2N5IA

Pltl-pyrrolyl
Total Genus 26
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
90
structure length
90
Chain Sequence
MDGEEVKEKIRRYIMEDLIGPSAKEDELDDQTPLLEWGILNSMNIVKLMVYIRDEMGVSIPSTHITGKYFKDLNAISRTVEQLKAESALE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Peptidyl carrier protein PltL
publication title Structure and Substrate Sequestration in the Pyoluteorin Type II Peptidyl Carrier Protein PltL.
pubmed doi rcsb
source organism Pseudomonas protegens pf-5
total genus 26
structure length 90
sequence length 90
ec nomenclature
pdb deposition date 2015-07-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2n5iA00
2CNRA 2FQ1A 2FHSC 4NEOA 5HVCA 2GDWA 2MR7A 2XZ0D 1ACPA 2KGDA 2QNWA 3RG2A 2LIUA 2LKIA 4PXHB 4BPHA 2KOSA 2N5IA 2MVUA 5KP7B 1AF8A 2KG9A 1HY8A 2K2QA 2LOLA 2LTEA 4BPGA 2N98A 2PNGA 4H2YC 1L0HA 2GDYA 1NQ4A 2KW2A 2N5HA 1HQBA 3EJBA 2CG5B 2MF4A 2VSQA 2FADA 2FVFA 3NY7B 2N6YA 4CA3A 2JU1A 2KWLA 2K0YA 3GZLA 2L9FA 3EJEA 1OR5A 2K94A 2MD9A 2M5RA 2JU2A 2FQ0A 4BPFA 2N50A 1DNYA 2KGEA 2FVEA 1VKUA 3LMOA 2X2BA 1KLPA 4R0MA 2XZ1C 2MR8A 2ROQA 2KG8A 2LMLA 2MVVA 4MRTC 2L0QA 2JQ4A 2AVAA 2L4BA 2KGAA 2K93A 2AF8A 2MY5A 2DNWA 2FAEA 2K0XA 2KOPA 5HV8A 2KOOA 2AFDA 2EHSA 1X3OA 2CGQA 2LL8A 1L0IA 4PWVB 2FQ2A 2EHTA 5KP8B 3GZMA 5CZDB 2KGCA 2L22A 5EJDA 4H2XC 2FACA 2FVAA 3EJDA 4IZ6A 5KP6B 2KG6A 1F80D 4DG9A 2N6ZA 4H2WC 2KORA 2GDXA 2KR5A 2AFEA 2LIWA 2LPKA 4HKGA 2CQ8A 3CE7A 2JGPA 1T8KA 2KOQA 1DV5A 2K92A
chains in the Genus database with same CATH superfamily
2CNRA 2FHSC 4NEOA 1M6NA 3DS3A 2P9XA 2Z44A 1Q81Q 1A8OA 5HGMA 4BPHA 1VQKP 3NTEA 1E0HA 2VLQA 5KP7B 2KG9A 1YHQP 2XV6A 3CPWO 2N98A 1IMPA 3CCLP 2GDYA 2N5HA 1EOQA 3EJBA 1M1KQ 3I56P 1VQ8P 2OARA 2JU1A 1VQNP 1FR2A 3H0DA 2L9FA 3DS0A 1AUMA 4U0DA 1OR5A 1YI2P 2MD9A 2JU2A 2FQ0A 1N8RQ 1VQ6P 1Q82Q 1VKUA 2X2BA 2XZ1C 5I4TG 2MVVA 3G1IA 4MRTC 2L4BA 2GZEA 2MY5A 5BS2A 1YJWP 2KOPA 2KOOA 3DS4A 2CGQA 5KP8B 2M8PA 3GZMA 2XT1A 2M8NA 4UHPB 1M74A 1UNKA 1NJIQ 5F2KA 2QA4P 2FACA 2NO8A 1RO0A 1M90Q 4M0IA 4HKGA 2AFEA 2Z46A 2KOQA 1DV5A 4QNBA 2ONTA 3LRYA 3G71P 1YIJP 2GDWA 3CCEP 2JBGA 2LKIA 2N5IA 2MVUA 5HGLA 3G6EP 3B5IA 1HY8A 2JYLA 3CC7P 1YJ9P 3B4QA 2JYGA 2PEJA 2BUOA 1HQBA 2CG5B 2MF4A 2GZFA 2FVFA 2VLOA 2M8LA 4CA3A 4U0CA 3GZLA 3GJNA 1RO2A 1KC8Q 2JO0A 3DS2A 1S72P 4BPFA 1DNYA 4IPYA 2PENA 1JJ2O 1VQ9P 1M6EX 3I55P 2KG8A 2LMLA 1VQMP 2JQ4A 2GYKA 2K93A 3G26A 2PEOA 2KODA 1BXIA 1X3OA 5EW5E 4COPA 4GR6A 4H2XC 1W2BO 2VLNA 4PH0A 1F80D 2PEKA 4XRQA 2GZJA 4XROA 1EMVA 2EIAA 2LIWA 3CCQP 1IMQA 2CQ8A 2K0DX 2JGPA 1T8KA 1QVGO 2WPTA 5DCKA 2MR7A 2JAZA 2DGYA 2QNWA 2LIUA 2EG5A 1Z6MA 1KD1Q 1AF8A 1AYIA 3CXCO 3G0VA 1GXGA 2K2QA 4BPGA 1IUQA 2Z45A 1Q86Q 4H2YC 2OTLP 3CCVP 4WYMA 3CC4P 2E1MA 2KW2A 2VSQA 1A43A 2FADA 2OTJP 1E6JP 3VRLC 4F37A 2N6YA 1D1DA 5BS1A 3DPHA 1YJNP 1CEIA 4QKOA 2KWLA 2K0YA 3H47A 1VQ5P 1K30A 3EJEA 4U0FA 3HYBA 2M5RA 2N50A 5F2NA 1GXHA 2GZGA 1VQLP 4R0MA 4XFXA 2MR8A 2ROQA 1ZNVA 2PEIA 3DTJA 1VQ4P 3H4EA 3Q20A 2EFJA 1VQ7P 2AF8A 2VLPA 3G4SP 3DS1A 2FAEA 2K0XA 2BHVA 3CMAP 1ZMBA 2XXMA 2AFDA 3OW2O 2LL8A 1L0IA 4PWVB 2CWOA 2EHTA 2PEMA 1VQPP 3WBHA 5EJDA 2QEXP 1MZ8A 3G29A 3CCRP 2ERHA 5HGOA 3EJDA 3E2DA 2JB0A 2KG6A 2N6ZA 1YITP 2KORA 2GDXA 2KR5A 3HZQA 3CE7A 2PEQA 1VHNA 3G1GA 2FQ1A 1QVFO 4U0BA 5HVCA 7CEIA 3U43A 1EIAA 2XZ0D 3RG6C 3CCSP 1ACPA 2KGDA 4U0EA 3RG2A 4PXHB 2KOSA 2L6EA 2LF4A 3GKLC 3CCMP 4GR2A 2LOLA 1VQOP 2LTEA 3G21A 2PNGA 1L0HA 5HGNA 1NQ4A 3M1MA 3NY7B 1GPJA 2K5XA 2GZIA 4PH1A 1QRJA 4XFYA 1RNIA 3CCJP 3CCUP 2K94A 3G28A 3DS5A 2KGEA 2FVEA 4XFZA 4U0AA 3LMOA 1KLPA 2PY8A 3MGEA 1BAJA 1K73Q 3CC2P 1UJZA 2L0QA 4COCA 2AVAA 2KGAA 2DNWA 5JPAA 5HV8A 2EHSA 2FQ2A 5CZDB 3CMEP 2KGCA 2L22A 1K9MQ 3P05A 2FVAA 4IZ6A 5KP6B 1Q7YQ 4DG9A 1KQSO 4H2WC 5F2OA 2LPKA 3CD6P 1K8AQ 2K92A
chains in the Genus database with same CATH topology
2CNRA 2FQ1A 2FHSC 4NEOA 5HVCA 2GDWA 2MR7A 2XZ0D 1ACPA 2KGDA 2QNWA 3RG2A 2LIUA 2LKIA 4PXHB 4BPHA 2KOSA 2N5IA 2MVUA 5KP7B 1AF8A 2KG9A 1HY8A 2K2QA 2LOLA 2LTEA 4BPGA 2N98A 2PNGA 4H2YC 1L0HA 2GDYA 1NQ4A 2KW2A 2N5HA 1HQBA 3EJBA 2CG5B 2MF4A 2VSQA 2FADA 2FVFA 3NY7B 2N6YA 4CA3A 2JU1A 2KWLA 2K0YA 3GZLA 2L9FA 3EJEA 1OR5A 2K94A 2MD9A 2M5RA 2JU2A 2FQ0A 4BPFA 2N50A 1DNYA 2KGEA 2FVEA 1VKUA 3LMOA 2X2BA 1KLPA 4R0MA 2XZ1C 2MR8A 2ROQA 2KG8A 2LMLA 2MVVA 4MRTC 2L0QA 2JQ4A 2AVAA 2L4BA 2KGAA 2K93A 2AF8A 2MY5A 2DNWA 2FAEA 2K0XA 2KOPA 5HV8A 2KOOA 2AFDA 2EHSA 1X3OA 2CGQA 2LL8A 1L0IA 4PWVB 2FQ2A 2EHTA 5KP8B 3GZMA 5CZDB 2KGCA 2L22A 5EJDA 4H2XC 2FACA 2FVAA 3EJDA 4IZ6A 5KP6B 2KG6A 1F80D 4DG9A 2N6ZA 4H2WC 2KORA 2GDXA 2KR5A 2AFEA 2LIWA 2LPKA 4HKGA 2CQ8A 3CE7A 2JGPA 1T8KA 2KOQA 1DV5A 2K92A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2CNR A;  2FQ1 A;  2FHS C;  4NEO A;  5HVC A;  2GDW A;  2MR7 A;  2XZ0 D;  1ACP A;  2KGD A;  2QNW A;  3RG2 A;  2LIU A;  2LKI A;  4PXH B;  4BPH A;  2KOS A;  2N5I A;  2MVU A;  5KP7 B;  1AF8 A;  2KG9 A;  1HY8 A;  2K2Q A;  2LOL A;  2LTE A;  4BPG A;  2N98 A;  2PNG A;  4H2Y C;  1L0H A;  2GDY A;  1NQ4 A;  2KW2 A;  2N5H A;  1HQB A;  3EJB A;  2CG5 B;  2MF4 A;  2VSQ A;  2FAD A;  2FVF A;  3NY7 B;  2N6Y A;  4CA3 A;  2JU1 A;  2KWL A;  2K0Y A;  3GZL A;  2L9F A;  3EJE A;  1OR5 A;  2K94 A;  2MD9 A;  2M5R A;  2JU2 A;  2FQ0 A;  4BPF A;  2N50 A;  1DNY A;  2KGE A;  2FVE A;  1VKU A;  3LMO A;  2X2B A;  1KLP A;  4R0M A;  2XZ1 C;  2MR8 A;  2ROQ A;  2KG8 A;  2LML A;  2MVV A;  4MRT C;  2L0Q A;  2JQ4 A;  2AVA A;  2L4B A;  2KGA A;  2K93 A;  2AF8 A;  2MY5 A;  2DNW A;  2FAE A;  2K0X A;  2KOP A;  5HV8 A;  2KOO A;  2AFD A;  2EHS A;  1X3O A;  2CGQ A;  2LL8 A;  1L0I A;  4PWV B;  2FQ2 A;  2EHT A;  5KP8 B;  3GZM A;  5CZD B;  2KGC A;  2L22 A;  5EJD A;  4H2X C;  2FAC A;  2FVA A;  3EJD A;  4IZ6 A;  5KP6 B;  2KG6 A;  1F80 D;  4DG9 A;  2N6Z A;  4H2W C;  2KOR A;  2GDX A;  2KR5 A;  2AFE A;  2LIW A;  2LPK A;  4HKG A;  2CQ8 A;  3CE7 A;  2JGP A;  1T8K A;  2KOQ A;  1DV5 A;  2K92 A; 
#chains in the Genus database with same CATH topology
 2CNR A;  2FHS C;  4NEO A;  1M6N A;  3DS3 A;  2P9X A;  2Z44 A;  1Q81 Q;  1A8O A;  5HGM A;  4BPH A;  1VQK P;  3NTE A;  1E0H A;  2VLQ A;  5KP7 B;  2KG9 A;  1YHQ P;  2XV6 A;  3CPW O;  2N98 A;  1IMP A;  3CCL P;  2GDY A;  2N5H A;  1EOQ A;  3EJB A;  1M1K Q;  3I56 P;  1VQ8 P;  2OAR A;  2JU1 A;  1VQN P;  1FR2 A;  3H0D A;  2L9F A;  3DS0 A;  1AUM A;  4U0D A;  1OR5 A;  1YI2 P;  2MD9 A;  2JU2 A;  2FQ0 A;  1N8R Q;  1VQ6 P;  1Q82 Q;  1VKU A;  2X2B A;  2XZ1 C;  5I4T G;  2MVV A;  3G1I A;  4MRT C;  2L4B A;  2GZE A;  2MY5 A;  5BS2 A;  1YJW P;  2KOP A;  2KOO A;  3DS4 A;  2CGQ A;  5KP8 B;  2M8P A;  3GZM A;  2XT1 A;  2M8N A;  4UHP B;  1M74 A;  1UNK A;  1NJI Q;  5F2K A;  2QA4 P;  2FAC A;  2NO8 A;  1RO0 A;  1M90 Q;  4M0I A;  4HKG A;  2AFE A;  2Z46 A;  2KOQ A;  1DV5 A;  4QNB A;  2ONT A;  3LRY A;  3G71 P;  1YIJ P;  2GDW A;  3CCE P;  2JBG A;  2LKI A;  2N5I A;  2MVU A;  5HGL A;  3G6E P;  3B5I A;  1HY8 A;  2JYL A;  3CC7 P;  1YJ9 P;  3B4Q A;  2JYG A;  2PEJ A;  2BUO A;  1HQB A;  2CG5 B;  2MF4 A;  2GZF A;  2FVF A;  2VLO A;  2M8L A;  4CA3 A;  4U0C A;  3GZL A;  3GJN A;  1RO2 A;  1KC8 Q;  2JO0 A;  3DS2 A;  1S72 P;  4BPF A;  1DNY A;  4IPY A;  2PEN A;  1JJ2 O;  1VQ9 P;  1M6E X;  3I55 P;  2KG8 A;  2LML A;  1VQM P;  2JQ4 A;  2GYK A;  2K93 A;  3G26 A;  2PEO A;  2KOD A;  1BXI A;  1X3O A;  5EW5 E;  4COP A;  4GR6 A;  4H2X C;  1W2B O;  2VLN A;  4PH0 A;  1F80 D;  2PEK A;  4XRQ A;  2GZJ A;  4XRO A;  1EMV A;  2EIA A;  2LIW A;  3CCQ P;  1IMQ A;  2CQ8 A;  2K0D X;  2JGP A;  1T8K A;  1QVG O;  2WPT A;  5DCK A;  2MR7 A;  2JAZ A;  2DGY A;  2QNW A;  2LIU A;  2EG5 A;  1Z6M A;  1KD1 Q;  1AF8 A;  1AYI A;  3CXC O;  3G0V A;  1GXG A;  2K2Q A;  4BPG A;  1IUQ A;  2Z45 A;  1Q86 Q;  4H2Y C;  2OTL P;  3CCV P;  4WYM A;  3CC4 P;  2E1M A;  2KW2 A;  2VSQ A;  1A43 A;  2FAD A;  2OTJ P;  1E6J P;  3VRL C;  4F37 A;  2N6Y A;  1D1D A;  5BS1 A;  3DPH A;  1YJN P;  1CEI A;  4QKO A;  2KWL A;  2K0Y A;  3H47 A;  1VQ5 P;  1K30 A;  3EJE A;  4U0F A;  3HYB A;  2M5R A;  2N50 A;  5F2N A;  1GXH A;  2GZG A;  1VQL P;  4R0M A;  4XFX A;  2MR8 A;  2ROQ A;  1ZNV A;  2PEI A;  3DTJ A;  1VQ4 P;  3H4E A;  3Q20 A;  2EFJ A;  1VQ7 P;  2AF8 A;  2VLP A;  3G4S P;  3DS1 A;  2FAE A;  2K0X A;  2BHV A;  3CMA P;  1ZMB A;  2XXM A;  2AFD A;  3OW2 O;  2LL8 A;  1L0I A;  4PWV B;  2CWO A;  2EHT A;  2PEM A;  1VQP P;  3WBH A;  5EJD A;  2QEX P;  1MZ8 A;  3G29 A;  3CCR P;  2ERH A;  5HGO A;  3EJD A;  3E2D A;  2JB0 A;  2KG6 A;  2N6Z A;  1YIT P;  2KOR A;  2GDX A;  2KR5 A;  3HZQ A;  3CE7 A;  2PEQ A;  1VHN A;  3G1G A;  2FQ1 A;  1QVF O;  4U0B A;  5HVC A;  7CEI A;  3U43 A;  1EIA A;  2XZ0 D;  3RG6 C;  3CCS P;  1ACP A;  2KGD A;  4U0E A;  3RG2 A;  4PXH B;  2KOS A;  2L6E A;  2LF4 A;  3GKL C;  3CCM P;  4GR2 A;  2LOL A;  1VQO P;  2LTE A;  3G21 A;  2PNG A;  1L0H A;  5HGN A;  1NQ4 A;  3M1M A;  3NY7 B;  1GPJ A;  2K5X A;  2GZI A;  4PH1 A;  1QRJ A;  4XFY A;  1RNI A;  3CCJ P;  3CCU P;  2K94 A;  3G28 A;  3DS5 A;  2KGE A;  2FVE A;  4XFZ A;  4U0A A;  3LMO A;  1KLP A;  2PY8 A;  3MGE A;  1BAJ A;  1K73 Q;  3CC2 P;  1UJZ A;  2L0Q A;  4COC A;  2AVA A;  2KGA A;  2DNW A;  5JPA A;  5HV8 A;  2EHS A;  2FQ2 A;  5CZD B;  3CME P;  2KGC A;  2L22 A;  1K9M Q;  3P05 A;  2FVA A;  4IZ6 A;  5KP6 B;  1Q7Y Q;  4DG9 A;  1KQS O;  4H2W C;  5F2O A;  2LPK A;  3CD6 P;  1K8A Q;  2K92 A; 
#chains in the Genus database with same CATH homology
 2CNR A;  2FQ1 A;  2FHS C;  4NEO A;  5HVC A;  2GDW A;  2MR7 A;  2XZ0 D;  1ACP A;  2KGD A;  2QNW A;  3RG2 A;  2LIU A;  2LKI A;  4PXH B;  4BPH A;  2KOS A;  2N5I A;  2MVU A;  5KP7 B;  1AF8 A;  2KG9 A;  1HY8 A;  2K2Q A;  2LOL A;  2LTE A;  4BPG A;  2N98 A;  2PNG A;  4H2Y C;  1L0H A;  2GDY A;  1NQ4 A;  2KW2 A;  2N5H A;  1HQB A;  3EJB A;  2CG5 B;  2MF4 A;  2VSQ A;  2FAD A;  2FVF A;  3NY7 B;  2N6Y A;  4CA3 A;  2JU1 A;  2KWL A;  2K0Y A;  3GZL A;  2L9F A;  3EJE A;  1OR5 A;  2K94 A;  2MD9 A;  2M5R A;  2JU2 A;  2FQ0 A;  4BPF A;  2N50 A;  1DNY A;  2KGE A;  2FVE A;  1VKU A;  3LMO A;  2X2B A;  1KLP A;  4R0M A;  2XZ1 C;  2MR8 A;  2ROQ A;  2KG8 A;  2LML A;  2MVV A;  4MRT C;  2L0Q A;  2JQ4 A;  2AVA A;  2L4B A;  2KGA A;  2K93 A;  2AF8 A;  2MY5 A;  2DNW A;  2FAE A;  2K0X A;  2KOP A;  5HV8 A;  2KOO A;  2AFD A;  2EHS A;  1X3O A;  2CGQ A;  2LL8 A;  1L0I A;  4PWV B;  2FQ2 A;  2EHT A;  5KP8 B;  3GZM A;  5CZD B;  2KGC A;  2L22 A;  5EJD A;  4H2X C;  2FAC A;  2FVA A;  3EJD A;  4IZ6 A;  5KP6 B;  2KG6 A;  1F80 D;  4DG9 A;  2N6Z A;  4H2W C;  2KOR A;  2GDX A;  2KR5 A;  2AFE A;  2LIW A;  2LPK A;  4HKG A;  2CQ8 A;  3CE7 A;  2JGP A;  1T8K A;  2KOQ A;  1DV5 A;  2K92 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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