2KJAA

Chemical shift assignments, constraints, and coordinates for cn5 scorpion toxin
Total Genus 10
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
66
structure length
66
Chain Sequence
KEGYLVNKSTGCKYGCLLLGKNEGCDKECKAKNQGGSYGYCYAFGCWCEGLPESTPTYPLPNKSCS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Toxin
molecule keywords Beta-toxin Cn5
publication title Solution structure of Cn5, a crustacean toxin found in the venom of the scorpions Centruroides noxius and Centruroides suffusus suffusus.
pubmed doi rcsb
total genus 10
structure length 66
sequence length 66
ec nomenclature
pdb deposition date 2009-05-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00537 Toxin_3 Scorpion toxin-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.30.10 Alpha Beta 2-Layer Sandwich Defensin A-like Knottin, scorpion toxin-like 2kjaA00
1ICAA 2KYQA 4HHFA 1PTXA 2I61A 2LI7A 1JXCA 2N69A 1CHZA 3PSMA 4CQKA 2KBKA 2B68A 2M8BB 1I6FA 1LQIA 1T7EA 1ZUTA 1I6GA 2KGQA 2KSKA 1T7AA 2KBJA 2KPYA 1FH3A 1C55A 2YBRC 1N4NA 1GPSA 1KV0A 1AHOA 2E3GA 1ZVEA 1BRZA 2NY8X 2A7TA 1WMTA 2LT8A 2E0HA 5KK4A 1NPIA 1NRBA 1NRAA 2YEOA 1PX9A 2NY9X 2ATBA 1AYJA 2N2RA 1ZVGA 1MYNA 1ZFUA 1B7DA 1LQQA 4V1DC 4KYPA 2B3CA 4AEIA 3E7RL 4HE7A 1ZYWA 1SEGA 1CN2A 1ZU3A 2E3FA 1LQHA 2BRZA 1L4VA 1NE5A 1PE4A 2N66A 1TI5A 1NH5A 2YC1C 1I2UA 1T1TA 1T0ZA 1BMRA 1WT7A 1SN4A 1MR4A 1VNAA 4AAZA 4AB0A 1WWNA 2SN3A 2LY6A 1BK8A 1GPTA 1P0AA 2MZ0A 1OZZA 1VNBA 1P00A 1JZAA 2N2QA 2GL1A 1BCGA 2KJAA 1JKZA 4UJ0A 1B3CA 1DQ7A 1SNBA 2ASCA 2LJ7A 2LKBA 1I2VA 1SN1A 1DJTA 1OMYA 2LY5A 5CY0A 1JZBA 1C56A 2LJMA 1ZYVA 1T7BA 2KBHA 2LR3A 3E7UX
chains in the Genus database with same CATH superfamily
3KP0A 5AQTA 1ICAA 2KYQA 2V7ZA 3BK3C 1NGCA 3KVGA 4HHFA 1PTXA 2I61A 1ATRA 1JXCA 2LI7A 2N69A 1CHZA 3PSMA 3D2EB 4CQKA 1POIA 2G2KA 5AQIA 2KBKA 2B68A 4HWIA 1NGEA 2M8BB 4H5VA 3FZMA 1K8BA 1I6FA 1LQIA 1QQOA 3FZKA 2YIPA 1T7EA 1ZUTA 3ATVA 5AQZA 5BN9A 1I6GA 2QWRA 3C7NB 2KGQA 1NGIA 1QQMA 2KSKA 1T7AA 3L4IA 2MBKA 5AQOA 5BPNA 2KBJA 5F2RA 2KPYA 1FH3A 1C55A 2YBRC 1N4NA 1NGGA 1GPSA 5EY4A 3IUCA 3QFUA 1HPMA 1KV0A 5AQKA 1AHOA 2E3GA 3SF4D 4KBOA 1KAZA 5FPMA 1ZVEA 1BA1A 3FZLA 2D56A 1BRZA 2KHOA 2NY8X 2A7TA 5AR0A 3D2FB 1WMTA 2LT8A 5AQYA 5AQGA 2E0HA 2MN5A 5KK4A 3LDOA 1NPIA 2LN8A 2QWMA 1XRSB 1BUPA 1NRBA 1S3XA 1NRAA 1NGDA 5AQLA 3LDQA 3KHWA 4H5WA 1NGJA 2YEOA 1PX9A 2NY9X 2ATBA 3KOXA 2N2RA 1ZVGA 1MYNA 3KOYA 1ZFUA 3L6QA 5AQMA 1HX1A 3KP1A 1B7DA 3ATUA 1LQQA 4FSVA 4V1DC 4H5RA 3FZHA 3QMLA 3QI7A 2K35A 2QWPA 5FPEA 4IO8A 3KOWA 4KYPA 5AQJA 5EVZA 2B3CA 4H5TA 3GKUA 4AEIA 2YIOA 2VY6A 3E7RL 3LDNA 2QWOA 3QFPA 4UADE 4HE7A 1ZYWA 1SEGA 1NGBA 1CN2A 4UAFE 5AQNA 1ZU3A 2E3FA 5AQHA 1LQHA 2BRZA 4H5NA 1QQNA 3HSCA 1L4VA 1NE5A 1PE4A 2JDQD 3R2VA 3GDQA 2N66A 1TI5A 1NH5A 1I2UA 1UGLA 2E2FA 2QWQA 1T1TA 1T0ZA 2YC1C 4UAEF 2E8AA 4GNIA 1BMRA 1DKGD 1WT7A 5AQXA 2YILA 3KC6A 1SN4A 1YUWA 1AYJA 1NGFA 1NGAA 1MR4A 1VNAA 2QXLA 3CW4A 1KAYA 4AAZA 5BPMA 2QW9A 4AB0A 5AQUA 3I33A 5AQQA 5EXWA 1WWNA 3FE1A 2GMOA 2QWNA 3KOZA 3AY9A 2SN3A 2LY6A 3D2EA 5FPNA 1BK8A 1GPTA 1P0AA 2MZ0A 3LDPA 1OZZA 1VNBA 1P00A 1HJOA 1JZAA 5AQSA 2N2QA 1KAXA 2GL1A 1BCGA 2KJAA 3L56A 1BA0A 3CQXA 4UJ0A 1B3CA 1JKZA 1DQ7A 5AQWA 1SNBA 5AQFA 2ASCA 5EX5A 3FZFA 2LJ7A 3C7NA 3JXUA 5FPDA 2LKBA 2E88A 5BPLA 5AQVA 1I2VA 1SN1A 1DJTA 2BUPA 3M3ZA 5AQRA 1OMYA 2LY5A 3A8YA 5CY0A 1JZBA 1C56A 1NGHA 2LJMA 4FL9A 5AQPA 5F1XA 5F0XA 3LDLA 2QWLA 1ZYVA 1ATSA 5BN8A 1T7BA 3D2FA 2KBHA 2LR3A 3E7UX 3GL1A
chains in the Genus database with same CATH topology
1ICAA 2KYQA 4HHFA 1PTXA 2I61A 2LI7A 1JXCA 2N69A 1CHZA 3PSMA 4CQKA 2KBKA 2B68A 2M8BB 1I6FA 1LQIA 1T7EA 1ZUTA 1I6GA 2KGQA 2KSKA 1T7AA 2KBJA 2KPYA 1FH3A 1C55A 2YBRC 1N4NA 1GPSA 1KV0A 1AHOA 2E3GA 1ZVEA 1BRZA 2NY8X 2A7TA 1WMTA 2LT8A 2E0HA 5KK4A 1NPIA 1NRBA 1NRAA 2YEOA 1PX9A 2NY9X 2ATBA 1AYJA 2N2RA 1ZVGA 1MYNA 1ZFUA 1B7DA 1LQQA 4V1DC 4KYPA 2B3CA 4AEIA 3E7RL 4HE7A 1ZYWA 1SEGA 1CN2A 1ZU3A 2E3FA 1LQHA 2BRZA 1L4VA 1NE5A 1PE4A 2N66A 1TI5A 1NH5A 2YC1C 1I2UA 1T1TA 1T0ZA 1BMRA 1WT7A 1SN4A 1MR4A 1VNAA 4AAZA 4AB0A 1WWNA 2SN3A 2LY6A 1BK8A 1GPTA 1P0AA 2MZ0A 1OZZA 1VNBA 1P00A 1JZAA 2N2QA 2GL1A 1BCGA 2KJAA 1JKZA 4UJ0A 1B3CA 1DQ7A 1SNBA 2ASCA 2LJ7A 2LKBA 1I2VA 1SN1A 1DJTA 1OMYA 2LY5A 5CY0A 1JZBA 1C56A 2LJMA 1ZYVA 1T7BA 2KBHA 2LR3A 3E7UX
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ICA A;  2KYQ A;  4HHF A;  1PTX A;  2I61 A;  2LI7 A;  1JXC A;  2N69 A;  1CHZ A;  3PSM A;  4CQK A;  2KBK A;  2B68 A;  2M8B B;  1I6F A;  1LQI A;  1T7E A;  1ZUT A;  1I6G A;  2KGQ A;  2KSK A;  1T7A A;  2KBJ A;  2KPY A;  1FH3 A;  1C55 A;  2YBR C;  1N4N A;  1GPS A;  1KV0 A;  1AHO A;  2E3G A;  1ZVE A;  1BRZ A;  2NY8 X;  2A7T A;  1WMT A;  2LT8 A;  2E0H A;  5KK4 A;  1NPI A;  1NRB A;  1NRA A;  2YEO A;  1PX9 A;  2NY9 X;  2ATB A;  1AYJ A;  2N2R A;  1ZVG A;  1MYN A;  1ZFU A;  1B7D A;  1LQQ A;  4V1D C;  4KYP A;  2B3C A;  4AEI A;  3E7R L;  4HE7 A;  1ZYW A;  1SEG A;  1CN2 A;  1ZU3 A;  2E3F A;  1LQH A;  2BRZ A;  1L4V A;  1NE5 A;  1PE4 A;  2N66 A;  1TI5 A;  1NH5 A;  2YC1 C;  1I2U A;  1T1T A;  1T0Z A;  1BMR A;  1WT7 A;  1SN4 A;  1MR4 A;  1VNA A;  4AAZ A;  4AB0 A;  1WWN A;  2SN3 A;  2LY6 A;  1BK8 A;  1GPT A;  1P0A A;  2MZ0 A;  1OZZ A;  1VNB A;  1P00 A;  1JZA A;  2N2Q A;  2GL1 A;  1BCG A;  2KJA A;  1JKZ A;  4UJ0 A;  1B3C A;  1DQ7 A;  1SNB A;  2ASC A;  2LJ7 A;  2LKB A;  1I2V A;  1SN1 A;  1DJT A;  1OMY A;  2LY5 A;  5CY0 A;  1JZB A;  1C56 A;  2LJM A;  1ZYV A;  1T7B A;  2KBH A;  2LR3 A;  3E7U X; 
#chains in the Genus database with same CATH topology
 3KP0 A;  5AQT A;  1ICA A;  2KYQ A;  2V7Z A;  3BK3 C;  1NGC A;  3KVG A;  4HHF A;  1PTX A;  2I61 A;  1ATR A;  1JXC A;  2LI7 A;  2N69 A;  1CHZ A;  3PSM A;  3D2E B;  4CQK A;  1POI A;  2G2K A;  5AQI A;  2KBK A;  2B68 A;  4HWI A;  1NGE A;  2M8B B;  4H5V A;  3FZM A;  1K8B A;  1I6F A;  1LQI A;  1QQO A;  3FZK A;  2YIP A;  1T7E A;  1ZUT A;  3ATV A;  5AQZ A;  5BN9 A;  1I6G A;  2QWR A;  3C7N B;  2KGQ A;  1NGI A;  1QQM A;  2KSK A;  1T7A A;  3L4I A;  2MBK A;  5AQO A;  5BPN A;  2KBJ A;  5F2R A;  2KPY A;  1FH3 A;  1C55 A;  2YBR C;  1N4N A;  1NGG A;  1GPS A;  5EY4 A;  3IUC A;  3QFU A;  1HPM A;  1KV0 A;  5AQK A;  1AHO A;  2E3G A;  3SF4 D;  4KBO A;  1KAZ A;  5FPM A;  1ZVE A;  1BA1 A;  3FZL A;  2D56 A;  1BRZ A;  2KHO A;  2NY8 X;  2A7T A;  5AR0 A;  3D2F B;  1WMT A;  2LT8 A;  5AQY A;  5AQG A;  2E0H A;  2MN5 A;  5KK4 A;  3LDO A;  1NPI A;  2LN8 A;  2QWM A;  1XRS B;  1BUP A;  1NRB A;  1S3X A;  1NRA A;  1NGD A;  5AQL A;  3LDQ A;  3KHW A;  4H5W A;  1NGJ A;  2YEO A;  1PX9 A;  2NY9 X;  2ATB A;  3KOX A;  2N2R A;  1ZVG A;  1MYN A;  3KOY A;  1ZFU A;  3L6Q A;  5AQM A;  1HX1 A;  3KP1 A;  1B7D A;  3ATU A;  1LQQ A;  4FSV A;  4V1D C;  4H5R A;  3FZH A;  3QML A;  3QI7 A;  2K35 A;  2QWP A;  5FPE A;  4IO8 A;  3KOW A;  4KYP A;  5AQJ A;  5EVZ A;  2B3C A;  4H5T A;  3GKU A;  4AEI A;  2YIO A;  2VY6 A;  3E7R L;  3LDN A;  2QWO A;  3QFP A;  4UAD E;  4HE7 A;  1ZYW A;  1SEG A;  1NGB A;  1CN2 A;  4UAF E;  5AQN A;  1ZU3 A;  2E3F A;  5AQH A;  1LQH A;  2BRZ A;  4H5N A;  1QQN A;  3HSC A;  1L4V A;  1NE5 A;  1PE4 A;  2JDQ D;  3R2V A;  3GDQ A;  2N66 A;  1TI5 A;  1NH5 A;  1I2U A;  1UGL A;  2E2F A;  2QWQ A;  1T1T A;  1T0Z A;  2YC1 C;  4UAE F;  2E8A A;  4GNI A;  1BMR A;  1DKG D;  1WT7 A;  5AQX A;  2YIL A;  3KC6 A;  1SN4 A;  1YUW A;  1AYJ A;  1NGF A;  1NGA A;  1MR4 A;  1VNA A;  2QXL A;  3CW4 A;  1KAY A;  4AAZ A;  5BPM A;  2QW9 A;  4AB0 A;  5AQU A;  3I33 A;  5AQQ A;  5EXW A;  1WWN A;  3FE1 A;  2GMO A;  2QWN A;  3KOZ A;  3AY9 A;  2SN3 A;  2LY6 A;  3D2E A;  5FPN A;  1BK8 A;  1GPT A;  1P0A A;  2MZ0 A;  3LDP A;  1OZZ A;  1VNB A;  1P00 A;  1HJO A;  1JZA A;  5AQS A;  2N2Q A;  1KAX A;  2GL1 A;  1BCG A;  2KJA A;  3L56 A;  1BA0 A;  3CQX A;  4UJ0 A;  1B3C A;  1JKZ A;  1DQ7 A;  5AQW A;  1SNB A;  5AQF A;  2ASC A;  5EX5 A;  3FZF A;  2LJ7 A;  3C7N A;  3JXU A;  5FPD A;  2LKB A;  2E88 A;  5BPL A;  5AQV A;  1I2V A;  1SN1 A;  1DJT A;  2BUP A;  3M3Z A;  5AQR A;  1OMY A;  2LY5 A;  3A8Y A;  5CY0 A;  1JZB A;  1C56 A;  1NGH A;  2LJM A;  4FL9 A;  5AQP A;  5F1X A;  5F0X A;  3LDL A;  2QWL A;  1ZYV A;  1ATS A;  5BN8 A;  1T7B A;  3D2F A;  2KBH A;  2LR3 A;  3E7U X;  3GL1 A; 
#chains in the Genus database with same CATH homology
 1ICA A;  2KYQ A;  4HHF A;  1PTX A;  2I61 A;  2LI7 A;  1JXC A;  2N69 A;  1CHZ A;  3PSM A;  4CQK A;  2KBK A;  2B68 A;  2M8B B;  1I6F A;  1LQI A;  1T7E A;  1ZUT A;  1I6G A;  2KGQ A;  2KSK A;  1T7A A;  2KBJ A;  2KPY A;  1FH3 A;  1C55 A;  2YBR C;  1N4N A;  1GPS A;  1KV0 A;  1AHO A;  2E3G A;  1ZVE A;  1BRZ A;  2NY8 X;  2A7T A;  1WMT A;  2LT8 A;  2E0H A;  5KK4 A;  1NPI A;  1NRB A;  1NRA A;  2YEO A;  1PX9 A;  2NY9 X;  2ATB A;  1AYJ A;  2N2R A;  1ZVG A;  1MYN A;  1ZFU A;  1B7D A;  1LQQ A;  4V1D C;  4KYP A;  2B3C A;  4AEI A;  3E7R L;  4HE7 A;  1ZYW A;  1SEG A;  1CN2 A;  1ZU3 A;  2E3F A;  1LQH A;  2BRZ A;  1L4V A;  1NE5 A;  1PE4 A;  2N66 A;  1TI5 A;  1NH5 A;  2YC1 C;  1I2U A;  1T1T A;  1T0Z A;  1BMR A;  1WT7 A;  1SN4 A;  1MR4 A;  1VNA A;  4AAZ A;  4AB0 A;  1WWN A;  2SN3 A;  2LY6 A;  1BK8 A;  1GPT A;  1P0A A;  2MZ0 A;  1OZZ A;  1VNB A;  1P00 A;  1JZA A;  2N2Q A;  2GL1 A;  1BCG A;  2KJA A;  1JKZ A;  4UJ0 A;  1B3C A;  1DQ7 A;  1SNB A;  2ASC A;  2LJ7 A;  2LKB A;  1I2V A;  1SN1 A;  1DJT A;  1OMY A;  2LY5 A;  5CY0 A;  1JZB A;  1C56 A;  2LJM A;  1ZYV A;  1T7B A;  2KBH A;  2LR3 A;  3E7U X; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...