2KW2A

Solution nmr of the specialized acyl carrier protein (rpa2022) from rhodopseudomonas palustris, northeast structural genomics consortium target rpr324
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
101
structure length
101
Chain Sequence
MTSTFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAARIDELVAAKGALEHHHHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Specialized acyl carrier protein
publication title Structure of a specialized acyl carrier protein essential for lipid A biosynthesis with very long-chain fatty acids in open and closed conformations.
pubmed doi rcsb
source organism Rhodopseudomonas palustris
total genus 29
structure length 101
sequence length 101
ec nomenclature
pdb deposition date 2010-03-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kw2A00
2KG6A 2X2BA 2KOQA 2JU2A 2L0QA 2EHTA 2KOSA 2N6ZA 2QNWA 4IZ6A 2K2QA 2LIWA 2KG9A 4NEOA 1DNYA 2XZ0D 2MD9A 2K92A 1NQ4A 5KP6B 4HKGA 1OR5A 2JGPA 2JQ4A 4PXHB 2LOLA 3EJEA 3NY7B 2AFEA 2LPKA 3EJBA 1AF8A 2AF8A 2KGEA 2KGCA 2FVAA 2FADA 5HVCA 2FVEA 2FAEA 2CNRA 2K94A 2LMLA 2M5RA 4BPHA 5KP8B 2XZ1C 4BPFA 3CE7A 2K0YA 2MY5A 2AFDA 2K93A 2VSQA 2AVAA 4H2XC 1F80D 4CA3A 4DG9A 4H2YC 2MF4A 2KOPA 2N5HA 5EJDA 2KR5A 3GZMA 2L4BA 2CGQA 4MRTC 2MR8A 1KLPA 2GDXA 2CG5B 2KW2A 3GZLA 2L9FA 2CQ8A 2FVFA 1HQBA 2PNGA 4R0MA 2FQ2A 2KOOA 2LKIA 2DNWA 2N5IA 2GDWA 2JU1A 1L0HA 2KWLA 2N6YA 5KP7B 5CZDB 2LIUA 4BPGA 2LTEA 4PWVB 1HY8A 2FACA 4H2WC 1ACPA 2KGAA 2KGDA 2KORA 2GDYA 5HV8A 2EHSA 1DV5A 1T8KA 2K0XA 2N98A 2MVVA 3EJDA 2N50A 1L0IA 1VKUA 3RG2A 2FQ0A 2MR7A 2FHSC 2LL8A 2ROQA 2L22A 2MVUA 3LMOA 1X3OA 2FQ1A 2KG8A
chains in the Genus database with same CATH superfamily
1Q81Q 5JPAA 1KD1Q 3CMEP 4QKOA 1M90Q 1KC8Q 4COCA 2N6ZA 3HZQA 5HGLA 4U0BA 2OTJP 4PH0A 3E2DA 2GZEA 2L6EA 4HKGA 2JGPA 2AFEA 4XRQA 2AF8A 1QVFO 3DS2A 3G29A 3DS3A 1VQMP 4UHPB 3G1IA 4BPHA 5KP8B 2MY5A 2VSQA 2PEIA 1UNKA 2GYKA 5EJDA 3CXCO 3CCUP 2MF4A 2Z44A 2KR5A 2CGQA 2CWOA 2VLNA 4XROA 1W2BO 4GR6A 2FVFA 1HQBA 4R0MA 3CPWO 1M74A 2LKIA 2DNWA 3I56P 4PWVB 2QA4P 3G0VA 1EMVA 3CC7P 1BXIA 1DV5A 1T8KA 2VLQA 3DS0A 5HGOA 4XFXA 2N50A 2JYLA 1M6NA 3RG2A 3CCLP 1IMQA 1KQSO 2MR7A 2FHSC 2JB0A 1YIJP 2L22A 3GJNA 1YJ9P 2MVUA 1X3OA 3CCSP 3GKLC 1AYIA 2KOQA 3H47A 2L0QA 2QNWA 2K2QA 2JBGA 1IUQA 2MD9A 2K92A 2EG5A 2NO8A 1EOQA 5BS1A 2JQ4A 4PXHB 3EJEA 2E1MA 1AF8A 1VQLP 1YHQP 2KGCA 2FVAA 1E0HA 2FADA 3VRLC 5HVCA 2Z46A 2VLPA 2JAZA 2XZ1C 1Z6MA 2AFDA 3DPHA 2AVAA 4H2XC 1F80D 4XFZA 2KOPA 2GZFA 2ERHA 3RG6C 2MR8A 2K0DX 3G28A 1KLPA 2GDXA 3CCVP 2BUOA 3CCEP 2DGYA 2PENA 1BAJA 4QNBA 2PNGA 1Q82Q 2OTLP 2FQ2A 4GR2A 1L0HA 3CD6P 2N6YA 5KP7B 1RO0A 4BPGA 3CCQP 1ACPA 2OARA 3M1MA 3B5IA 1Q86Q 2K0XA 4WYMA 4U0FA 4IPYA 5F2KA 2JYGA 1VQ8P 1VQKP 5F2OA 2PY8A 4F37A 3DS4A 3I55P 1N8RQ 1JJ2O 4COPA 2ROQA 1M6EX 1K8AQ 1A43A 2X2BA 2JU2A 2KOSA 5HGMA 2LIWA 1K30A 1RO2A 2BHVA 2PEMA 1ZNVA 2M8PA 2XZ0D 3H4EA 1FR2A 1YJNP 1IMPA 1OR5A 2PEOA 1QRJA 2LOLA 3CC4P 2KGEA 2VLOA 3DS1A 1YJWP 5BS2A 1VQNP 2CNRA 2K94A 1VQ7P 2M8LA 4BPFA 2LF4A 1S72P 2K93A 4CA3A 4DG9A 3CMAP 4H2YC 2N5HA 4U0AA 2GZIA 3H0DA 3G1GA 2GZJA 1NJIQ 2Z45A 3G4SP 2L9FA 2CQ8A 4M0IA 1VHNA 3CCRP 3G26A 2KWLA 5CZDB 5F2NA 2QEXP 2FACA 4H2WC 1VQ9P 3NTEA 1K73Q 2K5XA 3DTJA 2WPTA 2KGAA 2KGDA 2GDYA 5HV8A 2EHSA 2EFJA 2N98A 3EJDA 1D1DA 1L0IA 2PEQA 5DCKA 1VKUA 2XXMA 2FQ0A 7CEIA 1YI2P 3U43A 2XT1A 3Q20A 2LL8A 4U0DA 1E6JP 2FQ1A 2KG6A 1MZ8A 3P05A 2EHTA 4IZ6A 3CC2P 1VQ6P 1VQOP 1VQ4P 2KG9A 4NEOA 1DNYA 1A8OA 1GPJA 1NQ4A 5I4TG 1ZMBA 1EIAA 5KP6B 3NY7B 3EJBA 2LPKA 2M8NA 2XV6A 2FVEA 1GXGA 5EW5E 3G71P 2FAEA 3B4QA 2LMLA 3G6EP 2M5RA 3CE7A 2K0YA 4U0CA 1VQPP 2P9XA 3LRYA 3GZMA 2PEJA 2PEKA 2L4BA 3MGEA 4MRTC 3HYBA 1Q7YQ 3DS5A 2CG5B 2KW2A 3GZLA 3CCMP 1K9MQ 2KOOA 2N5IA 2GDWA 2JU1A 2KODA 1UJZA 2GZGA 3OW2O 2LIUA 1AUMA 2LTEA 1HY8A 4PH1A 2JO0A 1QVGO 2KORA 2EIAA 1GXHA 1RNIA 1YITP 4U0EA 2MVVA 3G21A 3WBHA 3CCJP 1CEIA 1VQ5P 4XFYA 5HGNA 1M1KQ 3LMOA 2ONTA 2KG8A
chains in the Genus database with same CATH topology
2KG6A 2X2BA 2KOQA 2JU2A 2L0QA 2EHTA 2KOSA 2N6ZA 2QNWA 4IZ6A 2K2QA 2LIWA 2KG9A 4NEOA 1DNYA 2XZ0D 2MD9A 2K92A 1NQ4A 5KP6B 4HKGA 1OR5A 2JGPA 2JQ4A 4PXHB 2LOLA 3EJEA 3NY7B 2AFEA 2LPKA 3EJBA 1AF8A 2AF8A 2KGEA 2KGCA 2FVAA 2FADA 5HVCA 2FVEA 2FAEA 2CNRA 2K94A 2LMLA 2M5RA 4BPHA 5KP8B 2XZ1C 4BPFA 3CE7A 2K0YA 2MY5A 2AFDA 2K93A 2VSQA 2AVAA 4H2XC 1F80D 4CA3A 4DG9A 4H2YC 2MF4A 2KOPA 2N5HA 5EJDA 2KR5A 3GZMA 2L4BA 2CGQA 4MRTC 2MR8A 1KLPA 2GDXA 2CG5B 2KW2A 3GZLA 2L9FA 2CQ8A 2FVFA 1HQBA 2PNGA 4R0MA 2FQ2A 2KOOA 2LKIA 2DNWA 2N5IA 2GDWA 2JU1A 1L0HA 2KWLA 2N6YA 5KP7B 5CZDB 2LIUA 4BPGA 2LTEA 4PWVB 1HY8A 2FACA 4H2WC 1ACPA 2KGAA 2KGDA 2KORA 2GDYA 5HV8A 2EHSA 1DV5A 1T8KA 2K0XA 2N98A 2MVVA 3EJDA 2N50A 1L0IA 1VKUA 3RG2A 2FQ0A 2MR7A 2FHSC 2LL8A 2ROQA 2L22A 2MVUA 3LMOA 1X3OA 2FQ1A 2KG8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KG6 A;  2X2B A;  2KOQ A;  2JU2 A;  2L0Q A;  2EHT A;  2KOS A;  2N6Z A;  2QNW A;  4IZ6 A;  2K2Q A;  2LIW A;  2KG9 A;  4NEO A;  1DNY A;  2XZ0 D;  2MD9 A;  2K92 A;  1NQ4 A;  5KP6 B;  4HKG A;  1OR5 A;  2JGP A;  2JQ4 A;  4PXH B;  2LOL A;  3EJE A;  3NY7 B;  2AFE A;  2LPK A;  3EJB A;  1AF8 A;  2AF8 A;  2KGE A;  2KGC A;  2FVA A;  2FAD A;  5HVC A;  2FVE A;  2FAE A;  2CNR A;  2K94 A;  2LML A;  2M5R A;  4BPH A;  5KP8 B;  2XZ1 C;  4BPF A;  3CE7 A;  2K0Y A;  2MY5 A;  2AFD A;  2K93 A;  2VSQ A;  2AVA A;  4H2X C;  1F80 D;  4CA3 A;  4DG9 A;  4H2Y C;  2MF4 A;  2KOP A;  2N5H A;  5EJD A;  2KR5 A;  3GZM A;  2L4B A;  2CGQ A;  4MRT C;  2MR8 A;  1KLP A;  2GDX A;  2CG5 B;  2KW2 A;  3GZL A;  2L9F A;  2CQ8 A;  2FVF A;  1HQB A;  2PNG A;  4R0M A;  2FQ2 A;  2KOO A;  2LKI A;  2DNW A;  2N5I A;  2GDW A;  2JU1 A;  1L0H A;  2KWL A;  2N6Y A;  5KP7 B;  5CZD B;  2LIU A;  4BPG A;  2LTE A;  4PWV B;  1HY8 A;  2FAC A;  4H2W C;  1ACP A;  2KGA A;  2KGD A;  2KOR A;  2GDY A;  5HV8 A;  2EHS A;  1DV5 A;  1T8K A;  2K0X A;  2N98 A;  2MVV A;  3EJD A;  2N50 A;  1L0I A;  1VKU A;  3RG2 A;  2FQ0 A;  2MR7 A;  2FHS C;  2LL8 A;  2ROQ A;  2L22 A;  2MVU A;  3LMO A;  1X3O A;  2FQ1 A;  2KG8 A; 
#chains in the Genus database with same CATH topology
 1Q81 Q;  5JPA A;  1KD1 Q;  3CME P;  4QKO A;  1M90 Q;  1KC8 Q;  4COC A;  2N6Z A;  3HZQ A;  5HGL A;  4U0B A;  2OTJ P;  4PH0 A;  3E2D A;  2GZE A;  2L6E A;  4HKG A;  2JGP A;  2AFE A;  4XRQ A;  2AF8 A;  1QVF O;  3DS2 A;  3G29 A;  3DS3 A;  1VQM P;  4UHP B;  3G1I A;  4BPH A;  5KP8 B;  2MY5 A;  2VSQ A;  2PEI A;  1UNK A;  2GYK A;  5EJD A;  3CXC O;  3CCU P;  2MF4 A;  2Z44 A;  2KR5 A;  2CGQ A;  2CWO A;  2VLN A;  4XRO A;  1W2B O;  4GR6 A;  2FVF A;  1HQB A;  4R0M A;  3CPW O;  1M74 A;  2LKI A;  2DNW A;  3I56 P;  4PWV B;  2QA4 P;  3G0V A;  1EMV A;  3CC7 P;  1BXI A;  1DV5 A;  1T8K A;  2VLQ A;  3DS0 A;  5HGO A;  4XFX A;  2N50 A;  2JYL A;  1M6N A;  3RG2 A;  3CCL P;  1IMQ A;  1KQS O;  2MR7 A;  2FHS C;  2JB0 A;  1YIJ P;  2L22 A;  3GJN A;  1YJ9 P;  2MVU A;  1X3O A;  3CCS P;  3GKL C;  1AYI A;  2KOQ A;  3H47 A;  2L0Q A;  2QNW A;  2K2Q A;  2JBG A;  1IUQ A;  2MD9 A;  2K92 A;  2EG5 A;  2NO8 A;  1EOQ A;  5BS1 A;  2JQ4 A;  4PXH B;  3EJE A;  2E1M A;  1AF8 A;  1VQL P;  1YHQ P;  2KGC A;  2FVA A;  1E0H A;  2FAD A;  3VRL C;  5HVC A;  2Z46 A;  2VLP A;  2JAZ A;  2XZ1 C;  1Z6M A;  2AFD A;  3DPH A;  2AVA A;  4H2X C;  1F80 D;  4XFZ A;  2KOP A;  2GZF A;  2ERH A;  3RG6 C;  2MR8 A;  2K0D X;  3G28 A;  1KLP A;  2GDX A;  3CCV P;  2BUO A;  3CCE P;  2DGY A;  2PEN A;  1BAJ A;  4QNB A;  2PNG A;  1Q82 Q;  2OTL P;  2FQ2 A;  4GR2 A;  1L0H A;  3CD6 P;  2N6Y A;  5KP7 B;  1RO0 A;  4BPG A;  3CCQ P;  1ACP A;  2OAR A;  3M1M A;  3B5I A;  1Q86 Q;  2K0X A;  4WYM A;  4U0F A;  4IPY A;  5F2K A;  2JYG A;  1VQ8 P;  1VQK P;  5F2O A;  2PY8 A;  4F37 A;  3DS4 A;  3I55 P;  1N8R Q;  1JJ2 O;  4COP A;  2ROQ A;  1M6E X;  1K8A Q;  1A43 A;  2X2B A;  2JU2 A;  2KOS A;  5HGM A;  2LIW A;  1K30 A;  1RO2 A;  2BHV A;  2PEM A;  1ZNV A;  2M8P A;  2XZ0 D;  3H4E A;  1FR2 A;  1YJN P;  1IMP A;  1OR5 A;  2PEO A;  1QRJ A;  2LOL A;  3CC4 P;  2KGE A;  2VLO A;  3DS1 A;  1YJW P;  5BS2 A;  1VQN P;  2CNR A;  2K94 A;  1VQ7 P;  2M8L A;  4BPF A;  2LF4 A;  1S72 P;  2K93 A;  4CA3 A;  4DG9 A;  3CMA P;  4H2Y C;  2N5H A;  4U0A A;  2GZI A;  3H0D A;  3G1G A;  2GZJ A;  1NJI Q;  2Z45 A;  3G4S P;  2L9F A;  2CQ8 A;  4M0I A;  1VHN A;  3CCR P;  3G26 A;  2KWL A;  5CZD B;  5F2N A;  2QEX P;  2FAC A;  4H2W C;  1VQ9 P;  3NTE A;  1K73 Q;  2K5X A;  3DTJ A;  2WPT A;  2KGA A;  2KGD A;  2GDY A;  5HV8 A;  2EHS A;  2EFJ A;  2N98 A;  3EJD A;  1D1D A;  1L0I A;  2PEQ A;  5DCK A;  1VKU A;  2XXM A;  2FQ0 A;  7CEI A;  1YI2 P;  3U43 A;  2XT1 A;  3Q20 A;  2LL8 A;  4U0D A;  1E6J P;  2FQ1 A;  2KG6 A;  1MZ8 A;  3P05 A;  2EHT A;  4IZ6 A;  3CC2 P;  1VQ6 P;  1VQO P;  1VQ4 P;  2KG9 A;  4NEO A;  1DNY A;  1A8O A;  1GPJ A;  1NQ4 A;  5I4T G;  1ZMB A;  1EIA A;  5KP6 B;  3NY7 B;  3EJB A;  2LPK A;  2M8N A;  2XV6 A;  2FVE A;  1GXG A;  5EW5 E;  3G71 P;  2FAE A;  3B4Q A;  2LML A;  3G6E P;  2M5R A;  3CE7 A;  2K0Y A;  4U0C A;  1VQP P;  2P9X A;  3LRY A;  3GZM A;  2PEJ A;  2PEK A;  2L4B A;  3MGE A;  4MRT C;  3HYB A;  1Q7Y Q;  3DS5 A;  2CG5 B;  2KW2 A;  3GZL A;  3CCM P;  1K9M Q;  2KOO A;  2N5I A;  2GDW A;  2JU1 A;  2KOD A;  1UJZ A;  2GZG A;  3OW2 O;  2LIU A;  1AUM A;  2LTE A;  1HY8 A;  4PH1 A;  2JO0 A;  1QVG O;  2KOR A;  2EIA A;  1GXH A;  1RNI A;  1YIT P;  4U0E A;  2MVV A;  3G21 A;  3WBH A;  3CCJ P;  1CEI A;  1VQ5 P;  4XFY A;  5HGN A;  1M1K Q;  3LMO A;  2ONT A;  2KG8 A; 
#chains in the Genus database with same CATH homology
 2KG6 A;  2X2B A;  2KOQ A;  2JU2 A;  2L0Q A;  2EHT A;  2KOS A;  2N6Z A;  2QNW A;  4IZ6 A;  2K2Q A;  2LIW A;  2KG9 A;  4NEO A;  1DNY A;  2XZ0 D;  2MD9 A;  2K92 A;  1NQ4 A;  5KP6 B;  4HKG A;  1OR5 A;  2JGP A;  2JQ4 A;  4PXH B;  2LOL A;  3EJE A;  3NY7 B;  2AFE A;  2LPK A;  3EJB A;  1AF8 A;  2AF8 A;  2KGE A;  2KGC A;  2FVA A;  2FAD A;  5HVC A;  2FVE A;  2FAE A;  2CNR A;  2K94 A;  2LML A;  2M5R A;  4BPH A;  5KP8 B;  2XZ1 C;  4BPF A;  3CE7 A;  2K0Y A;  2MY5 A;  2AFD A;  2K93 A;  2VSQ A;  2AVA A;  4H2X C;  1F80 D;  4CA3 A;  4DG9 A;  4H2Y C;  2MF4 A;  2KOP A;  2N5H A;  5EJD A;  2KR5 A;  3GZM A;  2L4B A;  2CGQ A;  4MRT C;  2MR8 A;  1KLP A;  2GDX A;  2CG5 B;  2KW2 A;  3GZL A;  2L9F A;  2CQ8 A;  2FVF A;  1HQB A;  2PNG A;  4R0M A;  2FQ2 A;  2KOO A;  2LKI A;  2DNW A;  2N5I A;  2GDW A;  2JU1 A;  1L0H A;  2KWL A;  2N6Y A;  5KP7 B;  5CZD B;  2LIU A;  4BPG A;  2LTE A;  4PWV B;  1HY8 A;  2FAC A;  4H2W C;  1ACP A;  2KGA A;  2KGD A;  2KOR A;  2GDY A;  5HV8 A;  2EHS A;  1DV5 A;  1T8K A;  2K0X A;  2N98 A;  2MVV A;  3EJD A;  2N50 A;  1L0I A;  1VKU A;  3RG2 A;  2FQ0 A;  2MR7 A;  2FHS C;  2LL8 A;  2ROQ A;  2L22 A;  2MVU A;  3LMO A;  1X3O A;  2FQ1 A;  2KG8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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