2KFUA

Pknb-phosphorylated rv1827
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
162
structure length
161
Chain Sequence
VTDMNPDIEKDQTSDEVTVETSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTGGP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Protein binding
molecule keywords Rv1827 pThr 22
publication title An intramolecular switch regulates phosphoindependent FHA domain interactions in Mycobacterium tuberculosis.
pubmed doi rcsb
source organism Mycobacterium tuberculosis
total genus 22
structure length 161
sequence length 162
ec nomenclature
pdb deposition date 2009-02-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00498 FHA FHA domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.200.20 Mainly Beta Sandwich Tumour Suppressor Smad4 Tumour Suppressor Smad4 2kfuA01
2JQJA 1YJ5C 3I6WA 5E50A 3UOTA 3HUFA 2JQLA 4D9VA 2XT9B 3UN0A 1K3NA 2KFUA 3VPYA 1G3GA 3VA4A 5A8IA 1UJXA 3UV0A 3ELSA 1J4QA 2CSWA 2W3OA 1K3QA 2KKLA 4A0EA 5DJOA 4EGXA 1DMZA 3UNNA 1GXCA 1G6GA 3ELVA 2AFFA 3I0NA 4H87A 4EJQA 2EH0A 1WLNA 2G1LA 2FF4A 3MDBA 3FM8A 1LGQA 4QCJA 3UNMA 1FHQA 2A0TA 3GQSA 2JPEA 1WV3A 1YJMA 2LC1A 3KT9A 1MZKA 3I0MA 1LGPA 3I6UA 2JKDA 1J4KA 1J4PA 3PO8A 1J4LA 1K3JA 1QU5A 4JONA 1UHTA 2PIEA 3VA1A 1K2NA 2KB3A 1K2MA 3OUNA 1J4OA 2BRFA 3HX1A 3UMZA 1FHRA 1R21A 2FEZA 3POAA 2KB4A 4G2SA 3HUEA 2JQIA
chains in the Genus database with same CATH superfamily
2JQJA 4V24A 1YJ5C 2P1RA 3I6WA 4WRRA 5EJHA 1DD1A 5E50A 3UOTA 5EJFA 1MJSA 3HUFA 3VZBA 2JQLA 5EJGA 4D9VA 2XT9B 3UN0A 1K3NA 4WERA 2KFUA 5DHPA 3VPYA 2I2FA 3V7YA 1Z0ZA 1G3GA 2Q5FA 2XXSA 5DHRA 3VA4A 5A8IA 1UJXA 3UV0A 5DHQA 3AFOA 3V7WA 5JEKA 2QVLA 3DITA 3ELSA 3V8QA 1J4QA 2CSWA 2W3OA 5C4VA 1ZOQA 2KKLA 1K3QA 4A0EA 5DJOA 4EGXA 5DHSA 1DMZA 3UNNA 1GXCA 1KHXA 3V8RA 1G6GA 3ELVA 4HAOA 2AFFA 3I0NA 5DHTA 4H87A 4EJQA 2EH0A 1WLNA 5JEOA 2G1LA 1U0RA 2FF4A 3S40A 1QWTA 3MDBA 1LGQA 3FM8A 1Z0UA 4L02A 4QCJA 1U7VB 2I2AA 4JIVD 5JEJA 3UNMA 1FHQA 2A0TA 5BVIA 3GQSA 5EJIA 2I2CA 2JPEA 4DY6A 1WV3A 1YJMA 1DEVA 2LC1A 4KU0D 3V8PA 5DHUA 3KT9A 3T5PA 2AN1A 3VZDA 1MZKA 3I0MA 2I29A 1MK2A 1LGPA 1Y3HA 5JELA 4A4YA 3I6UA 2JKDA 1J4KA 1MR1A 1KHUA 1J4PA 3PO8A 1J4LA 4R9PA 1K3JA 1Y3IA 1QU5A 2I2BA 1U7FA 1UHTA 4JONA 3VZCA 3GMJA 2PIEA 1Z0SA 4JIWD 2I2DA 3VA1A 1G88A 1K2NA 2KB3A 1K2MA 1J2FA 3OUNA 1J4OA 5JEMA 5JERA 2JGRA 1U0TA 2BRFA 3HX1A 2QV7A 3V80A 3UMZA 2BONA 3V8MA 3A77A 1FHRA 1R21A 2FEZA 3POAA 3V7UA 2KB4A 3V8NA 1YGSA 4G2SA 2I1WA 3HUEA 2JQIA 1U7FB 3PFNA 3DSHA 1YT5A 1U7VA 1SUWA
chains in the Genus database with same CATH topology
2JQJA 4V24A 1YJ5C 2P1RA 3I6WA 4WRRA 1DD1A 5E50A 3UOTA 1MJSA 3HUFA 3VZBA 2JQLA 4D9VA 2XT9B 3UN0A 1K3NA 4WERA 2KFUA 3VPYA 1G3GA 2XXSA 3VA4A 5A8IA 1UJXA 3UV0A 5JEKA 2QVLA 3DITA 3ELSA 1J4QA 2CSWA 2W3OA 5C4VA 1ZOQA 2KKLA 1K3QA 4A0EA 5DJOA 4EGXA 1DMZA 3UNNA 1GXCA 1KHXA 1G6GA 3ELVA 2AFFA 3I0NA 4H87A 4EJQA 2EH0A 1WLNA 5JEOA 2G1LA 2FF4A 3S40A 1QWTA 3MDBA 3FM8A 1LGQA 4L02A 4QCJA 1U7VB 4JIVD 5JEJA 3UNMA 1FHQA 2A0TA 5BVIA 3GQSA 2JPEA 1WV3A 1YJMA 1DEVA 2LC1A 4KU0D 3KT9A 3T5PA 3VZDA 1MZKA 3I0MA 1MK2A 1LGPA 5JELA 4A4YA 3I6UA 2JKDA 1J4KA 1MR1A 1KHUA 1J4PA 3PO8A 1J4LA 4R9PA 1K3JA 1QU5A 1U7FA 1UHTA 4JONA 3VZCA 3GMJA 2PIEA 4JIWD 3VA1A 1G88A 1K2NA 2KB3A 1K2MA 1J2FA 3OUNA 1J4OA 5JEMA 5JERA 2JGRA 2BRFA 3HX1A 2QV7A 3UMZA 2BONA 3A77A 1FHRA 1R21A 2FEZA 3POAA 2KB4A 1YGSA 4G2SA 3HUEA 2JQIA 1U7FB 3DSHA 1U7VA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2JQJ A;  1YJ5 C;  3I6W A;  5E50 A;  3UOT A;  3HUF A;  2JQL A;  4D9V A;  2XT9 B;  3UN0 A;  1K3N A;  2KFU A;  3VPY A;  1G3G A;  3VA4 A;  5A8I A;  1UJX A;  3UV0 A;  3ELS A;  1J4Q A;  2CSW A;  2W3O A;  1K3Q A;  2KKL A;  4A0E A;  5DJO A;  4EGX A;  1DMZ A;  3UNN A;  1GXC A;  1G6G A;  3ELV A;  2AFF A;  3I0N A;  4H87 A;  4EJQ A;  2EH0 A;  1WLN A;  2G1L A;  2FF4 A;  3MDB A;  3FM8 A;  1LGQ A;  4QCJ A;  3UNM A;  1FHQ A;  2A0T A;  3GQS A;  2JPE A;  1WV3 A;  1YJM A;  2LC1 A;  3KT9 A;  1MZK A;  3I0M A;  1LGP A;  3I6U A;  2JKD A;  1J4K A;  1J4P A;  3PO8 A;  1J4L A;  1K3J A;  1QU5 A;  4JON A;  1UHT A;  2PIE A;  3VA1 A;  1K2N A;  2KB3 A;  1K2M A;  3OUN A;  1J4O A;  2BRF A;  3HX1 A;  3UMZ A;  1FHR A;  1R21 A;  2FEZ A;  3POA A;  2KB4 A;  4G2S A;  3HUE A;  2JQI A; 
#chains in the Genus database with same CATH topology
 2JQJ A;  4V24 A;  1YJ5 C;  2P1R A;  3I6W A;  4WRR A;  5EJH A;  1DD1 A;  5E50 A;  3UOT A;  5EJF A;  1MJS A;  3HUF A;  3VZB A;  2JQL A;  5EJG A;  4D9V A;  2XT9 B;  3UN0 A;  1K3N A;  4WER A;  2KFU A;  5DHP A;  3VPY A;  2I2F A;  3V7Y A;  1Z0Z A;  1G3G A;  2Q5F A;  2XXS A;  5DHR A;  3VA4 A;  5A8I A;  1UJX A;  3UV0 A;  5DHQ A;  3AFO A;  3V7W A;  5JEK A;  2QVL A;  3DIT A;  3ELS A;  3V8Q A;  1J4Q A;  2CSW A;  2W3O A;  5C4V A;  1ZOQ A;  2KKL A;  1K3Q A;  4A0E A;  5DJO A;  4EGX A;  5DHS A;  1DMZ A;  3UNN A;  1GXC A;  1KHX A;  3V8R A;  1G6G A;  3ELV A;  4HAO A;  2AFF A;  3I0N A;  5DHT A;  4H87 A;  4EJQ A;  2EH0 A;  1WLN A;  5JEO A;  2G1L A;  1U0R A;  2FF4 A;  3S40 A;  1QWT A;  3MDB A;  1LGQ A;  3FM8 A;  1Z0U A;  4L02 A;  4QCJ A;  1U7V B;  2I2A A;  4JIV D;  5JEJ A;  3UNM A;  1FHQ A;  2A0T A;  5BVI A;  3GQS A;  5EJI A;  2I2C A;  2JPE A;  4DY6 A;  1WV3 A;  1YJM A;  1DEV A;  2LC1 A;  4KU0 D;  3V8P A;  5DHU A;  3KT9 A;  3T5P A;  2AN1 A;  3VZD A;  1MZK A;  3I0M A;  2I29 A;  1MK2 A;  1LGP A;  1Y3H A;  5JEL A;  4A4Y A;  3I6U A;  2JKD A;  1J4K A;  1MR1 A;  1KHU A;  1J4P A;  3PO8 A;  1J4L A;  4R9P A;  1K3J A;  1Y3I A;  1QU5 A;  2I2B A;  1U7F A;  1UHT A;  4JON A;  3VZC A;  3GMJ A;  2PIE A;  1Z0S A;  4JIW D;  2I2D A;  3VA1 A;  1G88 A;  1K2N A;  2KB3 A;  1K2M A;  1J2F A;  3OUN A;  1J4O A;  5JEM A;  5JER A;  2JGR A;  1U0T A;  2BRF A;  3HX1 A;  2QV7 A;  3V80 A;  3UMZ A;  2BON A;  3V8M A;  3A77 A;  1FHR A;  1R21 A;  2FEZ A;  3POA A;  3V7U A;  2KB4 A;  3V8N A;  1YGS A;  4G2S A;  2I1W A;  3HUE A;  2JQI A;  1U7F B;  3PFN A;  3DSH A;  1YT5 A;  1U7V A;  1SUW A; 
#chains in the Genus database with same CATH homology
 2JQJ A;  4V24 A;  1YJ5 C;  2P1R A;  3I6W A;  4WRR A;  1DD1 A;  5E50 A;  3UOT A;  1MJS A;  3HUF A;  3VZB A;  2JQL A;  4D9V A;  2XT9 B;  3UN0 A;  1K3N A;  4WER A;  2KFU A;  3VPY A;  1G3G A;  2XXS A;  3VA4 A;  5A8I A;  1UJX A;  3UV0 A;  5JEK A;  2QVL A;  3DIT A;  3ELS A;  1J4Q A;  2CSW A;  2W3O A;  5C4V A;  1ZOQ A;  2KKL A;  1K3Q A;  4A0E A;  5DJO A;  4EGX A;  1DMZ A;  3UNN A;  1GXC A;  1KHX A;  1G6G A;  3ELV A;  2AFF A;  3I0N A;  4H87 A;  4EJQ A;  2EH0 A;  1WLN A;  5JEO A;  2G1L A;  2FF4 A;  3S40 A;  1QWT A;  3MDB A;  3FM8 A;  1LGQ A;  4L02 A;  4QCJ A;  1U7V B;  4JIV D;  5JEJ A;  3UNM A;  1FHQ A;  2A0T A;  5BVI A;  3GQS A;  2JPE A;  1WV3 A;  1YJM A;  1DEV A;  2LC1 A;  4KU0 D;  3KT9 A;  3T5P A;  3VZD A;  1MZK A;  3I0M A;  1MK2 A;  1LGP A;  5JEL A;  4A4Y A;  3I6U A;  2JKD A;  1J4K A;  1MR1 A;  1KHU A;  1J4P A;  3PO8 A;  1J4L A;  4R9P A;  1K3J A;  1QU5 A;  1U7F A;  1UHT A;  4JON A;  3VZC A;  3GMJ A;  2PIE A;  4JIW D;  3VA1 A;  1G88 A;  1K2N A;  2KB3 A;  1K2M A;  1J2F A;  3OUN A;  1J4O A;  5JEM A;  5JER A;  2JGR A;  2BRF A;  3HX1 A;  2QV7 A;  3UMZ A;  2BON A;  3A77 A;  1FHR A;  1R21 A;  2FEZ A;  3POA A;  2KB4 A;  1YGS A;  4G2S A;  3HUE A;  2JQI A;  1U7F B;  3DSH A;  1U7V A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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