2N98A

Solution structure of acyl carrier protein lipd from actinoplanes friuliensis
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
90
structure length
90
Chain Sequence
GHMSDLSTAPTLDSLRVWLVDCVAGHLGLDAATIATDLPLTSYGLDSVYALSIAAELEDHLDVSLDPTLIWDHPTIDALSTALVAELRSA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Acyl carrier protein
publication title Structural and dynamic characterization of a freestanding acyl carrier protein involved in the biosynthesis of cyclic lipopeptide antibiotics.
pubmed doi rcsb
source organism Actinoplanes friuliensis
total genus 22
structure length 90
sequence length 90
ec nomenclature
pdb deposition date 2015-11-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2n98A00
5HV8A 2FHSC 5EJDA 2GDXA 2MVUA 4H2XC 5HVCA 2KW2A 5KP7B 3EJDA 4BPGA 2LKIA 2K0XA 2KGAA 1AF8A 2LIWA 2MY5A 2FVEA 2DNWA 2VSQA 4R0MA 1ACPA 2KOQA 1F80D 1NQ4A 2JU1A 2GDWA 2FQ1A 2XZ0D 4H2WC 2PNGA 2KWLA 2AF8A 2LTEA 1X3OA 2N5IA 2CGQA 2FVAA 4H2YC 2FAEA 2N98A 2K94A 5KP8B 2KOPA 4NEOA 2KGCA 2K2QA 2M5RA 2JQ4A 2KOSA 3NY7B 2K92A 2KG6A 1DNYA 3EJEA 2JGPA 2AVAA 2N6ZA 2L9FA 2CNRA 2K93A 2KOOA 2MF4A 1HQBA 2GDYA 2CG5B 2CQ8A 2MD9A 2KORA 2KGDA 2XZ1C 2N6YA 2MR7A 2N5HA 4IZ6A 2MVVA 3RG2A 1KLPA 2LMLA 2LPKA 2KR5A 1T8KA 2AFDA 3CE7A 2K0YA 3GZMA 1OR5A 2FACA 1VKUA 3LMOA 1L0IA 2L4BA 2FVFA 2X2BA 2KG8A 2FADA 2L0QA 4PXHB 5CZDB 2QNWA 2MR8A 4MRTC 4BPFA 2EHTA 3EJBA 2FQ0A 1HY8A 4DG9A 4HKGA 2L22A 5KP6B 2AFEA 2N50A 2JU2A 2LOLA 2FQ2A 2LIUA 4CA3A 1DV5A 1L0HA 4PWVB 2EHSA 2KG9A 2LL8A 3GZLA 4BPHA 2KGEA 2ROQA
chains in the Genus database with same CATH superfamily
5HV8A 3VRLC 3CCVP 5EJDA 3CCRP 2GDXA 3LRYA 1YJ9P 4XFYA 4BPGA 2DGYA 2NO8A 3DS4A 3CC2P 3CCMP 1Q81Q 5HGOA 3HYBA 1F80D 3DS2A 1YJNP 1E0HA 2Z44A 1VQMP 3G4SP 1RO2A 2PNGA 1X3OA 2FVAA 2FAEA 2N98A 1AYIA 1IMPA 1VQ7P 1MZ8A 3NY7B 2GZFA 2VLPA 1DNYA 5F2NA 2N6ZA 1VQOP 2CNRA 2MF4A 1HQBA 1QVFO 2EG5A 7CEIA 1GXGA 2CQ8A 2N6YA 2MR7A 2N5HA 3GJNA 2KR5A 1EIAA 3G71P 2K0YA 2FACA 2L4BA 2KG8A 1KQSO 2GYKA 4U0FA 2VLQA 1AUMA 2K5XA 4DG9A 1Q82Q 2WPTA 1VQ5P 1ZMBA 2LOLA 2LIUA 1DV5A 1M1KQ 5I4TG 3GKLC 1IMQA 2K0DX 1M74A 1RO0A 4H2XC 5KP7B 3I56P 1QVGO 1Q86Q 2GZEA 2VSQA 2OTLP 5BS1A 2JO0A 1NQ4A 1YITP 1YI2P 2XZ0D 3H47A 1FR2A 3CMEP 2KWLA 2AF8A 4PH0A 2LTEA 4QKOA 1Z6MA 4H2YC 2KOPA 4NEOA 2VLOA 4IPYA 2K92A 2Z45A 1A43A 1YHQP 2K93A 2XT1A 4COPA 5HGLA 2MD9A 2KGDA 1M6EX 3OW2O 2PEJA 2PY8A 1KD1Q 3DS5A 2JB0A 3RG2A 3CCEP 2LMLA 3DTJA 4U0CA 4XRQA 2AFDA 3CE7A 3G0VA 1VHNA 1OR5A 4M0IA 5F2OA 1K9MQ 1NJIQ 1VKUA 4PH1A 2FADA 1KC8Q 2GZJA 5DCKA 2L6EA 1A8OA 2EHTA 1UNKA 1K30A 3U43A 2N50A 2ERHA 1L0HA 2M8PA 4PWVB 3CCUP 1VQNP 4U0EA 4BPHA 3CC7P 3DS1A 2BUOA 2VLNA 3CD6P 3E2DA 2MVUA 5HVCA 3EJDA 3CCJP 1AF8A 2LKIA 2K0XA 2LIWA 2MY5A 4WYMA 2BHVA 4UHPB 2DNWA 2KODA 1K73Q 1ACPA 2KOQA 1M6NA 2JU1A 2PEQA 2GDWA 2FQ1A 1YJWP 2OARA 3CMAP 1K8AQ 2N5IA 2CGQA 2K94A 4XROA 2KGCA 3G28A 2KOSA 2KG6A 2XXMA 2GZIA 3EJEA 1VQ9P 2AVAA 2KOOA 1VQ4P 3G26A 2GDYA 2CG5B 1VQKP 4U0BA 3CXCO 3MGEA 3DS0A 4IZ6A 2P9XA 2OTJP 1T8KA 2Z46A 3GZMA 2PENA 2LF4A 3Q20A 3LMOA 2PEOA 2PEMA 2X2BA 4PXHB 5CZDB 3H4EA 4GR6A 1W2BO 5F2KA 2MR8A 4MRTC 3CCSP 3G6EP 3EJBA 2FQ0A 4F37A 4QNBA 1BXIA 4XFXA 1IUQA 2L22A 4U0AA 1VQLP 1EOQA 2JU2A 4XFZA 3G1IA 4CA3A 3WBHA 4COCA 2JBGA 3M1MA 2KG9A 3RG6C 2KGEA 1L0IA 3CC4P 3P05A 1CEIA 2CWOA 2FHSC 2KW2A 3DPHA 2KGAA 3G29A 1ZNVA 2FVEA 2M8NA 1VQPP 2QA4P 4R0MA 2EIAA 1QRJA 1Q7YQ 3CPWO 4H2WC 2JYLA 2QEXP 2EFJA 3CCLP 3HZQA 2JYGA 5KP8B 1VQ6P 2K2QA 2M5RA 5BS2A 1D1DA 2JQ4A 1UJZA 3B5IA 2JGPA 2L9FA 3G21A 2JAZA 5EW5E 2M8LA 4U0DA 3I55P 2KORA 2XZ1C 1RNIA 2MVVA 3G1GA 1GPJA 1KLPA 3H0DA 1BAJA 2LPKA 1EMVA 2PEKA 2XV6A 2FVFA 2L0QA 1E6JP 1S72P 4GR2A 2QNWA 1M90Q 4BPFA 1N8RQ 1YIJP 5JPAA 3CCQP 1JJ2O 1HY8A 2ONTA 5HGNA 4HKGA 3B4QA 2GZGA 5KP6B 3DS3A 2AFEA 2PEIA 1VQ8P 2FQ2A 3NTEA 2E1MA 2EHSA 5HGMA 2LL8A 3GZLA 2ROQA 1GXHA
chains in the Genus database with same CATH topology
5HV8A 2FHSC 5EJDA 2GDXA 2MVUA 4H2XC 5HVCA 2KW2A 5KP7B 3EJDA 4BPGA 2LKIA 2K0XA 2KGAA 1AF8A 2LIWA 2MY5A 2FVEA 2DNWA 2VSQA 4R0MA 1ACPA 2KOQA 1F80D 1NQ4A 2JU1A 2GDWA 2FQ1A 2XZ0D 4H2WC 2PNGA 2KWLA 2AF8A 2LTEA 1X3OA 2N5IA 2CGQA 2FVAA 4H2YC 2FAEA 2N98A 2K94A 5KP8B 2KOPA 4NEOA 2KGCA 2K2QA 2M5RA 2JQ4A 2KOSA 3NY7B 2K92A 2KG6A 1DNYA 3EJEA 2JGPA 2AVAA 2N6ZA 2L9FA 2CNRA 2K93A 2KOOA 2MF4A 1HQBA 2GDYA 2CG5B 2CQ8A 2MD9A 2KORA 2KGDA 2XZ1C 2N6YA 2MR7A 2N5HA 4IZ6A 2MVVA 3RG2A 1KLPA 2LMLA 2LPKA 2KR5A 1T8KA 2AFDA 3CE7A 2K0YA 3GZMA 1OR5A 2FACA 1VKUA 3LMOA 1L0IA 2L4BA 2FVFA 2X2BA 2KG8A 2FADA 2L0QA 4PXHB 5CZDB 2QNWA 2MR8A 4MRTC 4BPFA 2EHTA 3EJBA 2FQ0A 1HY8A 4DG9A 4HKGA 2L22A 5KP6B 2AFEA 2N50A 2JU2A 2LOLA 2FQ2A 2LIUA 4CA3A 1DV5A 1L0HA 4PWVB 2EHSA 2KG9A 2LL8A 3GZLA 4BPHA 2KGEA 2ROQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5HV8 A;  2FHS C;  5EJD A;  2GDX A;  2MVU A;  4H2X C;  5HVC A;  2KW2 A;  5KP7 B;  3EJD A;  4BPG A;  2LKI A;  2K0X A;  2KGA A;  1AF8 A;  2LIW A;  2MY5 A;  2FVE A;  2DNW A;  2VSQ A;  4R0M A;  1ACP A;  2KOQ A;  1F80 D;  1NQ4 A;  2JU1 A;  2GDW A;  2FQ1 A;  2XZ0 D;  4H2W C;  2PNG A;  2KWL A;  2AF8 A;  2LTE A;  1X3O A;  2N5I A;  2CGQ A;  2FVA A;  4H2Y C;  2FAE A;  2N98 A;  2K94 A;  5KP8 B;  2KOP A;  4NEO A;  2KGC A;  2K2Q A;  2M5R A;  2JQ4 A;  2KOS A;  3NY7 B;  2K92 A;  2KG6 A;  1DNY A;  3EJE A;  2JGP A;  2AVA A;  2N6Z A;  2L9F A;  2CNR A;  2K93 A;  2KOO A;  2MF4 A;  1HQB A;  2GDY A;  2CG5 B;  2CQ8 A;  2MD9 A;  2KOR A;  2KGD A;  2XZ1 C;  2N6Y A;  2MR7 A;  2N5H A;  4IZ6 A;  2MVV A;  3RG2 A;  1KLP A;  2LML A;  2LPK A;  2KR5 A;  1T8K A;  2AFD A;  3CE7 A;  2K0Y A;  3GZM A;  1OR5 A;  2FAC A;  1VKU A;  3LMO A;  1L0I A;  2L4B A;  2FVF A;  2X2B A;  2KG8 A;  2FAD A;  2L0Q A;  4PXH B;  5CZD B;  2QNW A;  2MR8 A;  4MRT C;  4BPF A;  2EHT A;  3EJB A;  2FQ0 A;  1HY8 A;  4DG9 A;  4HKG A;  2L22 A;  5KP6 B;  2AFE A;  2N50 A;  2JU2 A;  2LOL A;  2FQ2 A;  2LIU A;  4CA3 A;  1DV5 A;  1L0H A;  4PWV B;  2EHS A;  2KG9 A;  2LL8 A;  3GZL A;  4BPH A;  2KGE A;  2ROQ A; 
#chains in the Genus database with same CATH topology
 5HV8 A;  3VRL C;  3CCV P;  5EJD A;  3CCR P;  2GDX A;  3LRY A;  1YJ9 P;  4XFY A;  4BPG A;  2DGY A;  2NO8 A;  3DS4 A;  3CC2 P;  3CCM P;  1Q81 Q;  5HGO A;  3HYB A;  1F80 D;  3DS2 A;  1YJN P;  1E0H A;  2Z44 A;  1VQM P;  3G4S P;  1RO2 A;  2PNG A;  1X3O A;  2FVA A;  2FAE A;  2N98 A;  1AYI A;  1IMP A;  1VQ7 P;  1MZ8 A;  3NY7 B;  2GZF A;  2VLP A;  1DNY A;  5F2N A;  2N6Z A;  1VQO P;  2CNR A;  2MF4 A;  1HQB A;  1QVF O;  2EG5 A;  7CEI A;  1GXG A;  2CQ8 A;  2N6Y A;  2MR7 A;  2N5H A;  3GJN A;  2KR5 A;  1EIA A;  3G71 P;  2K0Y A;  2FAC A;  2L4B A;  2KG8 A;  1KQS O;  2GYK A;  4U0F A;  2VLQ A;  1AUM A;  2K5X A;  4DG9 A;  1Q82 Q;  2WPT A;  1VQ5 P;  1ZMB A;  2LOL A;  2LIU A;  1DV5 A;  1M1K Q;  5I4T G;  3GKL C;  1IMQ A;  2K0D X;  1M74 A;  1RO0 A;  4H2X C;  5KP7 B;  3I56 P;  1QVG O;  1Q86 Q;  2GZE A;  2VSQ A;  2OTL P;  5BS1 A;  2JO0 A;  1NQ4 A;  1YIT P;  1YI2 P;  2XZ0 D;  3H47 A;  1FR2 A;  3CME P;  2KWL A;  2AF8 A;  4PH0 A;  2LTE A;  4QKO A;  1Z6M A;  4H2Y C;  2KOP A;  4NEO A;  2VLO A;  4IPY A;  2K92 A;  2Z45 A;  1A43 A;  1YHQ P;  2K93 A;  2XT1 A;  4COP A;  5HGL A;  2MD9 A;  2KGD A;  1M6E X;  3OW2 O;  2PEJ A;  2PY8 A;  1KD1 Q;  3DS5 A;  2JB0 A;  3RG2 A;  3CCE P;  2LML A;  3DTJ A;  4U0C A;  4XRQ A;  2AFD A;  3CE7 A;  3G0V A;  1VHN A;  1OR5 A;  4M0I A;  5F2O A;  1K9M Q;  1NJI Q;  1VKU A;  4PH1 A;  2FAD A;  1KC8 Q;  2GZJ A;  5DCK A;  2L6E A;  1A8O A;  2EHT A;  1UNK A;  1K30 A;  3U43 A;  2N50 A;  2ERH A;  1L0H A;  2M8P A;  4PWV B;  3CCU P;  1VQN P;  4U0E A;  4BPH A;  3CC7 P;  3DS1 A;  2BUO A;  2VLN A;  3CD6 P;  3E2D A;  2MVU A;  5HVC A;  3EJD A;  3CCJ P;  1AF8 A;  2LKI A;  2K0X A;  2LIW A;  2MY5 A;  4WYM A;  2BHV A;  4UHP B;  2DNW A;  2KOD A;  1K73 Q;  1ACP A;  2KOQ A;  1M6N A;  2JU1 A;  2PEQ A;  2GDW A;  2FQ1 A;  1YJW P;  2OAR A;  3CMA P;  1K8A Q;  2N5I A;  2CGQ A;  2K94 A;  4XRO A;  2KGC A;  3G28 A;  2KOS A;  2KG6 A;  2XXM A;  2GZI A;  3EJE A;  1VQ9 P;  2AVA A;  2KOO A;  1VQ4 P;  3G26 A;  2GDY A;  2CG5 B;  1VQK P;  4U0B A;  3CXC O;  3MGE A;  3DS0 A;  4IZ6 A;  2P9X A;  2OTJ P;  1T8K A;  2Z46 A;  3GZM A;  2PEN A;  2LF4 A;  3Q20 A;  3LMO A;  2PEO A;  2PEM A;  2X2B A;  4PXH B;  5CZD B;  3H4E A;  4GR6 A;  1W2B O;  5F2K A;  2MR8 A;  4MRT C;  3CCS P;  3G6E P;  3EJB A;  2FQ0 A;  4F37 A;  4QNB A;  1BXI A;  4XFX A;  1IUQ A;  2L22 A;  4U0A A;  1VQL P;  1EOQ A;  2JU2 A;  4XFZ A;  3G1I A;  4CA3 A;  3WBH A;  4COC A;  2JBG A;  3M1M A;  2KG9 A;  3RG6 C;  2KGE A;  1L0I A;  3CC4 P;  3P05 A;  1CEI A;  2CWO A;  2FHS C;  2KW2 A;  3DPH A;  2KGA A;  3G29 A;  1ZNV A;  2FVE A;  2M8N A;  1VQP P;  2QA4 P;  4R0M A;  2EIA A;  1QRJ A;  1Q7Y Q;  3CPW O;  4H2W C;  2JYL A;  2QEX P;  2EFJ A;  3CCL P;  3HZQ A;  2JYG A;  5KP8 B;  1VQ6 P;  2K2Q A;  2M5R A;  5BS2 A;  1D1D A;  2JQ4 A;  1UJZ A;  3B5I A;  2JGP A;  2L9F A;  3G21 A;  2JAZ A;  5EW5 E;  2M8L A;  4U0D A;  3I55 P;  2KOR A;  2XZ1 C;  1RNI A;  2MVV A;  3G1G A;  1GPJ A;  1KLP A;  3H0D A;  1BAJ A;  2LPK A;  1EMV A;  2PEK A;  2XV6 A;  2FVF A;  2L0Q A;  1E6J P;  1S72 P;  4GR2 A;  2QNW A;  1M90 Q;  4BPF A;  1N8R Q;  1YIJ P;  5JPA A;  3CCQ P;  1JJ2 O;  1HY8 A;  2ONT A;  5HGN A;  4HKG A;  3B4Q A;  2GZG A;  5KP6 B;  3DS3 A;  2AFE A;  2PEI A;  1VQ8 P;  2FQ2 A;  3NTE A;  2E1M A;  2EHS A;  5HGM A;  2LL8 A;  3GZL A;  2ROQ A;  1GXH A; 
#chains in the Genus database with same CATH homology
 5HV8 A;  2FHS C;  5EJD A;  2GDX A;  2MVU A;  4H2X C;  5HVC A;  2KW2 A;  5KP7 B;  3EJD A;  4BPG A;  2LKI A;  2K0X A;  2KGA A;  1AF8 A;  2LIW A;  2MY5 A;  2FVE A;  2DNW A;  2VSQ A;  4R0M A;  1ACP A;  2KOQ A;  1F80 D;  1NQ4 A;  2JU1 A;  2GDW A;  2FQ1 A;  2XZ0 D;  4H2W C;  2PNG A;  2KWL A;  2AF8 A;  2LTE A;  1X3O A;  2N5I A;  2CGQ A;  2FVA A;  4H2Y C;  2FAE A;  2N98 A;  2K94 A;  5KP8 B;  2KOP A;  4NEO A;  2KGC A;  2K2Q A;  2M5R A;  2JQ4 A;  2KOS A;  3NY7 B;  2K92 A;  2KG6 A;  1DNY A;  3EJE A;  2JGP A;  2AVA A;  2N6Z A;  2L9F A;  2CNR A;  2K93 A;  2KOO A;  2MF4 A;  1HQB A;  2GDY A;  2CG5 B;  2CQ8 A;  2MD9 A;  2KOR A;  2KGD A;  2XZ1 C;  2N6Y A;  2MR7 A;  2N5H A;  4IZ6 A;  2MVV A;  3RG2 A;  1KLP A;  2LML A;  2LPK A;  2KR5 A;  1T8K A;  2AFD A;  3CE7 A;  2K0Y A;  3GZM A;  1OR5 A;  2FAC A;  1VKU A;  3LMO A;  1L0I A;  2L4B A;  2FVF A;  2X2B A;  2KG8 A;  2FAD A;  2L0Q A;  4PXH B;  5CZD B;  2QNW A;  2MR8 A;  4MRT C;  4BPF A;  2EHT A;  3EJB A;  2FQ0 A;  1HY8 A;  4DG9 A;  4HKG A;  2L22 A;  5KP6 B;  2AFE A;  2N50 A;  2JU2 A;  2LOL A;  2FQ2 A;  2LIU A;  4CA3 A;  1DV5 A;  1L0H A;  4PWV B;  2EHS A;  2KG9 A;  2LL8 A;  3GZL A;  4BPH A;  2KGE A;  2ROQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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