2KG9A

Nmr solution structures of butyryl-acp (a non-polar, non pathway intermediate) from the actinorhodin polyketide synthase in streptomyces coelicolor
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
molecule keywords Actinorhodin polyketide synthase acyl carrier protein
publication title Probing the Interactions of Early Polyketide Intermediates with the Actinorhodin ACP from S. coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
total genus 23
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2009-03-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kg9A00
2KG9A 5CZDB 1VKUA 4CA3A 2GDXA 2KGEA 2LKIA 5KP7B 2MR7A 2VSQA 2AF8A 2AFEA 2LMLA 2CNRA 2LIUA 1DNYA 2XZ0D 3EJBA 2LTEA 5HVCA 2MVUA 4MRTC 4HKGA 2K2QA 2MY5A 2KGCA 1L0HA 2XZ1C 3GZMA 2M5RA 2JGPA 4H2XC 1X3OA 2KOPA 2L9FA 2CG5B 1AF8A 1NQ4A 2AFDA 2K0YA 2JU1A 2KGDA 2KGAA 4PXHB 5KP6B 4PWVB 5HV8A 4H2YC 4BPFA 2FHSC 2K94A 2AVAA 2GDYA 2LL8A 4NEOA 2FAEA 1T8KA 2N6ZA 5EJDA 2MF4A 3LMOA 4R0MA 2LOLA 3NY7B 2EHSA 2N6YA 2KR5A 1ACPA 2K93A 4IZ6A 2N5HA 2KWLA 3EJDA 3CE7A 2FACA 3EJEA 2KW2A 2K92A 4DG9A 1DV5A 2EHTA 2FQ1A 2L4BA 2GDWA 4BPHA 2K0XA 2FQ2A 2FVAA 2CGQA 2X2BA 2KG6A 2LPKA 2LIWA 2MVVA 4BPGA 5KP8B 3RG2A 2KORA 2KOQA 2MR8A 2KOOA 3GZLA 1OR5A 2MD9A 2N50A 2L22A 2ROQA 2JQ4A 2KOSA 2PNGA 2JU2A 2L0QA 2DNWA 1HY8A 2FQ0A 2FVFA 1KLPA 1HQBA 4H2WC 2N98A 2FVEA 2CQ8A 2FADA 2QNWA 2N5IA 1L0IA 2KG8A 1F80D
chains in the Genus database with same CATH superfamily
3DS0A 1VKUA 3CCLP 2L6EA 2PEQA 1BAJA 1YJWP 3H4EA 2NO8A 4UHPB 3M1MA 1VQMP 2CNRA 3VRLC 2XZ0D 2LTEA 1YHQP 3NTEA 1VQOP 4MRTC 4HKGA 2VLPA 2K2QA 2Z45A 2PY8A 2XV6A 2M8LA 4XFXA 2Z44A 2DGYA 2K5XA 2JYLA 3DS4A 1Z6MA 1KC8Q 1M6EX 1VQ9P 4H2YC 1A8OA 4BPFA 2FHSC 5HGLA 2AVAA 1EOQA 4XFZA 2FAEA 5DCKA 5EW5E 5EJDA 3U43A 2LOLA 3NY7B 2EHSA 3EJDA 1QRJA 2FACA 3EJEA 2GDWA 2PEOA 2FVAA 2CGQA 1KD1Q 2E1MA 1FR2A 2JB0A 1KQSO 1VQLP 5F2KA 3GZLA 2OARA 3G4SP 3G1GA 3DS5A 3GKLC 4U0CA 2JU2A 2GZIA 2DNWA 1GXHA 2Z46A 2FQ0A 1KLPA 4U0EA 4H2WC 2N98A 2FVEA 2FADA 3CCEP 2QNWA 2LF4A 1F80D 2KGEA 1E6JP 1M1KQ 4M0IA 2PEIA 1MZ8A 2VLQA 2LIUA 1DNYA 1E0HA 2XT1A 2PEJA 5HVCA 1NJIQ 1RO0A 2MY5A 3B4QA 1L0HA 3GZMA 2QEXP 1Q86Q 4H2XC 1VQ7P 2KOPA 3CCMP 2CG5B 2AFDA 2JU1A 1CEIA 1S72P 3RG6C 2KODA 4PWVB 5HV8A 3I55P 2K94A 3H47A 2CWOA 5F2NA 2PEKA 2LL8A 2GZEA 2VLOA 2EFJA 3DS1A 3CPWO 2N6ZA 1RO2A 3LMOA 1K30A 3G21A 1ZNVA 4IPYA 1ACPA 4U0DA 2N5HA 1QVGO 5JPAA 4DG9A 3CC4P 3I56P 3HYBA 2FQ2A 4GR2A 2KG6A 7CEIA 1QVFO 5KP8B 1N8RQ 3RG2A 1VQ4P 1IMQA 1OR5A 2N50A 2L22A 1YIJP 2GZGA 2JQ4A 4F37A 1JJ2O 1VQ6P 1VHNA 3MGEA 2N5IA 1VQKP 1Q82Q 2KG9A 5CZDB 4CA3A 1UJZA 4QKOA 5BS1A 3Q20A 2LKIA 4XROA 2MR7A 4COPA 2M8NA 2P9XA 2VSQA 4QNBA 3HZQA 1GXGA 3EJBA 4U0FA 3G29A 1YITP 1AUMA 2KGCA 1D1DA 2XZ1C 2M5RA 2WPTA 3CC7P 2GZJA 1YI2P 1AF8A 2K0YA 2KGDA 2KGAA 4PXHB 5KP6B 3G6EP 1ZMBA 2GZFA 3DS3A 3CMAP 1Q81Q 5BS2A 4NEOA 3GJNA 2EG5A 3G0VA 1RNIA 2KR5A 1Q7YQ 2K93A 4IZ6A 4U0BA 5HGMA 1IMPA 3CXCO 1IUQA 3CCQP 1YJ9P 4BPHA 2XXMA 1EMVA 3P05A 4BPGA 4U0AA 2OTJP 2MR8A 2KOOA 4XFYA 2MD9A 2VLNA 3G71P 2KOSA 1M74A 2L0QA 1BXIA 1HY8A 2FVFA 1HQBA 3CCUP 4WYMA 1L0IA 2KG8A 1M6NA 1K9MQ 2JO0A 3H0DA 3CCRP 2GDXA 1W2BO 5KP7B 3WBHA 5HGOA 3E2DA 1AYIA 4GR6A 2AF8A 2JBGA 2AFEA 2LMLA 2QA4P 3G1IA 3G26A 2MVUA 1M90Q 2BHVA 4PH0A 2JGPA 1X3OA 1VQ8P 2L9FA 1NQ4A 1K73Q 1GPJA 1VQPP 1VQNP 3LRYA 3CD6P 5F2OA 1A43A 2GDYA 3CCJP 3G28A 3B5IA 1T8KA 2MF4A 2M8PA 4R0MA 2OTLP 2N6YA 2GYKA 2PEMA 2KWLA 2ONTA 3CE7A 2KW2A 3DTJA 2K92A 1DV5A 2EIAA 2EHTA 2FQ1A 2L4BA 2K0XA 2BUOA 3DPHA 2X2BA 2LPKA 3CC2P 1UNKA 2LIWA 2MVVA 1YJNP 4PH1A 1VQ5P 2KORA 2KOQA 4XRQA 3CMEP 2JAZA 2ROQA 2ERHA 2PNGA 3CCSP 3CCVP 2PENA 5HGNA 3OW2O 1EIAA 2CQ8A 2K0DX 2JYGA 4COCA 3DS2A 5I4TG 1K8AQ
chains in the Genus database with same CATH topology
2KG9A 5CZDB 1VKUA 4CA3A 2GDXA 2KGEA 2LKIA 5KP7B 2MR7A 2VSQA 2AF8A 2AFEA 2LMLA 2CNRA 2LIUA 1DNYA 2XZ0D 3EJBA 2LTEA 5HVCA 2MVUA 4MRTC 4HKGA 2K2QA 2MY5A 2KGCA 1L0HA 2XZ1C 3GZMA 2M5RA 2JGPA 4H2XC 1X3OA 2KOPA 2L9FA 2CG5B 1AF8A 1NQ4A 2AFDA 2K0YA 2JU1A 2KGDA 2KGAA 4PXHB 5KP6B 4PWVB 5HV8A 4H2YC 4BPFA 2FHSC 2K94A 2AVAA 2GDYA 2LL8A 4NEOA 2FAEA 1T8KA 2N6ZA 5EJDA 2MF4A 3LMOA 4R0MA 2LOLA 3NY7B 2EHSA 2N6YA 2KR5A 1ACPA 2K93A 4IZ6A 2N5HA 2KWLA 3EJDA 3CE7A 2FACA 3EJEA 2KW2A 2K92A 4DG9A 1DV5A 2EHTA 2FQ1A 2L4BA 2GDWA 4BPHA 2K0XA 2FQ2A 2FVAA 2CGQA 2X2BA 2KG6A 2LPKA 2LIWA 2MVVA 4BPGA 5KP8B 3RG2A 2KORA 2KOQA 2MR8A 2KOOA 3GZLA 1OR5A 2MD9A 2N50A 2L22A 2ROQA 2JQ4A 2KOSA 2PNGA 2JU2A 2L0QA 2DNWA 1HY8A 2FQ0A 2FVFA 1KLPA 1HQBA 4H2WC 2N98A 2FVEA 2CQ8A 2FADA 2QNWA 2N5IA 1L0IA 2KG8A 1F80D
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KG9 A;  5CZD B;  1VKU A;  4CA3 A;  2GDX A;  2KGE A;  2LKI A;  5KP7 B;  2MR7 A;  2VSQ A;  2AF8 A;  2AFE A;  2LML A;  2CNR A;  2LIU A;  1DNY A;  2XZ0 D;  3EJB A;  2LTE A;  5HVC A;  2MVU A;  4MRT C;  4HKG A;  2K2Q A;  2MY5 A;  2KGC A;  1L0H A;  2XZ1 C;  3GZM A;  2M5R A;  2JGP A;  4H2X C;  1X3O A;  2KOP A;  2L9F A;  2CG5 B;  1AF8 A;  1NQ4 A;  2AFD A;  2K0Y A;  2JU1 A;  2KGD A;  2KGA A;  4PXH B;  5KP6 B;  4PWV B;  5HV8 A;  4H2Y C;  4BPF A;  2FHS C;  2K94 A;  2AVA A;  2GDY A;  2LL8 A;  4NEO A;  2FAE A;  1T8K A;  2N6Z A;  5EJD A;  2MF4 A;  3LMO A;  4R0M A;  2LOL A;  3NY7 B;  2EHS A;  2N6Y A;  2KR5 A;  1ACP A;  2K93 A;  4IZ6 A;  2N5H A;  2KWL A;  3EJD A;  3CE7 A;  2FAC A;  3EJE A;  2KW2 A;  2K92 A;  4DG9 A;  1DV5 A;  2EHT A;  2FQ1 A;  2L4B A;  2GDW A;  4BPH A;  2K0X A;  2FQ2 A;  2FVA A;  2CGQ A;  2X2B A;  2KG6 A;  2LPK A;  2LIW A;  2MVV A;  4BPG A;  5KP8 B;  3RG2 A;  2KOR A;  2KOQ A;  2MR8 A;  2KOO A;  3GZL A;  1OR5 A;  2MD9 A;  2N50 A;  2L22 A;  2ROQ A;  2JQ4 A;  2KOS A;  2PNG A;  2JU2 A;  2L0Q A;  2DNW A;  1HY8 A;  2FQ0 A;  2FVF A;  1KLP A;  1HQB A;  4H2W C;  2N98 A;  2FVE A;  2CQ8 A;  2FAD A;  2QNW A;  2N5I A;  1L0I A;  2KG8 A;  1F80 D; 
#chains in the Genus database with same CATH topology
 3DS0 A;  1VKU A;  3CCL P;  2L6E A;  2PEQ A;  1BAJ A;  1YJW P;  3H4E A;  2NO8 A;  4UHP B;  3M1M A;  1VQM P;  2CNR A;  3VRL C;  2XZ0 D;  2LTE A;  1YHQ P;  3NTE A;  1VQO P;  4MRT C;  4HKG A;  2VLP A;  2K2Q A;  2Z45 A;  2PY8 A;  2XV6 A;  2M8L A;  4XFX A;  2Z44 A;  2DGY A;  2K5X A;  2JYL A;  3DS4 A;  1Z6M A;  1KC8 Q;  1M6E X;  1VQ9 P;  4H2Y C;  1A8O A;  4BPF A;  2FHS C;  5HGL A;  2AVA A;  1EOQ A;  4XFZ A;  2FAE A;  5DCK A;  5EW5 E;  5EJD A;  3U43 A;  2LOL A;  3NY7 B;  2EHS A;  3EJD A;  1QRJ A;  2FAC A;  3EJE A;  2GDW A;  2PEO A;  2FVA A;  2CGQ A;  1KD1 Q;  2E1M A;  1FR2 A;  2JB0 A;  1KQS O;  1VQL P;  5F2K A;  3GZL A;  2OAR A;  3G4S P;  3G1G A;  3DS5 A;  3GKL C;  4U0C A;  2JU2 A;  2GZI A;  2DNW A;  1GXH A;  2Z46 A;  2FQ0 A;  1KLP A;  4U0E A;  4H2W C;  2N98 A;  2FVE A;  2FAD A;  3CCE P;  2QNW A;  2LF4 A;  1F80 D;  2KGE A;  1E6J P;  1M1K Q;  4M0I A;  2PEI A;  1MZ8 A;  2VLQ A;  2LIU A;  1DNY A;  1E0H A;  2XT1 A;  2PEJ A;  5HVC A;  1NJI Q;  1RO0 A;  2MY5 A;  3B4Q A;  1L0H A;  3GZM A;  2QEX P;  1Q86 Q;  4H2X C;  1VQ7 P;  2KOP A;  3CCM P;  2CG5 B;  2AFD A;  2JU1 A;  1CEI A;  1S72 P;  3RG6 C;  2KOD A;  4PWV B;  5HV8 A;  3I55 P;  2K94 A;  3H47 A;  2CWO A;  5F2N A;  2PEK A;  2LL8 A;  2GZE A;  2VLO A;  2EFJ A;  3DS1 A;  3CPW O;  2N6Z A;  1RO2 A;  3LMO A;  1K30 A;  3G21 A;  1ZNV A;  4IPY A;  1ACP A;  4U0D A;  2N5H A;  1QVG O;  5JPA A;  4DG9 A;  3CC4 P;  3I56 P;  3HYB A;  2FQ2 A;  4GR2 A;  2KG6 A;  7CEI A;  1QVF O;  5KP8 B;  1N8R Q;  3RG2 A;  1VQ4 P;  1IMQ A;  1OR5 A;  2N50 A;  2L22 A;  1YIJ P;  2GZG A;  2JQ4 A;  4F37 A;  1JJ2 O;  1VQ6 P;  1VHN A;  3MGE A;  2N5I A;  1VQK P;  1Q82 Q;  2KG9 A;  5CZD B;  4CA3 A;  1UJZ A;  4QKO A;  5BS1 A;  3Q20 A;  2LKI A;  4XRO A;  2MR7 A;  4COP A;  2M8N A;  2P9X A;  2VSQ A;  4QNB A;  3HZQ A;  1GXG A;  3EJB A;  4U0F A;  3G29 A;  1YIT P;  1AUM A;  2KGC A;  1D1D A;  2XZ1 C;  2M5R A;  2WPT A;  3CC7 P;  2GZJ A;  1YI2 P;  1AF8 A;  2K0Y A;  2KGD A;  2KGA A;  4PXH B;  5KP6 B;  3G6E P;  1ZMB A;  2GZF A;  3DS3 A;  3CMA P;  1Q81 Q;  5BS2 A;  4NEO A;  3GJN A;  2EG5 A;  3G0V A;  1RNI A;  2KR5 A;  1Q7Y Q;  2K93 A;  4IZ6 A;  4U0B A;  5HGM A;  1IMP A;  3CXC O;  1IUQ A;  3CCQ P;  1YJ9 P;  4BPH A;  2XXM A;  1EMV A;  3P05 A;  4BPG A;  4U0A A;  2OTJ P;  2MR8 A;  2KOO A;  4XFY A;  2MD9 A;  2VLN A;  3G71 P;  2KOS A;  1M74 A;  2L0Q A;  1BXI A;  1HY8 A;  2FVF A;  1HQB A;  3CCU P;  4WYM A;  1L0I A;  2KG8 A;  1M6N A;  1K9M Q;  2JO0 A;  3H0D A;  3CCR P;  2GDX A;  1W2B O;  5KP7 B;  3WBH A;  5HGO A;  3E2D A;  1AYI A;  4GR6 A;  2AF8 A;  2JBG A;  2AFE A;  2LML A;  2QA4 P;  3G1I A;  3G26 A;  2MVU A;  1M90 Q;  2BHV A;  4PH0 A;  2JGP A;  1X3O A;  1VQ8 P;  2L9F A;  1NQ4 A;  1K73 Q;  1GPJ A;  1VQP P;  1VQN P;  3LRY A;  3CD6 P;  5F2O A;  1A43 A;  2GDY A;  3CCJ P;  3G28 A;  3B5I A;  1T8K A;  2MF4 A;  2M8P A;  4R0M A;  2OTL P;  2N6Y A;  2GYK A;  2PEM A;  2KWL A;  2ONT A;  3CE7 A;  2KW2 A;  3DTJ A;  2K92 A;  1DV5 A;  2EIA A;  2EHT A;  2FQ1 A;  2L4B A;  2K0X A;  2BUO A;  3DPH A;  2X2B A;  2LPK A;  3CC2 P;  1UNK A;  2LIW A;  2MVV A;  1YJN P;  4PH1 A;  1VQ5 P;  2KOR A;  2KOQ A;  4XRQ A;  3CME P;  2JAZ A;  2ROQ A;  2ERH A;  2PNG A;  3CCS P;  3CCV P;  2PEN A;  5HGN A;  3OW2 O;  1EIA A;  2CQ8 A;  2K0D X;  2JYG A;  4COC A;  3DS2 A;  5I4T G;  1K8A Q; 
#chains in the Genus database with same CATH homology
 2KG9 A;  5CZD B;  1VKU A;  4CA3 A;  2GDX A;  2KGE A;  2LKI A;  5KP7 B;  2MR7 A;  2VSQ A;  2AF8 A;  2AFE A;  2LML A;  2CNR A;  2LIU A;  1DNY A;  2XZ0 D;  3EJB A;  2LTE A;  5HVC A;  2MVU A;  4MRT C;  4HKG A;  2K2Q A;  2MY5 A;  2KGC A;  1L0H A;  2XZ1 C;  3GZM A;  2M5R A;  2JGP A;  4H2X C;  1X3O A;  2KOP A;  2L9F A;  2CG5 B;  1AF8 A;  1NQ4 A;  2AFD A;  2K0Y A;  2JU1 A;  2KGD A;  2KGA A;  4PXH B;  5KP6 B;  4PWV B;  5HV8 A;  4H2Y C;  4BPF A;  2FHS C;  2K94 A;  2AVA A;  2GDY A;  2LL8 A;  4NEO A;  2FAE A;  1T8K A;  2N6Z A;  5EJD A;  2MF4 A;  3LMO A;  4R0M A;  2LOL A;  3NY7 B;  2EHS A;  2N6Y A;  2KR5 A;  1ACP A;  2K93 A;  4IZ6 A;  2N5H A;  2KWL A;  3EJD A;  3CE7 A;  2FAC A;  3EJE A;  2KW2 A;  2K92 A;  4DG9 A;  1DV5 A;  2EHT A;  2FQ1 A;  2L4B A;  2GDW A;  4BPH A;  2K0X A;  2FQ2 A;  2FVA A;  2CGQ A;  2X2B A;  2KG6 A;  2LPK A;  2LIW A;  2MVV A;  4BPG A;  5KP8 B;  3RG2 A;  2KOR A;  2KOQ A;  2MR8 A;  2KOO A;  3GZL A;  1OR5 A;  2MD9 A;  2N50 A;  2L22 A;  2ROQ A;  2JQ4 A;  2KOS A;  2PNG A;  2JU2 A;  2L0Q A;  2DNW A;  1HY8 A;  2FQ0 A;  2FVF A;  1KLP A;  1HQB A;  4H2W C;  2N98 A;  2FVE A;  2CQ8 A;  2FAD A;  2QNW A;  2N5I A;  1L0I A;  2KG8 A;  1F80 D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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