2MW2A

Hha-h-ns46 charge zipper complex
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
67
structure length
67
Chain Sequence
LTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Dna binding protein
molecule keywords Hemolysin expression-modulating protein Hha
publication title A Three-protein Charge Zipper Stabilizes a Complex Modulating Bacterial Gene Silencing.
pubmed doi rcsb
source organism Escherichia coli k-12
total genus 20
structure length 67
sequence length 67
ec nomenclature
pdb deposition date 2014-10-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF05321 HHA Haemolysin expression modulating protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.40 Mainly Alpha Up-down Bundle Monooxygenase HHA 2mw2A00
4ICGC 2K5SA 1JW2A 2MW2A 2JQTA
chains in the Genus database with same CATH superfamily
3UO2A 3CFPA 2JH8A 3SI6A 4DU3A 1FYZE 3L1NA 1XL3C 4DTJA 3SJJA 2B1EA 1XMHE 4DU4A 2B7MA 2JHPA 3SUNA 3N1EA 3SPYA 3J27A 1FZ3E 1XVDE 3N1BA 3SQ4A 3SUPA 4DTOA 3S9HA 4DTUA 4I9QA 1FZ0E 3C95A 4EP9A 4X5MA 3C6PB 3SVIA 4B08A 1IG9A 3KD5E 4FJXA 4GAMC 4FJLA 4KHWA 4QNDA 2PFVA 4M42A 4FJ9A 2LF3A 4FJMA 1WAFA 2VIXA 1MHZG 3LDSA 4M3ZA 5IBKB 3NGIA 3BVOA 4KHNA 3HL8A 4KHUA 3OGLB 3QEVA 3OGMB 1FXXA 4KHSA 1FZHE 4RG8A 1XMFE 3RMDA 4FJ5A 3CQ8A 4FK4A 3V7DB 4FJHA 5IZ7A 2DTUA 1XMGE 1XVGE 3CFRA 4FJGA 1FPOA 3NE6A 3CFOA 4EYWA 4J2DA 2MZWB 4RNGA 1FZ2E 3QNNA 2P5OA 3SQ0A 4X5NA 1XU3E 4E4BA 2HD0A 4JRPA 2P1PB 2P1QB 3TAGA 4DTMA 4M3RA 4M45A 2VJ4A 3QEWA 1XU5E 3K2OA 2LF6A 4M41A 1XVBE 4JRQA 2OZMA 2MW2A 4I6JB 2DY4A 2FW3A 4FK2A 3SUOA 3HGLA 4M3XA 2E31A 1XVEE 5IREA 3QEIA 3SQ1A 4J2AA 4FK0A 1FZ8E 4IT5A 3LD8A 3WSOA 1JW2A 4ADOA 2PFTA 4FJNA 4AKGA 4I9LA 3SNNA 4HCCA 1FZ4E 4JS5A 4ADNA 4KHYA 3TAEA 3L2OB 4FVMA 2ATQA 1WAJA 2QXFA 4AI6A 3QERA 3QEPA 2JH9A 3QNOA 4E3SA 1MMOG 3LDBA 4M3WA 1FZ6E 2P5GA 2H4TA 4HCBA 1FZ1E 3TAFA 3L8BA 3TABA 3SCXA 1FZ7E 3RWUA 2P1NB 2JQTA 4M3UA 1Q9XA 4FJ8A 3SQ2A 1MTYG 1FZ9E 3E4YA 3E4WA 1XVCE 3KD1E 3LZJA 4AKIA 3UO3A 2OVQB 1FZ5E 4M3TA 2JPNA 2K5SA 1FS1A 2MMBA 4FJIA 3C6NB 4DTRA 1MHYG 4KI4A 4DTXA 3RMCA 4DTPA 2DEBA 3J2PA 1FZIE 3NCIA 1XVFE 2P1MB 4RL5A 2JHAA 3MKSB 2RCUA 4DTNA 4FJKA 3RMBA 4J2EA 2VJ5A 3C6OB 4EPHA 3TL8B 3NAEA 2JHCA 4DTSA 3NHGA 1Q9YA 2FYOA 4ICGC 4AKHA 2E32A 3HP9A 2YB5A 4J2BA 2OVRB 4M3YA 3LZIA 2OVPB 1NEXB 3C94A 3OGKB 3QESA 2OYQA 1P22A 4FJJA 1CLQA 1N1CA 3SPZA 3UIQA 2B8IA 3RMAA 4JS4A 3L0MA 2P1OB 2RKHA 3SUQA 4DU1A 2OZSA 3QETA 3QEXA 4KHQA 4QNCA 1IH7A 4KI6A 4FJ7A 5H37A 3NDKA 1LDKE 3HGKE 3TJYA
chains in the Genus database with same CATH topology
4ICGC 2K5SA 1JW2A 2MW2A 2JQTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ICG C;  2K5S A;  1JW2 A;  2MW2 A;  2JQT A; 
#chains in the Genus database with same CATH topology
 3UO2 A;  3CFP A;  2JH8 A;  3SI6 A;  4DU3 A;  1FYZ E;  3L1N A;  1XL3 C;  4DTJ A;  3SJJ A;  2B1E A;  1XMH E;  4DU4 A;  2B7M A;  2JHP A;  3SUN A;  3N1E A;  3SPY A;  3J27 A;  1FZ3 E;  1XVD E;  3N1B A;  3SQ4 A;  3SUP A;  4DTO A;  3S9H A;  4DTU A;  4I9Q A;  1FZ0 E;  3C95 A;  4EP9 A;  4X5M A;  3C6P B;  3SVI A;  4B08 A;  1IG9 A;  3KD5 E;  4FJX A;  4GAM C;  4FJL A;  4KHW A;  4QND A;  2PFV A;  4M42 A;  4FJ9 A;  2LF3 A;  4FJM A;  1WAF A;  2VIX A;  1MHZ G;  3LDS A;  4M3Z A;  5IBK B;  3NGI A;  3BVO A;  4KHN A;  3HL8 A;  4KHU A;  3OGL B;  3QEV A;  3OGM B;  1FXX A;  4KHS A;  1FZH E;  4RG8 A;  1XMF E;  3RMD A;  4FJ5 A;  3CQ8 A;  4FK4 A;  3V7D B;  4FJH A;  5IZ7 A;  2DTU A;  1XMG E;  1XVG E;  3CFR A;  4FJG A;  1FPO A;  3NE6 A;  3CFO A;  4EYW A;  4J2D A;  2MZW B;  4RNG A;  1FZ2 E;  3QNN A;  2P5O A;  3SQ0 A;  4X5N A;  1XU3 E;  4E4B A;  2HD0 A;  4JRP A;  2P1P B;  2P1Q B;  3TAG A;  4DTM A;  4M3R A;  4M45 A;  2VJ4 A;  3QEW A;  1XU5 E;  3K2O A;  2LF6 A;  4M41 A;  1XVB E;  4JRQ A;  2OZM A;  2MW2 A;  4I6J B;  2DY4 A;  2FW3 A;  4FK2 A;  3SUO A;  3HGL A;  4M3X A;  2E31 A;  1XVE E;  5IRE A;  3QEI A;  3SQ1 A;  4J2A A;  4FK0 A;  1FZ8 E;  4IT5 A;  3LD8 A;  3WSO A;  1JW2 A;  4ADO A;  2PFT A;  4FJN A;  4AKG A;  4I9L A;  3SNN A;  4HCC A;  1FZ4 E;  4JS5 A;  4ADN A;  4KHY A;  3TAE A;  3L2O B;  4FVM A;  2ATQ A;  1WAJ A;  2QXF A;  4AI6 A;  3QER A;  3QEP A;  2JH9 A;  3QNO A;  4E3S A;  1MMO G;  3LDB A;  4M3W A;  1FZ6 E;  2P5G A;  2H4T A;  4HCB A;  1FZ1 E;  3TAF A;  3L8B A;  3TAB A;  3SCX A;  1FZ7 E;  3RWU A;  2P1N B;  2JQT A;  4M3U A;  1Q9X A;  4FJ8 A;  3SQ2 A;  1MTY G;  1FZ9 E;  3E4Y A;  3E4W A;  1XVC E;  3KD1 E;  3LZJ A;  4AKI A;  3UO3 A;  2OVQ B;  1FZ5 E;  4M3T A;  2JPN A;  2K5S A;  1FS1 A;  2MMB A;  4FJI A;  3C6N B;  4DTR A;  1MHY G;  4KI4 A;  4DTX A;  3RMC A;  4DTP A;  2DEB A;  3J2P A;  1FZI E;  3NCI A;  1XVF E;  2P1M B;  4RL5 A;  2JHA A;  3MKS B;  2RCU A;  4DTN A;  4FJK A;  3RMB A;  4J2E A;  2VJ5 A;  3C6O B;  4EPH A;  3TL8 B;  3NAE A;  2JHC A;  4DTS A;  3NHG A;  1Q9Y A;  2FYO A;  4ICG C;  4AKH A;  2E32 A;  3HP9 A;  2YB5 A;  4J2B A;  2OVR B;  4M3Y A;  3LZI A;  2OVP B;  1NEX B;  3C94 A;  3OGK B;  3QES A;  2OYQ A;  1P22 A;  4FJJ A;  1CLQ A;  1N1C A;  3SPZ A;  3UIQ A;  2B8I A;  3RMA A;  4JS4 A;  3L0M A;  2P1O B;  2RKH A;  3SUQ A;  4DU1 A;  2OZS A;  3QET A;  3QEX A;  4KHQ A;  4QNC A;  1IH7 A;  4KI6 A;  4FJ7 A;  5H37 A;  3NDK A;  1LDK E;  3HGK E;  3TJY A; 
#chains in the Genus database with same CATH homology
 4ICG C;  2K5S A;  1JW2 A;  2MW2 A;  2JQT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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