2M5RA

Solution structure of holo-acyl carrier protein of leishmania major
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
80
structure length
80
Chain Sequence
MNDVLTRVLEVVKNFEKVDASKVTPESHFVKDLGLNSLDVVEVVFAIEQEFILDIPDHDAEKIQSIPDAVEYIAQNPMAK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lipid binding protein
molecule keywords Acyl carrier protein
publication title NMR structures of the apo- and holo- forms of the acyl carrier protein of Leishmania major
rcsb
source organism Leishmania major
total genus 19
structure length 80
sequence length 80
ec nomenclature
pdb deposition date 2013-03-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2m5rA00
3CE7A 1X3OA 2AF8A 2L9FA 4MRTC 2FQ2A 3NY7B 2KG6A 2EHTA 2FACA 2CNRA 2K93A 2LMLA 2KORA 2KOOA 2FVFA 2LOLA 5EJDA 2LIWA 5KP8B 2KGCA 2JQ4A 2JU2A 2L4BA 2KOSA 2GDWA 2PNGA 2QNWA 2AFDA 2FQ0A 5KP7B 2JGPA 4BPHA 4BPGA 2KG8A 2KOPA 2LIUA 1L0IA 2LKIA 2MVUA 2ROQA 2M5RA 2FHSC 3EJBA 3EJDA 2LTEA 2GDXA 5CZDB 2K0XA 2MY5A 2AVAA 2N6ZA 3RG2A 2N50A 2MVVA 4IZ6A 2XZ1C 2KWLA 2FAEA 2KGEA 4H2YC 1DNYA 2AFEA 2K92A 3GZMA 1T8KA 2KW2A 2KGDA 2N5IA 3EJEA 2FVEA 2KGAA 2DNWA 1KLPA 2CG5B 2CQ8A 1NQ4A 5KP6B 2LPKA 2L22A 4R0MA 2FADA 2N98A 4DG9A 2MF4A 5HVCA 2GDYA 2JU1A 1F80D 1AF8A 4PXHB 2K94A 4CA3A 1OR5A 1ACPA 2X2BA 2FVAA 4BPFA 2L0QA 2KG9A 2MR7A 4H2XC 2FQ1A 1VKUA 3LMOA 2MD9A 2VSQA 4HKGA 2N6YA 3GZLA 4NEOA 2MR8A 1L0HA 1DV5A 2EHSA 2XZ0D 2KOQA 4H2WC 2N5HA 2K0YA 2K2QA 4PWVB 1HY8A 5HV8A 2CGQA 2KR5A 1HQBA 2LL8A
chains in the Genus database with same CATH superfamily
1VHNA 2L9FA 3NY7B 2FACA 2K93A 2LMLA 3DS5A 4QNBA 1VQLP 2JQ4A 2JU2A 2GDWA 4PH1A 2PNGA 2FQ0A 3DS3A 2JYLA 2K5XA 4BPHA 2JB0A 2JBGA 1GXGA 1VQPP 3DS4A 3EJDA 3U43A 3M1MA 4IZ6A 2M8PA 4XRQA 1BXIA 4F37A 1M6EX 4U0EA 3G26A 1YJ9P 1RNIA 1QRJA 2KW2A 3HYBA 2GZIA 1GXHA 3RG6C 2CG5B 4XFYA 1VQ8P 2N98A 4DG9A 1GPJA 1F80D 1VQOP 4PXHB 1ZNVA 1E6JP 1OR5A 2X2BA 3DS2A 3GKLC 3G21A 5HGOA 3G4SP 4BPFA 1KC8Q 1VKUA 3LRYA 1BAJA 2GZGA 4HKGA 3CPWO 1QVFO 1K73Q 5HGNA 1IMQA 2Z44A 2BHVA 1RO2A 2JYGA 4COCA 3P05A 1RO0A 2K2QA 1M6NA 5JPAA 2CGQA 1UNKA 2KR5A 1CEIA 3CE7A 1E0HA 1YJWP 2XT1A 3H0DA 1VQ7P 2M8LA 1EMVA 2KORA 2VLNA 2L6EA 2PY8A 3CMEP 1Z6MA 1Q82Q 2KGCA 3E2DA 2KOSA 1VQ4P 1VQMP 2KOPA 2OARA 2M8NA 2FHSC 5CZDB 2PEQA 1A8OA 4U0CA 2N6ZA 2KWLA 1JJ2O 3G29A 4U0BA 2K92A 2KGDA 2N5IA 2FVEA 2PEOA 1EIAA 2DNWA 1QVGO 1K30A 1YHQP 2CQ8A 1M90Q 5BS1A 3GJNA 3G28A 3G0VA 2FADA 1MZ8A 2OTJP 4COPA 5HVCA 1AF8A 2K94A 4U0DA 4CA3A 2FVAA 2XV6A 3CCVP 3DTJA 2MD9A 2N6YA 1Q81Q 3DPHA 4NEOA 2MR8A 5F2OA 2P9XA 2XZ0D 2N5HA 2PEIA 2DGYA 3MGEA 5HV8A 2XXMA 1YITP 1HQBA 1VQ6P 4IPYA 2EG5A 1X3OA 4MRTC 3CCEP 2KG6A 4M0IA 2EHTA 1ZMBA 2PEJA 1IUQA 2FVFA 3H47A 5EJDA 2LIWA 1D1DA 5KP8B 2KODA 2AFDA 1Q7YQ 2CWOA 3Q20A 4XFZA 3H4EA 1AYIA 1IMPA 1K9MQ 2WPTA 5HGMA 2ONTA 2VLOA 1VQNP 2E1MA 4BPGA 2KG8A 3CD6P 1L0IA 3EJBA 2GDXA 3WBHA 2MY5A 2AVAA 2JAZA 2MVVA 2XZ1C 1S72P 4UHPB 1VQKP 2AFEA 2K0DX 3DS1A 1YJNP 1T8KA 5F2NA 3HZQA 2EFJA 1KLPA 5BS2A 2LPKA 2LF4A 2NO8A 3CCQP 2GZEA 2MF4A 3CCJP 3G1IA 2GDYA 3CCUP 3G1GA 1NJIQ 3CCSP 3I56P 3DS0A 2L0QA 4XROA 1AUMA 1K8AQ 2FQ1A 2QEXP 2VSQA 3G71P 5EW5E 2VLQA 3CC7P 2GZJA 3GZLA 1L0HA 1DV5A 2EHSA 1VQ9P 4H2WC 3OW2O 1YIJP 2K0YA 5DCKA 3VRLC 2LL8A 2AF8A 2GYKA 2Z46A 2FQ2A 1N8RQ 2CNRA 1M1KQ 1KQSO 2KOOA 2LOLA 2GZFA 1M74A 2L4BA 2ERHA 2Z45A 3NTEA 2EIAA 2QNWA 2PENA 2QA4P 5KP7B 3B4QA 2JGPA 3CMAP 5F2KA 3G6EP 2LIUA 4WYMA 5HGLA 2LKIA 2MVUA 2ROQA 2M5RA 1Q86Q 2LTEA 3CXCO 2K0XA 4QKOA 3RG2A 2OTLP 2N50A 2PEMA 2FAEA 2KGEA 1FR2A 4H2YC 3I55P 1DNYA 3GZMA 3EJEA 2KGAA 7CEIA 3CCMP 1NQ4A 5KP6B 1W2BO 2JO0A 2L22A 4R0MA 1VQ5P 3CCLP 2PEKA 2JU1A 5I4TG 4U0FA 1ACPA 4PH0A 2KG9A 4U0AA 4GR6A 2MR7A 3CC2P 3CCRP 4H2XC 4GR2A 3LMOA 1KD1Q 1A43A 4XFXA 2BUOA 3CC4P 3B5IA 1EOQA 2KOQA 4PWVB 1YI2P 1HY8A 2VLPA 1UJZA
chains in the Genus database with same CATH topology
3CE7A 1X3OA 2AF8A 2L9FA 4MRTC 2FQ2A 3NY7B 2KG6A 2EHTA 2FACA 2CNRA 2K93A 2LMLA 2KORA 2KOOA 2FVFA 2LOLA 5EJDA 2LIWA 5KP8B 2KGCA 2JQ4A 2JU2A 2L4BA 2KOSA 2GDWA 2PNGA 2QNWA 2AFDA 2FQ0A 5KP7B 2JGPA 4BPHA 4BPGA 2KG8A 2KOPA 2LIUA 1L0IA 2LKIA 2MVUA 2ROQA 2M5RA 2FHSC 3EJBA 3EJDA 2LTEA 2GDXA 5CZDB 2K0XA 2MY5A 2AVAA 2N6ZA 3RG2A 2N50A 2MVVA 4IZ6A 2XZ1C 2KWLA 2FAEA 2KGEA 4H2YC 1DNYA 2AFEA 2K92A 3GZMA 1T8KA 2KW2A 2KGDA 2N5IA 3EJEA 2FVEA 2KGAA 2DNWA 1KLPA 2CG5B 2CQ8A 1NQ4A 5KP6B 2LPKA 2L22A 4R0MA 2FADA 2N98A 4DG9A 2MF4A 5HVCA 2GDYA 2JU1A 1F80D 1AF8A 4PXHB 2K94A 4CA3A 1OR5A 1ACPA 2X2BA 2FVAA 4BPFA 2L0QA 2KG9A 2MR7A 4H2XC 2FQ1A 1VKUA 3LMOA 2MD9A 2VSQA 4HKGA 2N6YA 3GZLA 4NEOA 2MR8A 1L0HA 1DV5A 2EHSA 2XZ0D 2KOQA 4H2WC 2N5HA 2K0YA 2K2QA 4PWVB 1HY8A 5HV8A 2CGQA 2KR5A 1HQBA 2LL8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CE7 A;  1X3O A;  2AF8 A;  2L9F A;  4MRT C;  2FQ2 A;  3NY7 B;  2KG6 A;  2EHT A;  2FAC A;  2CNR A;  2K93 A;  2LML A;  2KOR A;  2KOO A;  2FVF A;  2LOL A;  5EJD A;  2LIW A;  5KP8 B;  2KGC A;  2JQ4 A;  2JU2 A;  2L4B A;  2KOS A;  2GDW A;  2PNG A;  2QNW A;  2AFD A;  2FQ0 A;  5KP7 B;  2JGP A;  4BPH A;  4BPG A;  2KG8 A;  2KOP A;  2LIU A;  1L0I A;  2LKI A;  2MVU A;  2ROQ A;  2M5R A;  2FHS C;  3EJB A;  3EJD A;  2LTE A;  2GDX A;  5CZD B;  2K0X A;  2MY5 A;  2AVA A;  2N6Z A;  3RG2 A;  2N50 A;  2MVV A;  4IZ6 A;  2XZ1 C;  2KWL A;  2FAE A;  2KGE A;  4H2Y C;  1DNY A;  2AFE A;  2K92 A;  3GZM A;  1T8K A;  2KW2 A;  2KGD A;  2N5I A;  3EJE A;  2FVE A;  2KGA A;  2DNW A;  1KLP A;  2CG5 B;  2CQ8 A;  1NQ4 A;  5KP6 B;  2LPK A;  2L22 A;  4R0M A;  2FAD A;  2N98 A;  4DG9 A;  2MF4 A;  5HVC A;  2GDY A;  2JU1 A;  1F80 D;  1AF8 A;  4PXH B;  2K94 A;  4CA3 A;  1OR5 A;  1ACP A;  2X2B A;  2FVA A;  4BPF A;  2L0Q A;  2KG9 A;  2MR7 A;  4H2X C;  2FQ1 A;  1VKU A;  3LMO A;  2MD9 A;  2VSQ A;  4HKG A;  2N6Y A;  3GZL A;  4NEO A;  2MR8 A;  1L0H A;  1DV5 A;  2EHS A;  2XZ0 D;  2KOQ A;  4H2W C;  2N5H A;  2K0Y A;  2K2Q A;  4PWV B;  1HY8 A;  5HV8 A;  2CGQ A;  2KR5 A;  1HQB A;  2LL8 A; 
#chains in the Genus database with same CATH topology
 1VHN A;  2L9F A;  3NY7 B;  2FAC A;  2K93 A;  2LML A;  3DS5 A;  4QNB A;  1VQL P;  2JQ4 A;  2JU2 A;  2GDW A;  4PH1 A;  2PNG A;  2FQ0 A;  3DS3 A;  2JYL A;  2K5X A;  4BPH A;  2JB0 A;  2JBG A;  1GXG A;  1VQP P;  3DS4 A;  3EJD A;  3U43 A;  3M1M A;  4IZ6 A;  2M8P A;  4XRQ A;  1BXI A;  4F37 A;  1M6E X;  4U0E A;  3G26 A;  1YJ9 P;  1RNI A;  1QRJ A;  2KW2 A;  3HYB A;  2GZI A;  1GXH A;  3RG6 C;  2CG5 B;  4XFY A;  1VQ8 P;  2N98 A;  4DG9 A;  1GPJ A;  1F80 D;  1VQO P;  4PXH B;  1ZNV A;  1E6J P;  1OR5 A;  2X2B A;  3DS2 A;  3GKL C;  3G21 A;  5HGO A;  3G4S P;  4BPF A;  1KC8 Q;  1VKU A;  3LRY A;  1BAJ A;  2GZG A;  4HKG A;  3CPW O;  1QVF O;  1K73 Q;  5HGN A;  1IMQ A;  2Z44 A;  2BHV A;  1RO2 A;  2JYG A;  4COC A;  3P05 A;  1RO0 A;  2K2Q A;  1M6N A;  5JPA A;  2CGQ A;  1UNK A;  2KR5 A;  1CEI A;  3CE7 A;  1E0H A;  1YJW P;  2XT1 A;  3H0D A;  1VQ7 P;  2M8L A;  1EMV A;  2KOR A;  2VLN A;  2L6E A;  2PY8 A;  3CME P;  1Z6M A;  1Q82 Q;  2KGC A;  3E2D A;  2KOS A;  1VQ4 P;  1VQM P;  2KOP A;  2OAR A;  2M8N A;  2FHS C;  5CZD B;  2PEQ A;  1A8O A;  4U0C A;  2N6Z A;  2KWL A;  1JJ2 O;  3G29 A;  4U0B A;  2K92 A;  2KGD A;  2N5I A;  2FVE A;  2PEO A;  1EIA A;  2DNW A;  1QVG O;  1K30 A;  1YHQ P;  2CQ8 A;  1M90 Q;  5BS1 A;  3GJN A;  3G28 A;  3G0V A;  2FAD A;  1MZ8 A;  2OTJ P;  4COP A;  5HVC A;  1AF8 A;  2K94 A;  4U0D A;  4CA3 A;  2FVA A;  2XV6 A;  3CCV P;  3DTJ A;  2MD9 A;  2N6Y A;  1Q81 Q;  3DPH A;  4NEO A;  2MR8 A;  5F2O A;  2P9X A;  2XZ0 D;  2N5H A;  2PEI A;  2DGY A;  3MGE A;  5HV8 A;  2XXM A;  1YIT P;  1HQB A;  1VQ6 P;  4IPY A;  2EG5 A;  1X3O A;  4MRT C;  3CCE P;  2KG6 A;  4M0I A;  2EHT A;  1ZMB A;  2PEJ A;  1IUQ A;  2FVF A;  3H47 A;  5EJD A;  2LIW A;  1D1D A;  5KP8 B;  2KOD A;  2AFD A;  1Q7Y Q;  2CWO A;  3Q20 A;  4XFZ A;  3H4E A;  1AYI A;  1IMP A;  1K9M Q;  2WPT A;  5HGM A;  2ONT A;  2VLO A;  1VQN P;  2E1M A;  4BPG A;  2KG8 A;  3CD6 P;  1L0I A;  3EJB A;  2GDX A;  3WBH A;  2MY5 A;  2AVA A;  2JAZ A;  2MVV A;  2XZ1 C;  1S72 P;  4UHP B;  1VQK P;  2AFE A;  2K0D X;  3DS1 A;  1YJN P;  1T8K A;  5F2N A;  3HZQ A;  2EFJ A;  1KLP A;  5BS2 A;  2LPK A;  2LF4 A;  2NO8 A;  3CCQ P;  2GZE A;  2MF4 A;  3CCJ P;  3G1I A;  2GDY A;  3CCU P;  3G1G A;  1NJI Q;  3CCS P;  3I56 P;  3DS0 A;  2L0Q A;  4XRO A;  1AUM A;  1K8A Q;  2FQ1 A;  2QEX P;  2VSQ A;  3G71 P;  5EW5 E;  2VLQ A;  3CC7 P;  2GZJ A;  3GZL A;  1L0H A;  1DV5 A;  2EHS A;  1VQ9 P;  4H2W C;  3OW2 O;  1YIJ P;  2K0Y A;  5DCK A;  3VRL C;  2LL8 A;  2AF8 A;  2GYK A;  2Z46 A;  2FQ2 A;  1N8R Q;  2CNR A;  1M1K Q;  1KQS O;  2KOO A;  2LOL A;  2GZF A;  1M74 A;  2L4B A;  2ERH A;  2Z45 A;  3NTE A;  2EIA A;  2QNW A;  2PEN A;  2QA4 P;  5KP7 B;  3B4Q A;  2JGP A;  3CMA P;  5F2K A;  3G6E P;  2LIU A;  4WYM A;  5HGL A;  2LKI A;  2MVU A;  2ROQ A;  2M5R A;  1Q86 Q;  2LTE A;  3CXC O;  2K0X A;  4QKO A;  3RG2 A;  2OTL P;  2N50 A;  2PEM A;  2FAE A;  2KGE A;  1FR2 A;  4H2Y C;  3I55 P;  1DNY A;  3GZM A;  3EJE A;  2KGA A;  7CEI A;  3CCM P;  1NQ4 A;  5KP6 B;  1W2B O;  2JO0 A;  2L22 A;  4R0M A;  1VQ5 P;  3CCL P;  2PEK A;  2JU1 A;  5I4T G;  4U0F A;  1ACP A;  4PH0 A;  2KG9 A;  4U0A A;  4GR6 A;  2MR7 A;  3CC2 P;  3CCR P;  4H2X C;  4GR2 A;  3LMO A;  1KD1 Q;  1A43 A;  4XFX A;  2BUO A;  3CC4 P;  3B5I A;  1EOQ A;  2KOQ A;  4PWV B;  1YI2 P;  1HY8 A;  2VLP A;  1UJZ A; 
#chains in the Genus database with same CATH homology
 3CE7 A;  1X3O A;  2AF8 A;  2L9F A;  4MRT C;  2FQ2 A;  3NY7 B;  2KG6 A;  2EHT A;  2FAC A;  2CNR A;  2K93 A;  2LML A;  2KOR A;  2KOO A;  2FVF A;  2LOL A;  5EJD A;  2LIW A;  5KP8 B;  2KGC A;  2JQ4 A;  2JU2 A;  2L4B A;  2KOS A;  2GDW A;  2PNG A;  2QNW A;  2AFD A;  2FQ0 A;  5KP7 B;  2JGP A;  4BPH A;  4BPG A;  2KG8 A;  2KOP A;  2LIU A;  1L0I A;  2LKI A;  2MVU A;  2ROQ A;  2M5R A;  2FHS C;  3EJB A;  3EJD A;  2LTE A;  2GDX A;  5CZD B;  2K0X A;  2MY5 A;  2AVA A;  2N6Z A;  3RG2 A;  2N50 A;  2MVV A;  4IZ6 A;  2XZ1 C;  2KWL A;  2FAE A;  2KGE A;  4H2Y C;  1DNY A;  2AFE A;  2K92 A;  3GZM A;  1T8K A;  2KW2 A;  2KGD A;  2N5I A;  3EJE A;  2FVE A;  2KGA A;  2DNW A;  1KLP A;  2CG5 B;  2CQ8 A;  1NQ4 A;  5KP6 B;  2LPK A;  2L22 A;  4R0M A;  2FAD A;  2N98 A;  4DG9 A;  2MF4 A;  5HVC A;  2GDY A;  2JU1 A;  1F80 D;  1AF8 A;  4PXH B;  2K94 A;  4CA3 A;  1OR5 A;  1ACP A;  2X2B A;  2FVA A;  4BPF A;  2L0Q A;  2KG9 A;  2MR7 A;  4H2X C;  2FQ1 A;  1VKU A;  3LMO A;  2MD9 A;  2VSQ A;  4HKG A;  2N6Y A;  3GZL A;  4NEO A;  2MR8 A;  1L0H A;  1DV5 A;  2EHS A;  2XZ0 D;  2KOQ A;  4H2W C;  2N5H A;  2K0Y A;  2K2Q A;  4PWV B;  1HY8 A;  5HV8 A;  2CGQ A;  2KR5 A;  1HQB A;  2LL8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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