2JU1A

Solution structure of acyl carrier protein domain from module 2 of 6-deoxyerythronolide b synthase (debs)
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
95
structure length
95
Chain Sequence
GSHMLRDRLAGLPRAERTAELVRLVRTSTATVLGHDDPKAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAELG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Erythronolide synthase
publication title Solution structure and proposed domain domain recognition interface of an acyl carrier protein domain from a modular polyketide synthase.
pubmed doi rcsb
source organism Saccharopolyspora erythraea
total genus 22
structure length 95
sequence length 95
ec nomenclature ec 2.3.1.94: 6-deoxyerythronolide-B synthase.
pdb deposition date 2007-08-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2ju1A00
2KGEA 2LKIA 4MRTC 2FHSC 2EHTA 2N6YA 1ACPA 2FVEA 2KGAA 2L4BA 2LIUA 2N50A 2X2BA 4IZ6A 2KW2A 1AF8A 2KOOA 2EHSA 2KOSA 3EJEA 5HV8A 2GDXA 2FQ2A 2CQ8A 1VKUA 2FACA 1DV5A 4DG9A 2FQ1A 2KR5A 4PWVB 2FVFA 3LMOA 4H2WC 1NQ4A 2ROQA 2KG8A 2LPKA 1OR5A 2AVAA 2LL8A 2GDWA 2MR7A 2FQ0A 5HVCA 3RG2A 2GDYA 2LIWA 2JGPA 2LTEA 4R0MA 2KOQA 2L9FA 3GZLA 2CNRA 1F80D 2N6ZA 2PNGA 4CA3A 2FADA 1X3OA 2JU2A 2KWLA 2MVUA 2DNWA 4H2YC 3EJBA 2M5RA 2K0YA 2XZ0D 2MD9A 4BPFA 2AFDA 2K0XA 2MF4A 2K2QA 2QNWA 4BPHA 1L0IA 3CE7A 1DNYA 2N5IA 2XZ1C 2K94A 2CGQA 5KP8B 2N98A 4PXHB 2K92A 4HKGA 4BPGA 2AF8A 2KG9A 1HQBA 2MR8A 5KP6B 2KORA 2MVVA 2JU1A 2KOPA 1L0HA 2KG6A 2MY5A 2K93A 2N5HA 2JQ4A 2LMLA 3NY7B 2L22A 3GZMA 5CZDB 2VSQA 2L0QA 1T8KA 2KGDA 2KGCA 2CG5B 1HY8A 2FAEA 2FVAA 4H2XC 4NEOA 5EJDA 5KP7B 1KLPA 2AFEA 3EJDA 2LOLA
chains in the Genus database with same CATH superfamily
2KGEA 2FHSC 1M6EX 2KGAA 2XV6A 1A8OA 1YHQP 3VRLC 1AF8A 2EHSA 2ERHA 2KOSA 5HV8A 2P9XA 5HGMA 2CQ8A 1VKUA 7CEIA 2GZFA 2DGYA 1E6JP 3LRYA 3LMOA 1NQ4A 2OARA 5F2NA 1GXGA 5HGLA 5I4TG 1BAJA 2MR7A 1VHNA 3P05A 1BXIA 2VLPA 5HVCA 2LIWA 2PENA 1Q7YQ 3CCVP 3GJNA 2LTEA 5BS2A 1QVFO 4QNBA 2L9FA 2CNRA 2JYGA 2EG5A 3DS0A 2FADA 2KWLA 2K0DX 4H2YC 3EJBA 3DS2A 4PH0A 3HZQA 2K0XA 3M1MA 2PY8A 1L0IA 2GZJA 4XROA 1M90Q 3Q20A 4U0AA 2VLNA 2XZ1C 5KP8B 2CGQA 2K92A 2AF8A 2GZIA 1CEIA 2KORA 4XFYA 2KOPA 4WYMA 2MY5A 2N5HA 1YI2P 2L22A 2VSQA 1EIAA 2CG5B 2FAEA 4COPA 2EFJA 4NEOA 5EJDA 4M0IA 3NY7B 2N6YA 2VLQA 4XRQA 2LIUA 5HGNA 2OTLP 1D1DA 2KW2A 4U0CA 1UJZA 2GZEA 4U0FA 3EJEA 2FQ2A 2FACA 1DV5A 1KC8Q 2FQ1A 2KR5A 1RO0A 2BUOA 3G71P 1W2BO 3OW2O 3CCRP 1IMPA 1KD1Q 1AUMA 2QA4P 2AVAA 3CD6P 1VQMP 3DTJA 1N8RQ 1RO2A 2FQ0A 1YJWP 3RG2A 1EOQA 4R0MA 4GR6A 1AYIA 4QKOA 1ZNVA 4F37A 2MVUA 1M74A 3DS1A 1IMQA 1VQ9P 2PEMA 2K2QA 2MF4A 4PH1A 3H0DA 1K9MQ 3CE7A 2N98A 4PXHB 4HKGA 5F2OA 4BPGA 3WBHA 2MR8A 2MVVA 2KG6A 1YJ9P 3GZMA 1VQNP 3I55P 2PEIA 2L0QA 3MGEA 4UHPB 2KGDA 1HY8A 2FVAA 4H2XC 1KLPA 2PEOA 2JBGA 3GKLC 2AFEA 3G0VA 4MRTC 1ACPA 2FVEA 2EIAA 2N50A 3G21A 2WPTA 3I56P 1NJIQ 2OTJP 4U0EA 1MZ8A 3CCEP 3DS4A 1YITP 2Z44A 2FVFA 4H2WC 5HGOA 2PEKA 1K30A 4GR2A 1VQOP 3H4EA 1S72P 2LL8A 2GDWA 3G6EP 2Z45A 5F2KA 2GDYA 3G28A 3G4SP 1VQKP 2JB0A 2KOQA 2N6ZA 1F80D 1GXHA 3CMEP 3DS3A 2PEQA 1VQ8P 4CA3A 2XXMA 2JU2A 1X3OA 2DNWA 5JPAA 2K0YA 2VLOA 2XZ0D 3CXCO 2KODA 2L6EA 1M1KQ 1DNYA 3DS5A 2K94A 4COCA 1ZMBA 3CMAP 3CPWO 1EMVA 2CWOA 2JO0A 2JU1A 2JQ4A 2GYKA 2NO8A 2LMLA 2GZGA 1VQ5P 3CCSP 3CCLP 5KP7B 4U0BA 2Z46A 1Q81Q 1A43A 2LOLA 2LKIA 2EHTA 3HYBA 2JAZA 3U43A 2L4BA 1VQLP 1VQ6P 2X2BA 4IZ6A 3G29A 2KOOA 2XT1A 2BHVA 1VQ7P 3G1IA 1QRJA 1YIJP 2GDXA 1Z6MA 4IPYA 1QVGO 4DG9A 1Q82Q 4PWVB 2PEJA 3NTEA 3G1GA 2ROQA 3CCJP 2QEXP 1GPJA 2KG8A 2M8PA 3CCUP 3DPHA 2LPKA 3CCMP 1OR5A 2JYLA 3B4QA 1E0HA 1VQPP 5EW5E 1K73Q 4XFZA 3RG6C 2K5XA 3H47A 1RNIA 2JGPA 3E2DA 3GZLA 2PNGA 2M8LA 1IUQA 4XFXA 4U0DA 1Q86Q 2M5RA 2MD9A 4BPFA 2AFDA 3CC7P 1YJNP 1JJ2O 2QNWA 4BPHA 2E1MA 3CC2P 1VQ4P 2N5IA 3G26A 2M8NA 2KG9A 1HQBA 5DCKA 1K8AQ 5KP6B 3CC4P 1FR2A 1L0HA 1KQSO 2K93A 3CCQP 5CZDB 1T8KA 5BS1A 2ONTA 1M6NA 2KGCA 1UNKA 2LF4A 3B5IA 3EJDA
chains in the Genus database with same CATH topology
2KGEA 2LKIA 4MRTC 2FHSC 2EHTA 2N6YA 1ACPA 2FVEA 2KGAA 2L4BA 2LIUA 2N50A 2X2BA 4IZ6A 2KW2A 1AF8A 2KOOA 2EHSA 2KOSA 3EJEA 5HV8A 2GDXA 2FQ2A 2CQ8A 1VKUA 2FACA 1DV5A 4DG9A 2FQ1A 2KR5A 4PWVB 2FVFA 3LMOA 4H2WC 1NQ4A 2ROQA 2KG8A 2LPKA 1OR5A 2AVAA 2LL8A 2GDWA 2MR7A 2FQ0A 5HVCA 3RG2A 2GDYA 2LIWA 2JGPA 2LTEA 4R0MA 2KOQA 2L9FA 3GZLA 2CNRA 1F80D 2N6ZA 2PNGA 4CA3A 2FADA 1X3OA 2JU2A 2KWLA 2MVUA 2DNWA 4H2YC 3EJBA 2M5RA 2K0YA 2XZ0D 2MD9A 4BPFA 2AFDA 2K0XA 2MF4A 2K2QA 2QNWA 4BPHA 1L0IA 3CE7A 1DNYA 2N5IA 2XZ1C 2K94A 2CGQA 5KP8B 2N98A 4PXHB 2K92A 4HKGA 4BPGA 2AF8A 2KG9A 1HQBA 2MR8A 5KP6B 2KORA 2MVVA 2JU1A 2KOPA 1L0HA 2KG6A 2MY5A 2K93A 2N5HA 2JQ4A 2LMLA 3NY7B 2L22A 3GZMA 5CZDB 2VSQA 2L0QA 1T8KA 2KGDA 2KGCA 2CG5B 1HY8A 2FAEA 2FVAA 4H2XC 4NEOA 5EJDA 5KP7B 1KLPA 2AFEA 3EJDA 2LOLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KGE A;  2LKI A;  4MRT C;  2FHS C;  2EHT A;  2N6Y A;  1ACP A;  2FVE A;  2KGA A;  2L4B A;  2LIU A;  2N50 A;  2X2B A;  4IZ6 A;  2KW2 A;  1AF8 A;  2KOO A;  2EHS A;  2KOS A;  3EJE A;  5HV8 A;  2GDX A;  2FQ2 A;  2CQ8 A;  1VKU A;  2FAC A;  1DV5 A;  4DG9 A;  2FQ1 A;  2KR5 A;  4PWV B;  2FVF A;  3LMO A;  4H2W C;  1NQ4 A;  2ROQ A;  2KG8 A;  2LPK A;  1OR5 A;  2AVA A;  2LL8 A;  2GDW A;  2MR7 A;  2FQ0 A;  5HVC A;  3RG2 A;  2GDY A;  2LIW A;  2JGP A;  2LTE A;  4R0M A;  2KOQ A;  2L9F A;  3GZL A;  2CNR A;  1F80 D;  2N6Z A;  2PNG A;  4CA3 A;  2FAD A;  1X3O A;  2JU2 A;  2KWL A;  2MVU A;  2DNW A;  4H2Y C;  3EJB A;  2M5R A;  2K0Y A;  2XZ0 D;  2MD9 A;  4BPF A;  2AFD A;  2K0X A;  2MF4 A;  2K2Q A;  2QNW A;  4BPH A;  1L0I A;  3CE7 A;  1DNY A;  2N5I A;  2XZ1 C;  2K94 A;  2CGQ A;  5KP8 B;  2N98 A;  4PXH B;  2K92 A;  4HKG A;  4BPG A;  2AF8 A;  2KG9 A;  1HQB A;  2MR8 A;  5KP6 B;  2KOR A;  2MVV A;  2JU1 A;  2KOP A;  1L0H A;  2KG6 A;  2MY5 A;  2K93 A;  2N5H A;  2JQ4 A;  2LML A;  3NY7 B;  2L22 A;  3GZM A;  5CZD B;  2VSQ A;  2L0Q A;  1T8K A;  2KGD A;  2KGC A;  2CG5 B;  1HY8 A;  2FAE A;  2FVA A;  4H2X C;  4NEO A;  5EJD A;  5KP7 B;  1KLP A;  2AFE A;  3EJD A;  2LOL A; 
#chains in the Genus database with same CATH topology
 2KGE A;  2FHS C;  1M6E X;  2KGA A;  2XV6 A;  1A8O A;  1YHQ P;  3VRL C;  1AF8 A;  2EHS A;  2ERH A;  2KOS A;  5HV8 A;  2P9X A;  5HGM A;  2CQ8 A;  1VKU A;  7CEI A;  2GZF A;  2DGY A;  1E6J P;  3LRY A;  3LMO A;  1NQ4 A;  2OAR A;  5F2N A;  1GXG A;  5HGL A;  5I4T G;  1BAJ A;  2MR7 A;  1VHN A;  3P05 A;  1BXI A;  2VLP A;  5HVC A;  2LIW A;  2PEN A;  1Q7Y Q;  3CCV P;  3GJN A;  2LTE A;  5BS2 A;  1QVF O;  4QNB A;  2L9F A;  2CNR A;  2JYG A;  2EG5 A;  3DS0 A;  2FAD A;  2KWL A;  2K0D X;  4H2Y C;  3EJB A;  3DS2 A;  4PH0 A;  3HZQ A;  2K0X A;  3M1M A;  2PY8 A;  1L0I A;  2GZJ A;  4XRO A;  1M90 Q;  3Q20 A;  4U0A A;  2VLN A;  2XZ1 C;  5KP8 B;  2CGQ A;  2K92 A;  2AF8 A;  2GZI A;  1CEI A;  2KOR A;  4XFY A;  2KOP A;  4WYM A;  2MY5 A;  2N5H A;  1YI2 P;  2L22 A;  2VSQ A;  1EIA A;  2CG5 B;  2FAE A;  4COP A;  2EFJ A;  4NEO A;  5EJD A;  4M0I A;  3NY7 B;  2N6Y A;  2VLQ A;  4XRQ A;  2LIU A;  5HGN A;  2OTL P;  1D1D A;  2KW2 A;  4U0C A;  1UJZ A;  2GZE A;  4U0F A;  3EJE A;  2FQ2 A;  2FAC A;  1DV5 A;  1KC8 Q;  2FQ1 A;  2KR5 A;  1RO0 A;  2BUO A;  3G71 P;  1W2B O;  3OW2 O;  3CCR P;  1IMP A;  1KD1 Q;  1AUM A;  2QA4 P;  2AVA A;  3CD6 P;  1VQM P;  3DTJ A;  1N8R Q;  1RO2 A;  2FQ0 A;  1YJW P;  3RG2 A;  1EOQ A;  4R0M A;  4GR6 A;  1AYI A;  4QKO A;  1ZNV A;  4F37 A;  2MVU A;  1M74 A;  3DS1 A;  1IMQ A;  1VQ9 P;  2PEM A;  2K2Q A;  2MF4 A;  4PH1 A;  3H0D A;  1K9M Q;  3CE7 A;  2N98 A;  4PXH B;  4HKG A;  5F2O A;  4BPG A;  3WBH A;  2MR8 A;  2MVV A;  2KG6 A;  1YJ9 P;  3GZM A;  1VQN P;  3I55 P;  2PEI A;  2L0Q A;  3MGE A;  4UHP B;  2KGD A;  1HY8 A;  2FVA A;  4H2X C;  1KLP A;  2PEO A;  2JBG A;  3GKL C;  2AFE A;  3G0V A;  4MRT C;  1ACP A;  2FVE A;  2EIA A;  2N50 A;  3G21 A;  2WPT A;  3I56 P;  1NJI Q;  2OTJ P;  4U0E A;  1MZ8 A;  3CCE P;  3DS4 A;  1YIT P;  2Z44 A;  2FVF A;  4H2W C;  5HGO A;  2PEK A;  1K30 A;  4GR2 A;  1VQO P;  3H4E A;  1S72 P;  2LL8 A;  2GDW A;  3G6E P;  2Z45 A;  5F2K A;  2GDY A;  3G28 A;  3G4S P;  1VQK P;  2JB0 A;  2KOQ A;  2N6Z A;  1F80 D;  1GXH A;  3CME P;  3DS3 A;  2PEQ A;  1VQ8 P;  4CA3 A;  2XXM A;  2JU2 A;  1X3O A;  2DNW A;  5JPA A;  2K0Y A;  2VLO A;  2XZ0 D;  3CXC O;  2KOD A;  2L6E A;  1M1K Q;  1DNY A;  3DS5 A;  2K94 A;  4COC A;  1ZMB A;  3CMA P;  3CPW O;  1EMV A;  2CWO A;  2JO0 A;  2JU1 A;  2JQ4 A;  2GYK A;  2NO8 A;  2LML A;  2GZG A;  1VQ5 P;  3CCS P;  3CCL P;  5KP7 B;  4U0B A;  2Z46 A;  1Q81 Q;  1A43 A;  2LOL A;  2LKI A;  2EHT A;  3HYB A;  2JAZ A;  3U43 A;  2L4B A;  1VQL P;  1VQ6 P;  2X2B A;  4IZ6 A;  3G29 A;  2KOO A;  2XT1 A;  2BHV A;  1VQ7 P;  3G1I A;  1QRJ A;  1YIJ P;  2GDX A;  1Z6M A;  4IPY A;  1QVG O;  4DG9 A;  1Q82 Q;  4PWV B;  2PEJ A;  3NTE A;  3G1G A;  2ROQ A;  3CCJ P;  2QEX P;  1GPJ A;  2KG8 A;  2M8P A;  3CCU P;  3DPH A;  2LPK A;  3CCM P;  1OR5 A;  2JYL A;  3B4Q A;  1E0H A;  1VQP P;  5EW5 E;  1K73 Q;  4XFZ A;  3RG6 C;  2K5X A;  3H47 A;  1RNI A;  2JGP A;  3E2D A;  3GZL A;  2PNG A;  2M8L A;  1IUQ A;  4XFX A;  4U0D A;  1Q86 Q;  2M5R A;  2MD9 A;  4BPF A;  2AFD A;  3CC7 P;  1YJN P;  1JJ2 O;  2QNW A;  4BPH A;  2E1M A;  3CC2 P;  1VQ4 P;  2N5I A;  3G26 A;  2M8N A;  2KG9 A;  1HQB A;  5DCK A;  1K8A Q;  5KP6 B;  3CC4 P;  1FR2 A;  1L0H A;  1KQS O;  2K93 A;  3CCQ P;  5CZD B;  1T8K A;  5BS1 A;  2ONT A;  1M6N A;  2KGC A;  1UNK A;  2LF4 A;  3B5I A;  3EJD A; 
#chains in the Genus database with same CATH homology
 2KGE A;  2LKI A;  4MRT C;  2FHS C;  2EHT A;  2N6Y A;  1ACP A;  2FVE A;  2KGA A;  2L4B A;  2LIU A;  2N50 A;  2X2B A;  4IZ6 A;  2KW2 A;  1AF8 A;  2KOO A;  2EHS A;  2KOS A;  3EJE A;  5HV8 A;  2GDX A;  2FQ2 A;  2CQ8 A;  1VKU A;  2FAC A;  1DV5 A;  4DG9 A;  2FQ1 A;  2KR5 A;  4PWV B;  2FVF A;  3LMO A;  4H2W C;  1NQ4 A;  2ROQ A;  2KG8 A;  2LPK A;  1OR5 A;  2AVA A;  2LL8 A;  2GDW A;  2MR7 A;  2FQ0 A;  5HVC A;  3RG2 A;  2GDY A;  2LIW A;  2JGP A;  2LTE A;  4R0M A;  2KOQ A;  2L9F A;  3GZL A;  2CNR A;  1F80 D;  2N6Z A;  2PNG A;  4CA3 A;  2FAD A;  1X3O A;  2JU2 A;  2KWL A;  2MVU A;  2DNW A;  4H2Y C;  3EJB A;  2M5R A;  2K0Y A;  2XZ0 D;  2MD9 A;  4BPF A;  2AFD A;  2K0X A;  2MF4 A;  2K2Q A;  2QNW A;  4BPH A;  1L0I A;  3CE7 A;  1DNY A;  2N5I A;  2XZ1 C;  2K94 A;  2CGQ A;  5KP8 B;  2N98 A;  4PXH B;  2K92 A;  4HKG A;  4BPG A;  2AF8 A;  2KG9 A;  1HQB A;  2MR8 A;  5KP6 B;  2KOR A;  2MVV A;  2JU1 A;  2KOP A;  1L0H A;  2KG6 A;  2MY5 A;  2K93 A;  2N5H A;  2JQ4 A;  2LML A;  3NY7 B;  2L22 A;  3GZM A;  5CZD B;  2VSQ A;  2L0Q A;  1T8K A;  2KGD A;  2KGC A;  2CG5 B;  1HY8 A;  2FAE A;  2FVA A;  4H2X C;  4NEO A;  5EJD A;  5KP7 B;  1KLP A;  2AFE A;  3EJD A;  2LOL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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