2L4BA

Solution structure of a putative acyl carrier protein from anaplasma phagocytophilum. seattle structural genomics center for infectious disease target anpha.01018.a
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
88
structure length
88
Chain Sequence
PGSMVSEEIKAQVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRYIASKSSDA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Acyl carrier protein
publication title Solution structure of a putative acyl carrier protein from Anaplasma phagocytophilum. Seattle Structural Genomics Center for Infectious Disease target AnphA.01018.a
rcsb
source organism Anaplasma phagocytophilum
total genus 21
structure length 88
sequence length 88
ec nomenclature
pdb deposition date 2010-10-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2l4bA00
2DNWA 5HVCA 2K94A 2KGAA 2AFDA 4H2XC 2FADA 2L22A 2L4BA 3CE7A 3NY7B 2XZ0D 3RG2A 2LOLA 1KLPA 4NEOA 2LMLA 2K93A 1VKUA 2MR7A 2CNRA 1AF8A 2AF8A 2LTEA 3EJBA 2K0YA 2LKIA 2MVVA 1NQ4A 2L0QA 2KG8A 4BPFA 1OR5A 4R0MA 2MVUA 1L0IA 2N50A 1T8KA 2KWLA 2LPKA 2MY5A 2KOQA 2KOPA 2N5HA 2GDXA 4PXHB 2VSQA 2AFEA 4IZ6A 2FQ2A 2ROQA 2X2BA 2KGEA 2QNWA 4H2YC 3EJDA 2M5RA 2KOOA 2MF4A 2FVFA 2KW2A 1X3OA 2K2QA 3GZMA 1DNYA 4PWVB 1DV5A 2CGQA 1HQBA 2KORA 2KGDA 4BPHA 2AVAA 2JQ4A 2GDYA 1L0HA 2JU1A 4MRTC 2PNGA 2KG9A 1ACPA 2FACA 5EJDA 2FHSC 3EJEA 5HV8A 2K0XA 2FQ1A 4CA3A 2CG5B 4HKGA 2FQ0A 2KR5A 2N6ZA 3GZLA 2FVAA 2N6YA 3LMOA 5KP6B 5CZDB 4H2WC 2LL8A 2JGPA 2GDWA 2EHSA 1HY8A 2FVEA 2N98A 5KP8B 4DG9A 5KP7B 2XZ1C 2KG6A 2LIUA 4BPGA 2JU2A 2CQ8A 2N5IA 2K92A 2LIWA 2KGCA 2KOSA 1F80D 2FAEA 2EHTA 2MD9A 2MR8A 2L9FA
chains in the Genus database with same CATH superfamily
2XV6A 1GXHA 2K94A 1VQ7P 3Q20A 3DS2A 1KQSO 3NY7B 3G21A 2M8NA 2LMLA 1MZ8A 2OTJP 3CCUP 2CNRA 2PEIA 1GPJA 3WBHA 4U0EA 2AF8A 3NTEA 1ZMBA 3EJBA 1NQ4A 3VRLC 2L0QA 5JPAA 2MY5A 2KOQA 2KOPA 4IZ6A 2FQ2A 1EMVA 2ROQA 4H2YC 3GKLC 1IMPA 1M6NA 2MF4A 3DS1A 1DNYA 5BS1A 1HQBA 2Z44A 2GYKA 4BPHA 2JQ4A 2PEQA 1L0HA 2PNGA 2KG9A 4XFXA 1ACPA 2FHSC 1E6JP 2GZGA 3EJEA 2KODA 1VQPP 5F2NA 2FQ0A 2KR5A 1W2BO 2FVAA 4WYMA 2GZIA 4XFYA 5CZDB 4F37A 4M0IA 3OW2O 2JGPA 2EHSA 1HY8A 5F2KA 2KG6A 3G1GA 2JYLA 4BPGA 2JU2A 2LF4A 3DS3A 3DTJA 2L6EA 3CC4P 2EHTA 3B5IA 3CC7P 2DNWA 5HVCA 2KGAA 3HZQA 2BUOA 1AYIA 3CCLP 5HGLA 4NEOA 3DS5A 1UNKA 2K93A 2XXMA 1VKUA 1YI2P 1AF8A 2ONTA 2JB0A 2LKIA 2MVVA 1Z6MA 3M1MA 7CEIA 4BPFA 2QA4P 3I55P 2N50A 3G29A 3H4EA 1T8KA 1K30A 1YIJP 1Q81Q 3CXCO 1M1KQ 2QNWA 2VLQA 3DPHA 3EJDA 2FVFA 1X3OA 1K8AQ 1DV5A 2VLOA 1VQ5P 1KD1Q 1VQKP 2FACA 2K0DX 4IPYA 2M8LA 1S72P 4PH0A 1Q86Q 1RNIA 2BHVA 4HKGA 1BAJA 2PENA 3H47A 1YJWP 1D1DA 3GZLA 3HYBA 1YHQP 5DCKA 2JYGA 2LL8A 3E2DA 1IMQA 3GJNA 1RO0A 2FVEA 5KP8B 1M90Q 3DS0A 2NO8A 2LIUA 3CCMP 2PEOA 1A43A 1VHNA 2N5IA 2K92A 3G28A 2LIWA 3LRYA 2KGCA 2KOSA 2MR8A 2PEJA 3CMEP 3DS4A 2FADA 3CCVP 1VQMP 3CE7A 3RG2A 1GXGA 3G26A 3G6EP 1VQOP 2WPTA 2LTEA 2VLNA 3CMAP 4R0MA 2MVUA 1QVFO 1JJ2O 4PH1A 1VQ9P 2N5HA 3CCJP 2GDXA 1BXIA 1A8OA 2JO0A 3U43A 1K73Q 1UJZA 1KC8Q 2M5RA 2KOOA 2KW2A 3GZMA 2QEXP 3CC2P 2VLPA 1EOQA 1EIAA 5I4TG 2GDYA 1VQ4P 2EFJA 1IUQA 1YJ9P 1RO2A 2OARA 1NJIQ 2XT1A 1FR2A 2K0XA 2FQ1A 5HGNA 2N6YA 4GR6A 5KP6B 2PEKA 2GDWA 4U0DA 4U0FA 1VQNP 2N98A 5KP7B 5F2OA 1QRJA 4XRQA 1N8RQ 3G0VA 4GR2A 2CQ8A 3CCQP 2CWOA 3CD6P 4QKOA 2MD9A 1VQLP 1ZNVA 2PEMA 2P9XA 4UHPB 2AFDA 4H2XC 2L22A 5HGOA 2L4BA 1YITP 2DGYA 1M74A 2XZ0D 2LOLA 5HGMA 3H0DA 1KLPA 2K5XA 4U0CA 3CCSP 2JBGA 2MR7A 1CEIA 2EIAA 3G4SP 1AUMA 2K0YA 2PY8A 2KG8A 1Q7YQ 1OR5A 1VQ6P 1L0IA 4XFZA 2KWLA 2LPKA 2GZFA 3MGEA 4QNBA 2Z46A 4PXHB 3G1IA 2VSQA 2AFEA 2X2BA 2KGEA 4U0BA 2OTLP 2GZEA 1Q82Q 2K2QA 4PWVB 3G71P 2CGQA 1K9MQ 2KORA 2KGDA 2AVAA 1QVGO 2JU1A 1YJNP 4MRTC 1E0HA 5EJDA 2Z45A 3CCEP 2EG5A 5HV8A 4CA3A 3P05A 2CG5B 4U0AA 2N6ZA 2GZJA 3LMOA 4COPA 4H2WC 3I56P 2JAZA 5EW5E 2ERHA 4DG9A 3CPWO 3CCRP 2XZ1C 4COCA 1VQ8P 5BS2A 3RG6C 3B4QA 1M6EX 1F80D 2M8PA 2FAEA 4XROA 2L9FA 2E1MA
chains in the Genus database with same CATH topology
2DNWA 5HVCA 2K94A 2KGAA 2AFDA 4H2XC 2FADA 2L22A 2L4BA 3CE7A 3NY7B 2XZ0D 3RG2A 2LOLA 1KLPA 4NEOA 2LMLA 2K93A 1VKUA 2MR7A 2CNRA 1AF8A 2AF8A 2LTEA 3EJBA 2K0YA 2LKIA 2MVVA 1NQ4A 2L0QA 2KG8A 4BPFA 1OR5A 4R0MA 2MVUA 1L0IA 2N50A 1T8KA 2KWLA 2LPKA 2MY5A 2KOQA 2KOPA 2N5HA 2GDXA 4PXHB 2VSQA 2AFEA 4IZ6A 2FQ2A 2ROQA 2X2BA 2KGEA 2QNWA 4H2YC 3EJDA 2M5RA 2KOOA 2MF4A 2FVFA 2KW2A 1X3OA 2K2QA 3GZMA 1DNYA 4PWVB 1DV5A 2CGQA 1HQBA 2KORA 2KGDA 4BPHA 2AVAA 2JQ4A 2GDYA 1L0HA 2JU1A 4MRTC 2PNGA 2KG9A 1ACPA 2FACA 5EJDA 2FHSC 3EJEA 5HV8A 2K0XA 2FQ1A 4CA3A 2CG5B 4HKGA 2FQ0A 2KR5A 2N6ZA 3GZLA 2FVAA 2N6YA 3LMOA 5KP6B 5CZDB 4H2WC 2LL8A 2JGPA 2GDWA 2EHSA 1HY8A 2FVEA 2N98A 5KP8B 4DG9A 5KP7B 2XZ1C 2KG6A 2LIUA 4BPGA 2JU2A 2CQ8A 2N5IA 2K92A 2LIWA 2KGCA 2KOSA 1F80D 2FAEA 2EHTA 2MD9A 2MR8A 2L9FA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2DNW A;  5HVC A;  2K94 A;  2KGA A;  2AFD A;  4H2X C;  2FAD A;  2L22 A;  2L4B A;  3CE7 A;  3NY7 B;  2XZ0 D;  3RG2 A;  2LOL A;  1KLP A;  4NEO A;  2LML A;  2K93 A;  1VKU A;  2MR7 A;  2CNR A;  1AF8 A;  2AF8 A;  2LTE A;  3EJB A;  2K0Y A;  2LKI A;  2MVV A;  1NQ4 A;  2L0Q A;  2KG8 A;  4BPF A;  1OR5 A;  4R0M A;  2MVU A;  1L0I A;  2N50 A;  1T8K A;  2KWL A;  2LPK A;  2MY5 A;  2KOQ A;  2KOP A;  2N5H A;  2GDX A;  4PXH B;  2VSQ A;  2AFE A;  4IZ6 A;  2FQ2 A;  2ROQ A;  2X2B A;  2KGE A;  2QNW A;  4H2Y C;  3EJD A;  2M5R A;  2KOO A;  2MF4 A;  2FVF A;  2KW2 A;  1X3O A;  2K2Q A;  3GZM A;  1DNY A;  4PWV B;  1DV5 A;  2CGQ A;  1HQB A;  2KOR A;  2KGD A;  4BPH A;  2AVA A;  2JQ4 A;  2GDY A;  1L0H A;  2JU1 A;  4MRT C;  2PNG A;  2KG9 A;  1ACP A;  2FAC A;  5EJD A;  2FHS C;  3EJE A;  5HV8 A;  2K0X A;  2FQ1 A;  4CA3 A;  2CG5 B;  4HKG A;  2FQ0 A;  2KR5 A;  2N6Z A;  3GZL A;  2FVA A;  2N6Y A;  3LMO A;  5KP6 B;  5CZD B;  4H2W C;  2LL8 A;  2JGP A;  2GDW A;  2EHS A;  1HY8 A;  2FVE A;  2N98 A;  5KP8 B;  4DG9 A;  5KP7 B;  2XZ1 C;  2KG6 A;  2LIU A;  4BPG A;  2JU2 A;  2CQ8 A;  2N5I A;  2K92 A;  2LIW A;  2KGC A;  2KOS A;  1F80 D;  2FAE A;  2EHT A;  2MD9 A;  2MR8 A;  2L9F A; 
#chains in the Genus database with same CATH topology
 2XV6 A;  1GXH A;  2K94 A;  1VQ7 P;  3Q20 A;  3DS2 A;  1KQS O;  3NY7 B;  3G21 A;  2M8N A;  2LML A;  1MZ8 A;  2OTJ P;  3CCU P;  2CNR A;  2PEI A;  1GPJ A;  3WBH A;  4U0E A;  2AF8 A;  3NTE A;  1ZMB A;  3EJB A;  1NQ4 A;  3VRL C;  2L0Q A;  5JPA A;  2MY5 A;  2KOQ A;  2KOP A;  4IZ6 A;  2FQ2 A;  1EMV A;  2ROQ A;  4H2Y C;  3GKL C;  1IMP A;  1M6N A;  2MF4 A;  3DS1 A;  1DNY A;  5BS1 A;  1HQB A;  2Z44 A;  2GYK A;  4BPH A;  2JQ4 A;  2PEQ A;  1L0H A;  2PNG A;  2KG9 A;  4XFX A;  1ACP A;  2FHS C;  1E6J P;  2GZG A;  3EJE A;  2KOD A;  1VQP P;  5F2N A;  2FQ0 A;  2KR5 A;  1W2B O;  2FVA A;  4WYM A;  2GZI A;  4XFY A;  5CZD B;  4F37 A;  4M0I A;  3OW2 O;  2JGP A;  2EHS A;  1HY8 A;  5F2K A;  2KG6 A;  3G1G A;  2JYL A;  4BPG A;  2JU2 A;  2LF4 A;  3DS3 A;  3DTJ A;  2L6E A;  3CC4 P;  2EHT A;  3B5I A;  3CC7 P;  2DNW A;  5HVC A;  2KGA A;  3HZQ A;  2BUO A;  1AYI A;  3CCL P;  5HGL A;  4NEO A;  3DS5 A;  1UNK A;  2K93 A;  2XXM A;  1VKU A;  1YI2 P;  1AF8 A;  2ONT A;  2JB0 A;  2LKI A;  2MVV A;  1Z6M A;  3M1M A;  7CEI A;  4BPF A;  2QA4 P;  3I55 P;  2N50 A;  3G29 A;  3H4E A;  1T8K A;  1K30 A;  1YIJ P;  1Q81 Q;  3CXC O;  1M1K Q;  2QNW A;  2VLQ A;  3DPH A;  3EJD A;  2FVF A;  1X3O A;  1K8A Q;  1DV5 A;  2VLO A;  1VQ5 P;  1KD1 Q;  1VQK P;  2FAC A;  2K0D X;  4IPY A;  2M8L A;  1S72 P;  4PH0 A;  1Q86 Q;  1RNI A;  2BHV A;  4HKG A;  1BAJ A;  2PEN A;  3H47 A;  1YJW P;  1D1D A;  3GZL A;  3HYB A;  1YHQ P;  5DCK A;  2JYG A;  2LL8 A;  3E2D A;  1IMQ A;  3GJN A;  1RO0 A;  2FVE A;  5KP8 B;  1M90 Q;  3DS0 A;  2NO8 A;  2LIU A;  3CCM P;  2PEO A;  1A43 A;  1VHN A;  2N5I A;  2K92 A;  3G28 A;  2LIW A;  3LRY A;  2KGC A;  2KOS A;  2MR8 A;  2PEJ A;  3CME P;  3DS4 A;  2FAD A;  3CCV P;  1VQM P;  3CE7 A;  3RG2 A;  1GXG A;  3G26 A;  3G6E P;  1VQO P;  2WPT A;  2LTE A;  2VLN A;  3CMA P;  4R0M A;  2MVU A;  1QVF O;  1JJ2 O;  4PH1 A;  1VQ9 P;  2N5H A;  3CCJ P;  2GDX A;  1BXI A;  1A8O A;  2JO0 A;  3U43 A;  1K73 Q;  1UJZ A;  1KC8 Q;  2M5R A;  2KOO A;  2KW2 A;  3GZM A;  2QEX P;  3CC2 P;  2VLP A;  1EOQ A;  1EIA A;  5I4T G;  2GDY A;  1VQ4 P;  2EFJ A;  1IUQ A;  1YJ9 P;  1RO2 A;  2OAR A;  1NJI Q;  2XT1 A;  1FR2 A;  2K0X A;  2FQ1 A;  5HGN A;  2N6Y A;  4GR6 A;  5KP6 B;  2PEK A;  2GDW A;  4U0D A;  4U0F A;  1VQN P;  2N98 A;  5KP7 B;  5F2O A;  1QRJ A;  4XRQ A;  1N8R Q;  3G0V A;  4GR2 A;  2CQ8 A;  3CCQ P;  2CWO A;  3CD6 P;  4QKO A;  2MD9 A;  1VQL P;  1ZNV A;  2PEM A;  2P9X A;  4UHP B;  2AFD A;  4H2X C;  2L22 A;  5HGO A;  2L4B A;  1YIT P;  2DGY A;  1M74 A;  2XZ0 D;  2LOL A;  5HGM A;  3H0D A;  1KLP A;  2K5X A;  4U0C A;  3CCS P;  2JBG A;  2MR7 A;  1CEI A;  2EIA A;  3G4S P;  1AUM A;  2K0Y A;  2PY8 A;  2KG8 A;  1Q7Y Q;  1OR5 A;  1VQ6 P;  1L0I A;  4XFZ A;  2KWL A;  2LPK A;  2GZF A;  3MGE A;  4QNB A;  2Z46 A;  4PXH B;  3G1I A;  2VSQ A;  2AFE A;  2X2B A;  2KGE A;  4U0B A;  2OTL P;  2GZE A;  1Q82 Q;  2K2Q A;  4PWV B;  3G71 P;  2CGQ A;  1K9M Q;  2KOR A;  2KGD A;  2AVA A;  1QVG O;  2JU1 A;  1YJN P;  4MRT C;  1E0H A;  5EJD A;  2Z45 A;  3CCE P;  2EG5 A;  5HV8 A;  4CA3 A;  3P05 A;  2CG5 B;  4U0A A;  2N6Z A;  2GZJ A;  3LMO A;  4COP A;  4H2W C;  3I56 P;  2JAZ A;  5EW5 E;  2ERH A;  4DG9 A;  3CPW O;  3CCR P;  2XZ1 C;  4COC A;  1VQ8 P;  5BS2 A;  3RG6 C;  3B4Q A;  1M6E X;  1F80 D;  2M8P A;  2FAE A;  4XRO A;  2L9F A;  2E1M A; 
#chains in the Genus database with same CATH homology
 2DNW A;  5HVC A;  2K94 A;  2KGA A;  2AFD A;  4H2X C;  2FAD A;  2L22 A;  2L4B A;  3CE7 A;  3NY7 B;  2XZ0 D;  3RG2 A;  2LOL A;  1KLP A;  4NEO A;  2LML A;  2K93 A;  1VKU A;  2MR7 A;  2CNR A;  1AF8 A;  2AF8 A;  2LTE A;  3EJB A;  2K0Y A;  2LKI A;  2MVV A;  1NQ4 A;  2L0Q A;  2KG8 A;  4BPF A;  1OR5 A;  4R0M A;  2MVU A;  1L0I A;  2N50 A;  1T8K A;  2KWL A;  2LPK A;  2MY5 A;  2KOQ A;  2KOP A;  2N5H A;  2GDX A;  4PXH B;  2VSQ A;  2AFE A;  4IZ6 A;  2FQ2 A;  2ROQ A;  2X2B A;  2KGE A;  2QNW A;  4H2Y C;  3EJD A;  2M5R A;  2KOO A;  2MF4 A;  2FVF A;  2KW2 A;  1X3O A;  2K2Q A;  3GZM A;  1DNY A;  4PWV B;  1DV5 A;  2CGQ A;  1HQB A;  2KOR A;  2KGD A;  4BPH A;  2AVA A;  2JQ4 A;  2GDY A;  1L0H A;  2JU1 A;  4MRT C;  2PNG A;  2KG9 A;  1ACP A;  2FAC A;  5EJD A;  2FHS C;  3EJE A;  5HV8 A;  2K0X A;  2FQ1 A;  4CA3 A;  2CG5 B;  4HKG A;  2FQ0 A;  2KR5 A;  2N6Z A;  3GZL A;  2FVA A;  2N6Y A;  3LMO A;  5KP6 B;  5CZD B;  4H2W C;  2LL8 A;  2JGP A;  2GDW A;  2EHS A;  1HY8 A;  2FVE A;  2N98 A;  5KP8 B;  4DG9 A;  5KP7 B;  2XZ1 C;  2KG6 A;  2LIU A;  4BPG A;  2JU2 A;  2CQ8 A;  2N5I A;  2K92 A;  2LIW A;  2KGC A;  2KOS A;  1F80 D;  2FAE A;  2EHT A;  2MD9 A;  2MR8 A;  2L9F A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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