B A;  2GKT I;  1PCE A;  2SGD I;  1Z7K B;  2XRC A;  1PPF I;  1MT1 A;  1SGR I;  2OVO A;  2SGQ I;  1HJA I;  1M8C A;  2JXD A;  2GKV A;  1DS2 I;  1OMT A;  1SGQ I;  1IW4 A;  2SGF I;  2KMP A;  1SGP I;  2JZM A;  1CE3 A;  1M8B A;  1BUS A;  1TUS A;  1R0R I;  1OVO A;  1TGS I;  4OVO A;  1SGN I;  1CSO I;  4SGB I;  1TUR A;  1TIH A;  1UUC A; 
#chains in the Genus database with same CATH topology
 1AN1 I;  3TO9 A;  3R5C A;  2YQP A;  5FUY A;  1WKX A;  3FSX A;  2KCX A;  1MJ9 A;  2NU1 I;  1V1H A;  2VRW B;  2ERW A;  3R5D A;  5DAE A;  2LEO A;  1V1I A;  4JCV E;  1W4R A;  2N17 A;  1LR9 A;  3QTL D;  1SGY I;  1NUB A;  4E1P A;  1MJB A;  1LR8 A;  1XX6 A;  2J9R A;  2WGC A;  2CWG A;  5CCM A;  5JHW C;  2X3T A;  3E2I A;  3KY9 A;  1LR7 A;  1WGC A;  2DIP A;  3OXF A;  2PQ8 A;  2V1C C;  3R5B A;  1DS3 I;  3B4V C;  2K9H A;  2X52 A;  1OMU A;  2JW6 A;  3QAH A;  3E59 A;  2OU2 A;  3UGD A;  1TBR R;  2UZ3 A;  2F3C I;  1Y1C A;  2Y0M A;  1PTR A;  2BUS A;  5HQ8 A;  3R5A A;  2CWF A;  1KBE A;  1UHA A;  1ULK A;  1IY6 A;  3SGQ I;  1YTP A;  2B0U C;  2KMO A;  2W0T A;  4FKD A;  2CWH A;  1CGI I;  1YU6 C;  2UVO A;  3OXG A;  1CHO I;  3UGI A;  1FYB A;  1Q9B A;  3UGL A;  1CT2 I;  5E3P A;  1WGT A;  1HPT A;  2OD1 A;  1VDD A;  5EX0 A;  1MJA A;  2SGP I;  2ENZ A;  3HH2 C;  2NU3 I;  1CT4 I;  2GKR I;  1XBT A;  3RU0 A;  4L9M A;  2ELI A;  4UXI A;  1UVF A;  2KMR A;  2LB7 A;  3MEK A;  4HGU A;  3TJQ A;  7WGA A;  2V1C A;  3SEK C;  5E3Q A;  2ORW A;  1N13 A;  2FNF X;  1HDL A;  1ULN A;  2KMQ A;  3PDN A;  2OZU A;  3UEJ A;  1XA6 A;  1X4S A;  4E1R A;  3D00 A;  2QQC A;  2M5X A;  3UFF A;  4A24 A;  3UEY A;  5FUW A;  1IY5 A;  1WTJ A;  2QQE A;  2L8E A;  3BJI A;  4MPI A;  1SGE I;  1FAR A;  1OYV I;  1SGD I;  1ULM A;  2DB6 A;  2N71 A;  4GI3 C;  1P9G A;  1UVG A;  2NU4 I;  3OVO A;  2JYY A;  2N52 A;  1PJU A;  2WCY A;  3TOA A;  2NU2 I;  1CT0 I;  2DKV A;  4UXJ A;  1KMA A;  1TBN A;  2CJS C;  1Z2I A;  1BMO A;  5HI7 A;  1TBO A;  3SGB I;  1K7T A;  2B8T A;  2ORV A;  1PTQ A;  2J87 A;  2QPO A;  2YUU A;  2SGE I;  3FSY A;  4B6D A;  4DNC A;  1X74 A;  2V53 A;  4AML A;  1P9Z A;  2QQD A;  1FY7 A;  2WVJ A;  1HEV A;  2P6A C;  2NU0 I;  4WP4 A;  5J8C A;  2ROW A;  1H0Z A;  2LUY A;  5EX3 A;  2QQ0 A;  1NXU A;  2ARP F;  2ENN A;  2L7X A;  1TBQ R;  1CGJ I;  1Y1B A;  2ODD A;  2GKT I;  1PCE A;  2N1A B;  2SGD I;  3VE5 A;  1FAQ A;  2E5R A;  3TOB A;  1Z7K B;  3TO6 A;  2XRC A;  1PPF I;  1U5K A;  4UXH A;  2A20 A;  1MT1 A;  1RFH A;  1S20 A;  3VDP A;  1SGR I;  1R79 A;  2RC4 A;  2OVO A;  1W3S A;  5CCL A;  2SGQ I;  1HJA I;  1KBF A;  1M8C A;  2JXD A;  1K7U A;  3FC3 A;  2GKV A;  1DS2 I;  1OMT A;  3OXL A;  3GOX A;  1SGQ I;  9WGA A;  1IW4 A;  2SGF I;  3VDU A;  2KMP A;  1SGP I;  5FUX A;  2JZM A;  1CE3 A;  1TOT A;  3CXL A;  1K7V A;  1M8B A;  3OL0 A;  3QWP A;  1TUS A;  1BUS A;  1Y8F A;  5E3R A;  1R0R I;  1OVO A;  1TGS I;  4OVO A;  5FUV A;  5J8F A;  3UOE A;  2GVI A;  1SGN I;  2GIV A;  3TO7 A;  1CSO I;  2JA1 A;  2RIJ A;  2E73 A;  4SGB I;  1TUR A;  1TIH A;  1UUC A; 
#chains in the Genus database with same CATH homology
 1AN1 I;  2YQP A;  5FUY A;  2KCX A;  2NU1 I;  1V1H A;  2VRW B;  2ERW A;  5DAE A;  2LEO A;  1V1I A;  4JCV E;  1W4R A;  2N17 A;  1LR9 A;  3QTL D;  1SGY I;  1NUB A;  4E1P A;  2J9R A;  1LR8 A;  1XX6 A;  5CCM A;  5JHW C;  3E2I A;  3KY9 A;  3OXF A;  1LR7 A;  2DIP A;  2V1C C;  1DS3 I;  3B4V C;  2K9H A;  1OMU A;  2JW6 A;  3E59 A;  3UGD A;  1TBR R;  2UZ3 A;  2F3C I;  1Y1C A;  5HQ8 A;  1PTR A;  2BUS A;  1KBE A;  1IY6 A;  3SGQ I;  1YTP A;  2B0U C;  2KMO A;  2W0T A;  4FKD A;  1CGI I;  1YU6 C;  3OXG A;  1FYB A;  1CHO I;  3UGI A;  3UGL A;  1CT2 I;  1HPT A;  2OD1 A;  1VDD A;  5EX0 A;  2SGP I;  2ENZ A;  3HH2 C;  2NU3 I;  1CT4 I;  2GKR I;  1XBT A;  3RU0 A;  4L9M A;  2ELI A;  4UXI A;  1UVF A;  2KMR A;  3MEK A;  3TJQ A;  4HGU A;  2V1C A;  3SEK C;  2ORW A;  1N13 A;  2FNF X;  1HDL A;  2KMQ A;  3PDN A;  3UEJ A;  1XA6 A;  1X4S A;  4E1R A;  3D00 A;  2QQC A;  2M5X A;  3UFF A;  4A24 A;  3UEY A;  5FUW A;  1IY5 A;  2QQE A;  2L8E A;  3BJI A;  1SGE I;  1FAR A;  1OYV I;  1SGD I;  2DB6 A;  4GI3 C;  2N71 A;  1UVG A;  2NU4 I;  3OVO A;  2JYY A;  2N52 A;  1PJU A;  2WCY A;  2NU2 I;  1CT0 I;  4UXJ A;  1KMA A;  1TBN A;  2CJS C;  5HI7 A;  1BMO A;  1TBO A;  3SGB I;  2B8T A;  2ORV A;  1PTQ A;  2J87 A;  2QPO A;  2YUU A;  2SGE I;  4B6D A;  1X74 A;  2V53 A;  2QQD A;  2WVJ A;  2P6A C;  2NU0 I;  2ROW A;  1H0Z A;  2LUY A;  5EX3 A;  2QQ0 A;  2ENN A;  2ARP F;  2L7X A;  1TBQ R;  1CGJ I;  1Y1B A;  2ODD A;  2GKT I;  1PCE A;  2N1A B;  2SGD I;  3VE5 A;  1FAQ A;  2E5R A;  1Z7K B;  2XRC A;  1PPF I;  1U5K A;  4UXH A;  2A20 A;  1MT1 A;  1RFH A;  3VDP A;  1SGR I;  1R79 A;  2OVO A;  1W3S A;  5CCL A;  2SGQ I;  1HJA I;  1KBF A;  1M8C A;  2JXD A;  3FC3 A;  2GKV A;  1DS2 I;  1OMT A;  3OXL A;  3GOX A;  1SGQ I;  1IW4 A;  2SGF I;  3VDU A;  2KMP A;  1SGP I;  5FUX A;  2JZM A;  1CE3 A;  1TOT A;  3CXL A;  1M8B A;  3OL0 A;  3QWP A;  1TUS A;  1BUS A;  1Y8F A;  1R0R I;  1OVO A;  1TGS I;  4OVO A;  5FUV A;  2GVI A;  1SGN I;  1CSO I;  2JA1 A;  2E73 A;  4SGB I;  1TUR A;  1TIH A;  1UUC A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...