2KMVA

Solution structure of the nucleotide binding domain of the human menkes protein in the atp-free form
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
185
structure length
185
Chain Sequence
SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKYCKQELDTETLGTCIDFQVVPGCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLVINNDVNDFMTEHERKGRTAVLVAVDDELCGLIAIADT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords Copper-transporting ATPase 1
publication title The binding mode of ATP revealed by the solution structure of the N-domain of human ATP7A.
pubmed doi rcsb
source organism Homo sapiens
total genus 35
structure length 185
sequence length 185
ec nomenclature ec 7.2.2.8: P-type Cu(+) transporter.
pdb deposition date 2009-08-05
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1110.10 Alpha Beta 3-Layer(aba) Sandwich Calcium-transporting ATPase, cytoplasmic domain N Calcium-transporting ATPase, cytoplasmic domain N 2kmvA01
2DQSA 5AW7A 1SU4A 3AR4A 2YFYA 4UU0A 2EAUA 3W5CA 5AW5A 4XE5A 1VFPA 3A1CA 3N8GA 4YCLA 4NABA 3NALA 2C8LA 2C9MA 2A29A 5AW1A 3FPSA 3W5BA 3SKXA 5AW4A 1SVJA 3WGUA 2YJ3A 1U7QA 4BBJA 5AVYA 1T5SA 4HYTA 5AVVA 5AVUA 3NANA 5AW9A 5AW2A 3W5AA 1XP5A 2EATA 2O9JA 1IWOA 5AW8A 4YCMA 5AVTA 4RESA 4KYTA 3AR5A 3A1EA 3AR7A 3AR8A 2YJ5A 2A00A 3AR9A 5A3QA 4UMVA 4BEVA 2ARFA 5AVSA 3GWIA 2EARA 3A3YA 3AR6A 3N5KA 4H1WA 3B9BA 5AVXA 4RETA 4BYGA 3BA6A 2YJ4A 5AVZA 3AR3A 4Y3UA 3NAMA 1MO7A 5AW0A 2C88A 3FGOA 1Q3IA 5A3SA 5AVWA 3B9RA 1WPGA 2C8KA 3W5DA 3B8EA 2ZBFA 3J7TA 3A1DA 4BEWA 2ZXEA 3AR2A 2B8EA 4UU1A 1T5TA 3FPBA 5AW6A 5AVRA 5AVQA 2ZBDA 2YJ6A 2AGVA 3TLMA 2KMVA 3KDPA 3SKYA 2KMXA 2OA0A 4YCNA 4XOUA 5A3RA 2BY4A 2IYEA 2ZBGA 4J2TA 2ZBEA 3WGVA 5AW3A 3RFUA 1MO8A
chains in the Genus database with same CATH superfamily
2DQSA 5AW7A 1SU4A 3AR4A 2YFYA 4UU0A 2EAUA 3W5CA 5AW5A 4XE5A 1VFPA 3A1CA 3N8GA 4YCLA 4NABA 3NALA 2C8LA 2C9MA 2A29A 5AW1A 3FPSA 3W5BA 3SKXA 5AW4A 1SVJA 3WGUA 2YJ3A 1U7QA 4BBJA 5AVYA 1T5SA 4HYTA 5AVVA 5AVUA 3NANA 5AW9A 5AW2A 3W5AA 1XP5A 2EATA 2O9JA 1IWOA 5AW8A 4YCMA 5AVTA 4RESA 4KYTA 3AR5A 3A1EA 3AR7A 3AR8A 2YJ5A 2A00A 3AR9A 5A3QA 4UMVA 4BEVA 2ARFA 5AVSA 3GWIA 2EARA 3A3YA 3AR6A 3N5KA 4H1WA 3B9BA 5AVXA 4RETA 4BYGA 3BA6A 2YJ4A 5AVZA 3AR3A 4Y3UA 3NAMA 1MO7A 5AW0A 2C88A 3FGOA 1Q3IA 5A3SA 5AVWA 3B9RA 1WPGA 2C8KA 3W5DA 3B8EA 2ZBFA 3J7TA 3A1DA 4BEWA 2ZXEA 3AR2A 2B8EA 4UU1A 1T5TA 3FPBA 5AW6A 5AVRA 5AVQA 2ZBDA 2YJ6A 2AGVA 3TLMA 2KMVA 3KDPA 3SKYA 2KMXA 2OA0A 4YCNA 4XOUA 5A3RA 2BY4A 2IYEA 2ZBGA 4J2TA 2ZBEA 3WGVA 5AW3A 3RFUA 1MO8A
chains in the Genus database with same CATH topology
2DQSA 5AW7A 1SU4A 3AR4A 2YFYA 4UU0A 2EAUA 3W5CA 5AW5A 4XE5A 1VFPA 3A1CA 3N8GA 4YCLA 4NABA 3NALA 2C8LA 2C9MA 2A29A 5AW1A 3FPSA 3W5BA 3SKXA 5AW4A 1SVJA 3WGUA 2YJ3A 1U7QA 4BBJA 5AVYA 1T5SA 4HYTA 5AVVA 5AVUA 3NANA 5AW9A 5AW2A 3W5AA 1XP5A 2EATA 2O9JA 1IWOA 5AW8A 4YCMA 5AVTA 4RESA 4KYTA 3AR5A 3A1EA 3AR7A 3AR8A 2YJ5A 2A00A 3AR9A 5A3QA 4UMVA 4BEVA 2ARFA 5AVSA 3GWIA 2EARA 3A3YA 3AR6A 3N5KA 4H1WA 3B9BA 5AVXA 4RETA 4BYGA 3BA6A 2YJ4A 5AVZA 3AR3A 4Y3UA 3NAMA 1MO7A 5AW0A 2C88A 3FGOA 1Q3IA 5A3SA 5AVWA 3B9RA 1WPGA 2C8KA 3W5DA 3B8EA 2ZBFA 3J7TA 3A1DA 4BEWA 2ZXEA 3AR2A 2B8EA 4UU1A 1T5TA 3FPBA 5AW6A 5AVRA 5AVQA 2ZBDA 2YJ6A 2AGVA 3TLMA 2KMVA 3KDPA 3SKYA 2KMXA 2OA0A 4YCNA 4XOUA 5A3RA 2BY4A 2IYEA 2ZBGA 4J2TA 2ZBEA 3WGVA 5AW3A 3RFUA 1MO8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2DQS A;  5AW7 A;  1SU4 A;  3AR4 A;  2YFY A;  4UU0 A;  2EAU A;  3W5C A;  5AW5 A;  4XE5 A;  1VFP A;  3A1C A;  3N8G A;  4YCL A;  4NAB A;  3NAL A;  2C8L A;  2C9M A;  2A29 A;  5AW1 A;  3FPS A;  3W5B A;  3SKX A;  5AW4 A;  1SVJ A;  3WGU A;  2YJ3 A;  1U7Q A;  4BBJ A;  5AVY A;  1T5S A;  4HYT A;  5AVV A;  5AVU A;  3NAN A;  5AW9 A;  5AW2 A;  3W5A A;  1XP5 A;  2EAT A;  2O9J A;  1IWO A;  5AW8 A;  4YCM A;  5AVT A;  4RES A;  4KYT A;  3AR5 A;  3A1E A;  3AR7 A;  3AR8 A;  2YJ5 A;  2A00 A;  3AR9 A;  5A3Q A;  4UMV A;  4BEV A;  2ARF A;  5AVS A;  3GWI A;  2EAR A;  3A3Y A;  3AR6 A;  3N5K A;  4H1W A;  3B9B A;  5AVX A;  4RET A;  4BYG A;  3BA6 A;  2YJ4 A;  5AVZ A;  3AR3 A;  4Y3U A;  3NAM A;  1MO7 A;  5AW0 A;  2C88 A;  3FGO A;  1Q3I A;  5A3S A;  5AVW A;  3B9R A;  1WPG A;  2C8K A;  3W5D A;  3B8E A;  2ZBF A;  3J7T A;  3A1D A;  4BEW A;  2ZXE A;  3AR2 A;  2B8E A;  4UU1 A;  1T5T A;  3FPB A;  5AW6 A;  5AVR A;  5AVQ A;  2ZBD A;  2YJ6 A;  2AGV A;  3TLM A;  2KMV A;  3KDP A;  3SKY A;  2KMX A;  2OA0 A;  4YCN A;  4XOU A;  5A3R A;  2BY4 A;  2IYE A;  2ZBG A;  4J2T A;  2ZBE A;  3WGV A;  5AW3 A;  3RFU A;  1MO8 A; 
#chains in the Genus database with same CATH topology
 2DQS A;  5AW7 A;  1SU4 A;  3AR4 A;  2YFY A;  4UU0 A;  2EAU A;  3W5C A;  5AW5 A;  4XE5 A;  1VFP A;  3A1C A;  3N8G A;  4YCL A;  4NAB A;  3NAL A;  2C8L A;  2C9M A;  2A29 A;  5AW1 A;  3FPS A;  3W5B A;  3SKX A;  5AW4 A;  1SVJ A;  3WGU A;  2YJ3 A;  1U7Q A;  4BBJ A;  5AVY A;  1T5S A;  4HYT A;  5AVV A;  5AVU A;  3NAN A;  5AW9 A;  5AW2 A;  3W5A A;  1XP5 A;  2EAT A;  2O9J A;  1IWO A;  5AW8 A;  4YCM A;  5AVT A;  4RES A;  4KYT A;  3AR5 A;  3A1E A;  3AR7 A;  3AR8 A;  2YJ5 A;  2A00 A;  3AR9 A;  5A3Q A;  4UMV A;  4BEV A;  2ARF A;  5AVS A;  3GWI A;  2EAR A;  3A3Y A;  3AR6 A;  3N5K A;  4H1W A;  3B9B A;  5AVX A;  4RET A;  4BYG A;  3BA6 A;  2YJ4 A;  5AVZ A;  3AR3 A;  4Y3U A;  3NAM A;  1MO7 A;  5AW0 A;  2C88 A;  3FGO A;  1Q3I A;  5A3S A;  5AVW A;  3B9R A;  1WPG A;  2C8K A;  3W5D A;  3B8E A;  2ZBF A;  3J7T A;  3A1D A;  4BEW A;  2ZXE A;  3AR2 A;  2B8E A;  4UU1 A;  1T5T A;  3FPB A;  5AW6 A;  5AVR A;  5AVQ A;  2ZBD A;  2YJ6 A;  2AGV A;  3TLM A;  2KMV A;  3KDP A;  3SKY A;  2KMX A;  2OA0 A;  4YCN A;  4XOU A;  5A3R A;  2BY4 A;  2IYE A;  2ZBG A;  4J2T A;  2ZBE A;  3WGV A;  5AW3 A;  3RFU A;  1MO8 A; 
#chains in the Genus database with same CATH homology
 2DQS A;  5AW7 A;  1SU4 A;  3AR4 A;  2YFY A;  4UU0 A;  2EAU A;  3W5C A;  5AW5 A;  4XE5 A;  1VFP A;  3A1C A;  3N8G A;  4YCL A;  4NAB A;  3NAL A;  2C8L A;  2C9M A;  2A29 A;  5AW1 A;  3FPS A;  3W5B A;  3SKX A;  5AW4 A;  1SVJ A;  3WGU A;  2YJ3 A;  1U7Q A;  4BBJ A;  5AVY A;  1T5S A;  4HYT A;  5AVV A;  5AVU A;  3NAN A;  5AW9 A;  5AW2 A;  3W5A A;  1XP5 A;  2EAT A;  2O9J A;  1IWO A;  5AW8 A;  4YCM A;  5AVT A;  4RES A;  4KYT A;  3AR5 A;  3A1E A;  3AR7 A;  3AR8 A;  2YJ5 A;  2A00 A;  3AR9 A;  5A3Q A;  4UMV A;  4BEV A;  2ARF A;  5AVS A;  3GWI A;  2EAR A;  3A3Y A;  3AR6 A;  3N5K A;  4H1W A;  3B9B A;  5AVX A;  4RET A;  4BYG A;  3BA6 A;  2YJ4 A;  5AVZ A;  3AR3 A;  4Y3U A;  3NAM A;  1MO7 A;  5AW0 A;  2C88 A;  3FGO A;  1Q3I A;  5A3S A;  5AVW A;  3B9R A;  1WPG A;  2C8K A;  3W5D A;  3B8E A;  2ZBF A;  3J7T A;  3A1D A;  4BEW A;  2ZXE A;  3AR2 A;  2B8E A;  4UU1 A;  1T5T A;  3FPB A;  5AW6 A;  5AVR A;  5AVQ A;  2ZBD A;  2YJ6 A;  2AGV A;  3TLM A;  2KMV A;  3KDP A;  3SKY A;  2KMX A;  2OA0 A;  4YCN A;  4XOU A;  5A3R A;  2BY4 A;  2IYE A;  2ZBG A;  4J2T A;  2ZBE A;  3WGV A;  5AW3 A;  3RFU A;  1MO8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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