2IFYA

Structure of bacillus anthracis cofactor-independent phosphoglucerate mutase
Total Genus 156
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
156
Knots found
sequence length
508
structure length
508
Chain Sequence
RKPTALIILDGFGLREETYGNAVAQAKKPNFDGYWNKFPHTTLTACGEAVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFDKNETFQSAIKSVKEKGTALHLFGLLSDGGVHSHMNHMFALLRLAAKEGVEKVYIHAFLDGRDVGPKTAQSYIDATNEVIKETGVGQFATISGRYYSMDRDKRWDRVEKCYRAMVNGEGPTYKSAEECVEDSYANGIYDEFVLPSVIVNEDNTPVATINDDDAVIFYNFRPDRAIQIARVFTNGDFREFDRGEKVPHIPEFVCMTHFSETVDGYVAFKPMNLDNTLGEVVAQAGLKQLRIAETEKYPHVTFFFSGGREAEFPGEERILINSPKVATYDLKPEMSIYEVTDALVNEIENDKHDVIILNFANCDMVGHSGMMEPTIKAVEATDECLGKVVEAILAKDGVALITADHGNADEELTSEGEPMTAHTTNPVPFIVTKNDVELREDGILGDIAPTMLTLLGVEQPKEMTGKTIIK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Isomerase
molecule keywords 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
publication title Structure and Molecular Mechanism of Bacillus anthracis Cofactor-Independent Phosphoglycerate Mutase: A Crucial Enzyme for Spores and Growing Cells of Bacillus Species.
pubmed doi rcsb
source organism Bacillus anthracis
total genus 156
structure length 508
sequence length 508
other databases KnotProt 2.0: S +31
ec nomenclature ec 5.4.2.12: Phosphoglycerate mutase (2,3-diphosphoglycerate-independent).
pdb deposition date 2006-09-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01676 Metalloenzyme Metalloenzyme superfamily
A PF06415 iPGM_N BPG-independent PGAM N-terminus (iPGM_N)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 2ifyA01
3.40.1450.10 Alpha Beta 3-Layer(aba) Sandwich 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain BPG-independent phosphoglycerate mutase, domain B 2ifyA02
4NWJA 4NWXA 5LIAA 3CMRA 1KH7A 1E2SP 1EI6A 3NKRA 4FDJA 2IUCB 4B56A 3TG0A 3WAYA 1ALJA 3DYCA 4UPHA 1AUKA 5GOVA 3MK0A 1N2LA 2ZKTA 1E33P 3T01A 1N2KA 4LR9A 1ZEDA 4UOPA 4ZGAA 3DPCA 1AJBA 4ZG7A 5C66A 4UPIA 2XRGA 3UN3A 3Q3QA 3M7VA 2W5TA 4TN0A 3M8YA 3NKQA 1B8JA 5IJSA 1KHKA 5DLWA 3BDFA 3IGYB 1O99A 4CYRA 4LQYA 1ALKA 3UN5A 2GSUA 5LQQA 4KAVA 2W5WA 3A52A 4LREA 2X98A 1E1ZP 1EW9A 2GSOA 3UO0A 4CXKA 1E3CP 3IDDA 4GTWA 4UOOA 5KXAA 1SHNA 2ANHA 4N7TA 1P49A 1EJJA 4LR2A 1EQJA 1SHQA 3BDHA 5DLTA 3TWZA 3UNYA 4LRAA 2QZUA 3NKNA 4KAYA 2W5QA 3TX0A 1KHNA 3NKOA 4LRCA 3WAWA 4ZG9A 1ED8A 2RH6A 4MHXA 1ANJA 1ZEFA 3SZYA 5K4PA 4KM4A 4MIVA 3NVLA 4LR7A 5LRNA 1HDHA 3NKMA 1URAA 1ZEBA 2W5VA 1FSUA 3ED4A 3LXQA 4KJDA 4QAXA 3E2DA 1HQAA 2W5SA 3UN2A 1EW2A 5AJ9A 1KH4A 3SZZA 1ED9A 1KH5A 2XR9A 5EGEA 2W5XA 3WAVA 3MK1A 4GTXA 1ALHA 2W8DA 2GLQA 5L0EA 5GRRA 1AJCA 1AJDA 3IGZB 3T00A 3NKPA 4UPKA 1ELYA 4MY4A 2GA3A 4CYSA 1ALIA 5EGHA 2W5RA 2W8SA 3M8ZA 1EW8A 1O98A 4LRBA 4CXSA 2G9YA 1Y7AA 3WBHA 5LRMA 5INHA 2IFYA 4KJGA 4LRDA 4UPLA 1AJAA 3M8WA 5IJQA 5L0BA 1KHLA 3BDGA 1HJKA 4ZG6A 1Y6VA 4CXUA 1KHJA 5DLVA 1ELZA 3WAXA 4LRFA 4FDIA 1KH9A 2GSNA 2VQRA 3MK2A 3OT9A 3B5QA 3KD8A 4UORA 5L0KA 3BDGB 4LR8A 4GTZA 3T02A 1URBA 5HRTA 5TJ3A 4GTYA 1ELXA 2IUCA 4YR1A 1ANIA 1K7HA 2D1GA
chains in the Genus database with same CATH superfamily
4NWJA 4NWXA 5LIAA 3CMRA 1KH7A 1E2SP 1EI6A 3NKRA 4FDJA 2IUCB 4B56A 3TG0A 3WAYA 1ALJA 3DYCA 4UPHA 1AUKA 5GOVA 3MK0A 1N2LA 2ZKTA 1E33P 3T01A 1N2KA 4LR9A 1ZEDA 4UOPA 4ZGAA 3DPCA 1AJBA 4ZG7A 5C66A 4UPIA 2XRGA 3UN3A 3Q3QA 3M7VA 2W5TA 4TN0A 3M8YA 3NKQA 1B8JA 5IJSA 1KHKA 5DLWA 3BDFA 3IGYB 1O99A 4CYRA 4LQYA 1ALKA 3UN5A 2GSUA 5LQQA 4KAVA 2W5WA 3A52A 4LREA 2X98A 1E1ZP 1EW9A 2GSOA 3UO0A 4CXKA 1E3CP 3IDDA 4GTWA 4UOOA 5KXAA 1SHNA 2ANHA 4N7TA 1P49A 1EJJA 4LR2A 1EQJA 1SHQA 3BDHA 5DLTA 3TWZA 3UNYA 4LRAA 2QZUA 3NKNA 4KAYA 2W5QA 3TX0A 1KHNA 3NKOA 4LRCA 3WAWA 4ZG9A 1ED8A 2RH6A 4MHXA 1ANJA 1ZEFA 3SZYA 5K4PA 4KM4A 4MIVA 3NVLA 4LR7A 5LRNA 1HDHA 3NKMA 1URAA 1ZEBA 2W5VA 1FSUA 3ED4A 3LXQA 4KJDA 4QAXA 3E2DA 1HQAA 2W5SA 3UN2A 1EW2A 5AJ9A 1KH4A 3SZZA 1ED9A 1KH5A 2XR9A 5EGEA 2W5XA 3WAVA 3MK1A 4GTXA 1ALHA 2W8DA 2GLQA 5L0EA 5GRRA 1AJCA 1AJDA 3IGZB 3T00A 3NKPA 4UPKA 1ELYA 4MY4A 2GA3A 4CYSA 1ALIA 5EGHA 2W5RA 2W8SA 3M8ZA 1EW8A 1O98A 4LRBA 4CXSA 2G9YA 1Y7AA 3WBHA 5LRMA 5INHA 2IFYA 4KJGA 4LRDA 4UPLA 1AJAA 3M8WA 5IJQA 5L0BA 1KHLA 3BDGA 1HJKA 4ZG6A 1Y6VA 4CXUA 1KHJA 5DLVA 1ELZA 3WAXA 4LRFA 4FDIA 1KH9A 2GSNA 2VQRA 3MK2A 3OT9A 3B5QA 3KD8A 4UORA 5L0KA 3BDGB 4LR8A 4GTZA 3T02A 1URBA 5HRTA 5TJ3A 4GTYA 1ELXA 2IUCA 4YR1A 1ANIA 1K7HA 2D1GA
chains in the Genus database with same CATH topology
4NWJA 4NWXA 5LIAA 3CMRA 1KH7A 1E2SP 1EI6A 3NKRA 4FDJA 2IUCB 4B56A 3TG0A 3WAYA 1ALJA 3DYCA 4UPHA 1AUKA 5GOVA 3MK0A 1N2LA 2ZKTA 1E33P 3T01A 1N2KA 4LR9A 1ZEDA 4UOPA 4ZGAA 3DPCA 1AJBA 4ZG7A 5C66A 4UPIA 2XRGA 3UN3A 3Q3QA 3M7VA 2W5TA 4TN0A 3M8YA 3NKQA 1B8JA 5IJSA 1KHKA 5DLWA 3BDFA 3IGYB 1O99A 4CYRA 4LQYA 1ALKA 3UN5A 2GSUA 5LQQA 4KAVA 2W5WA 3A52A 4LREA 2X98A 1E1ZP 1EW9A 2GSOA 3UO0A 4CXKA 1E3CP 3IDDA 4GTWA 4UOOA 5KXAA 1SHNA 2ANHA 4N7TA 1P49A 1EJJA 4LR2A 1EQJA 1SHQA 3BDHA 5DLTA 3TWZA 3UNYA 4LRAA 2QZUA 3NKNA 4KAYA 2W5QA 3TX0A 1KHNA 3NKOA 4LRCA 3WAWA 4ZG9A 1ED8A 2RH6A 4MHXA 1ANJA 1ZEFA 3SZYA 5K4PA 4KM4A 4MIVA 3NVLA 4LR7A 5LRNA 1HDHA 3NKMA 1URAA 1ZEBA 2W5VA 1FSUA 3ED4A 3LXQA 4KJDA 4QAXA 3E2DA 1HQAA 2W5SA 3UN2A 1EW2A 5AJ9A 1KH4A 3SZZA 1ED9A 1KH5A 2XR9A 5EGEA 2W5XA 3WAVA 3MK1A 4GTXA 1ALHA 2W8DA 2GLQA 5L0EA 5GRRA 1AJCA 1AJDA 3IGZB 3T00A 3NKPA 4UPKA 1ELYA 4MY4A 2GA3A 4CYSA 1ALIA 5EGHA 2W5RA 2W8SA 3M8ZA 1EW8A 1O98A 4LRBA 4CXSA 2G9YA 1Y7AA 3WBHA 5LRMA 5INHA 2IFYA 4KJGA 4LRDA 4UPLA 1AJAA 3M8WA 5IJQA 5L0BA 1KHLA 3BDGA 1HJKA 4ZG6A 1Y6VA 4CXUA 1KHJA 5DLVA 1ELZA 3WAXA 4LRFA 4FDIA 1KH9A 2GSNA 2VQRA 3MK2A 3OT9A 3B5QA 3KD8A 4UORA 5L0KA 3BDGB 4LR8A 4GTZA 3T02A 1URBA 5HRTA 5TJ3A 4GTYA 1ELXA 2IUCA 4YR1A 1ANIA 1K7HA 2D1GA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4NWJ A;  4NWX A;  5LIA A;  3CMR A;  1KH7 A;  1E2S P;  1EI6 A;  3NKR A;  4FDJ A;  2IUC B;  4B56 A;  3TG0 A;  3WAY A;  1ALJ A;  3DYC A;  4UPH A;  1AUK A;  5GOV A;  3MK0 A;  1N2L A;  2ZKT A;  1E33 P;  3T01 A;  1N2K A;  4LR9 A;  1ZED A;  4UOP A;  4ZGA A;  3DPC A;  1AJB A;  4ZG7 A;  5C66 A;  4UPI A;  2XRG A;  3UN3 A;  3Q3Q A;  3M7V A;  2W5T A;  4TN0 A;  3M8Y A;  3NKQ A;  1B8J A;  5IJS A;  1KHK A;  5DLW A;  3BDF A;  3IGY B;  1O99 A;  4CYR A;  4LQY A;  1ALK A;  3UN5 A;  2GSU A;  5LQQ A;  4KAV A;  2W5W A;  3A52 A;  4LRE A;  2X98 A;  1E1Z P;  1EW9 A;  2GSO A;  3UO0 A;  4CXK A;  1E3C P;  3IDD A;  4GTW A;  4UOO A;  5KXA A;  1SHN A;  2ANH A;  4N7T A;  1P49 A;  1EJJ A;  4LR2 A;  1EQJ A;  1SHQ A;  3BDH A;  5DLT A;  3TWZ A;  3UNY A;  4LRA A;  2QZU A;  3NKN A;  4KAY A;  2W5Q A;  3TX0 A;  1KHN A;  3NKO A;  4LRC A;  3WAW A;  4ZG9 A;  1ED8 A;  2RH6 A;  4MHX A;  1ANJ A;  1ZEF A;  3SZY A;  5K4P A;  4KM4 A;  4MIV A;  3NVL A;  4LR7 A;  5LRN A;  1HDH A;  3NKM A;  1URA A;  1ZEB A;  2W5V A;  1FSU A;  3ED4 A;  3LXQ A;  4KJD A;  4QAX A;  3E2D A;  1HQA A;  2W5S A;  3UN2 A;  1EW2 A;  5AJ9 A;  1KH4 A;  3SZZ A;  1ED9 A;  1KH5 A;  2XR9 A;  5EGE A;  2W5X A;  3WAV A;  3MK1 A;  4GTX A;  1ALH A;  2W8D A;  2GLQ A;  5L0E A;  5GRR A;  1AJC A;  1AJD A;  3IGZ B;  3T00 A;  3NKP A;  4UPK A;  1ELY A;  4MY4 A;  2GA3 A;  4CYS A;  1ALI A;  5EGH A;  2W5R A;  2W8S A;  3M8Z A;  1EW8 A;  1O98 A;  4LRB A;  4CXS A;  2G9Y A;  1Y7A A;  3WBH A;  5LRM A;  5INH A;  2IFY A;  4KJG A;  4LRD A;  4UPL A;  1AJA A;  3M8W A;  5IJQ A;  5L0B A;  1KHL A;  3BDG A;  1HJK A;  4ZG6 A;  1Y6V A;  4CXU A;  1KHJ A;  5DLV A;  1ELZ A;  3WAX A;  4LRF A;  4FDI A;  1KH9 A;  2GSN A;  2VQR A;  3MK2 A;  3OT9 A;  3B5Q A;  3KD8 A;  4UOR A;  5L0K A;  3BDG B;  4LR8 A;  4GTZ A;  3T02 A;  1URB A;  5HRT A;  5TJ3 A;  4GTY A;  1ELX A;  2IUC A;  4YR1 A;  1ANI A;  1K7H A;  2D1G A; 
#chains in the Genus database with same CATH topology
 4NWJ A;  4NWX A;  5LIA A;  3CMR A;  1KH7 A;  1E2S P;  1EI6 A;  3NKR A;  4FDJ A;  2IUC B;  4B56 A;  3TG0 A;  3WAY A;  1ALJ A;  3DYC A;  4UPH A;  1AUK A;  5GOV A;  3MK0 A;  1N2L A;  2ZKT A;  1E33 P;  3T01 A;  1N2K A;  4LR9 A;  1ZED A;  4UOP A;  4ZGA A;  3DPC A;  1AJB A;  4ZG7 A;  5C66 A;  4UPI A;  2XRG A;  3UN3 A;  3Q3Q A;  3M7V A;  2W5T A;  4TN0 A;  3M8Y A;  3NKQ A;  1B8J A;  5IJS A;  1KHK A;  5DLW A;  3BDF A;  3IGY B;  1O99 A;  4CYR A;  4LQY A;  1ALK A;  3UN5 A;  2GSU A;  5LQQ A;  4KAV A;  2W5W A;  3A52 A;  4LRE A;  2X98 A;  1E1Z P;  1EW9 A;  2GSO A;  3UO0 A;  4CXK A;  1E3C P;  3IDD A;  4GTW A;  4UOO A;  5KXA A;  1SHN A;  2ANH A;  4N7T A;  1P49 A;  1EJJ A;  4LR2 A;  1EQJ A;  1SHQ A;  3BDH A;  5DLT A;  3TWZ A;  3UNY A;  4LRA A;  2QZU A;  3NKN A;  4KAY A;  2W5Q A;  3TX0 A;  1KHN A;  3NKO A;  4LRC A;  3WAW A;  4ZG9 A;  1ED8 A;  2RH6 A;  4MHX A;  1ANJ A;  1ZEF A;  3SZY A;  5K4P A;  4KM4 A;  4MIV A;  3NVL A;  4LR7 A;  5LRN A;  1HDH A;  3NKM A;  1URA A;  1ZEB A;  2W5V A;  1FSU A;  3ED4 A;  3LXQ A;  4KJD A;  4QAX A;  3E2D A;  1HQA A;  2W5S A;  3UN2 A;  1EW2 A;  5AJ9 A;  1KH4 A;  3SZZ A;  1ED9 A;  1KH5 A;  2XR9 A;  5EGE A;  2W5X A;  3WAV A;  3MK1 A;  4GTX A;  1ALH A;  2W8D A;  2GLQ A;  5L0E A;  5GRR A;  1AJC A;  1AJD A;  3IGZ B;  3T00 A;  3NKP A;  4UPK A;  1ELY A;  4MY4 A;  2GA3 A;  4CYS A;  1ALI A;  5EGH A;  2W5R A;  2W8S A;  3M8Z A;  1EW8 A;  1O98 A;  4LRB A;  4CXS A;  2G9Y A;  1Y7A A;  3WBH A;  5LRM A;  5INH A;  2IFY A;  4KJG A;  4LRD A;  4UPL A;  1AJA A;  3M8W A;  5IJQ A;  5L0B A;  1KHL A;  3BDG A;  1HJK A;  4ZG6 A;  1Y6V A;  4CXU A;  1KHJ A;  5DLV A;  1ELZ A;  3WAX A;  4LRF A;  4FDI A;  1KH9 A;  2GSN A;  2VQR A;  3MK2 A;  3OT9 A;  3B5Q A;  3KD8 A;  4UOR A;  5L0K A;  3BDG B;  4LR8 A;  4GTZ A;  3T02 A;  1URB A;  5HRT A;  5TJ3 A;  4GTY A;  1ELX A;  2IUC A;  4YR1 A;  1ANI A;  1K7H A;  2D1G A; 
#chains in the Genus database with same CATH homology
 4NWJ A;  4NWX A;  5LIA A;  3CMR A;  1KH7 A;  1E2S P;  1EI6 A;  3NKR A;  4FDJ A;  2IUC B;  4B56 A;  3TG0 A;  3WAY A;  1ALJ A;  3DYC A;  4UPH A;  1AUK A;  5GOV A;  3MK0 A;  1N2L A;  2ZKT A;  1E33 P;  3T01 A;  1N2K A;  4LR9 A;  1ZED A;  4UOP A;  4ZGA A;  3DPC A;  1AJB A;  4ZG7 A;  5C66 A;  4UPI A;  2XRG A;  3UN3 A;  3Q3Q A;  3M7V A;  2W5T A;  4TN0 A;  3M8Y A;  3NKQ A;  1B8J A;  5IJS A;  1KHK A;  5DLW A;  3BDF A;  3IGY B;  1O99 A;  4CYR A;  4LQY A;  1ALK A;  3UN5 A;  2GSU A;  5LQQ A;  4KAV A;  2W5W A;  3A52 A;  4LRE A;  2X98 A;  1E1Z P;  1EW9 A;  2GSO A;  3UO0 A;  4CXK A;  1E3C P;  3IDD A;  4GTW A;  4UOO A;  5KXA A;  1SHN A;  2ANH A;  4N7T A;  1P49 A;  1EJJ A;  4LR2 A;  1EQJ A;  1SHQ A;  3BDH A;  5DLT A;  3TWZ A;  3UNY A;  4LRA A;  2QZU A;  3NKN A;  4KAY A;  2W5Q A;  3TX0 A;  1KHN A;  3NKO A;  4LRC A;  3WAW A;  4ZG9 A;  1ED8 A;  2RH6 A;  4MHX A;  1ANJ A;  1ZEF A;  3SZY A;  5K4P A;  4KM4 A;  4MIV A;  3NVL A;  4LR7 A;  5LRN A;  1HDH A;  3NKM A;  1URA A;  1ZEB A;  2W5V A;  1FSU A;  3ED4 A;  3LXQ A;  4KJD A;  4QAX A;  3E2D A;  1HQA A;  2W5S A;  3UN2 A;  1EW2 A;  5AJ9 A;  1KH4 A;  3SZZ A;  1ED9 A;  1KH5 A;  2XR9 A;  5EGE A;  2W5X A;  3WAV A;  3MK1 A;  4GTX A;  1ALH A;  2W8D A;  2GLQ A;  5L0E A;  5GRR A;  1AJC A;  1AJD A;  3IGZ B;  3T00 A;  3NKP A;  4UPK A;  1ELY A;  4MY4 A;  2GA3 A;  4CYS A;  1ALI A;  5EGH A;  2W5R A;  2W8S A;  3M8Z A;  1EW8 A;  1O98 A;  4LRB A;  4CXS A;  2G9Y A;  1Y7A A;  3WBH A;  5LRM A;  5INH A;  2IFY A;  4KJG A;  4LRD A;  4UPL A;  1AJA A;  3M8W A;  5IJQ A;  5L0B A;  1KHL A;  3BDG A;  1HJK A;  4ZG6 A;  1Y6V A;  4CXU A;  1KHJ A;  5DLV A;  1ELZ A;  3WAX A;  4LRF A;  4FDI A;  1KH9 A;  2GSN A;  2VQR A;  3MK2 A;  3OT9 A;  3B5Q A;  3KD8 A;  4UOR A;  5L0K A;  3BDG B;  4LR8 A;  4GTZ A;  3T02 A;  1URB A;  5HRT A;  5TJ3 A;  4GTY A;  1ELX A;  2IUC A;  4YR1 A;  1ANI A;  1K7H A;  2D1G A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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