2O3BA

Crystal structure complex of nuclease a (nuca) with intra-cellular inhibitor nuia
Total Genus 73
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
73
sequence length
241
structure length
241
Chain Sequence
GSISVHLLLGNPSGATPTKLTPDNYLMVKNQYALSYNNSKGTANWVAWQLNSSWLGNAERQDNFRPDKTLPAGWVRVTPSMYSGSGYARGHIAPSADRTKTTEDNAATFLMTNMMPQTPDNNRNTWGNLEDYCRELVSQGKELYIVAGPNGSLGKPLKGKVTVPKSTWKIVVVLDSPGSGLEGITANTRVIAVNIPNDPELNNDWRAYKVSVDELESLTGYDFLSNVSPNIQTSIESKVDN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Nuclease
publication title The nuclease a-inhibitor complex is characterized by a novel metal ion bridge.
pubmed doi rcsb
source organism Nostoc sp.
total genus 73
structure length 241
sequence length 241
ec nomenclature ec 3.1.30.-:
pdb deposition date 2006-12-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01223 Endonuclease_NS DNA/RNA non-specific endonuclease
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.570.10 Alpha Beta 3-Layer(aba) Sandwich Extracellular Endonuclease; Chain A Extracellular Endonuclease, subunit A 2o3bA00
3NKNA 4ZGAA 3NKRA 4ZG6A 4A1NA 1G8TA 1QAEA 5GKPA 5HRTA 5L0BA 1SMNA 2XH3A 2XGRA 4QN0A 1ZM8A 5INHA 4QGOA 2XRGA 3NKOA 3NKQA 4QH0A 5L0KA 4GTXA 4GTYA 4B56A 5DLVA 3OWVA 3ISMA 3WAVA 5DLWA 5L0EA 3NKMA 3NKPA 4E3YA 3S5BA 5IJQA 5IJSA 5DLTA 3WAWA 2XR9A 5LQQA 1QL0A 5LIAA 5KXAA 2O3BA 4ZG7A 4GTWA 3WAYA 3WAXA 5GKCA 4GTZA 4ZG9A
chains in the Genus database with same CATH superfamily
3NKNA 4ZGAA 3NKRA 4ZG6A 4A1NA 1G8TA 1QAEA 5GKPA 5HRTA 5L0BA 1SMNA 2XH3A 2XGRA 4QN0A 1ZM8A 5INHA 4QGOA 2XRGA 3NKOA 3NKQA 4QH0A 5L0KA 4GTXA 4GTYA 4B56A 5DLVA 3OWVA 3ISMA 3WAVA 5DLWA 5L0EA 3NKMA 3NKPA 4E3YA 3S5BA 5IJQA 5IJSA 5DLTA 3WAWA 2XR9A 5LQQA 1QL0A 5LIAA 5KXAA 2O3BA 4ZG7A 4GTWA 3WAYA 3WAXA 5GKCA 4GTZA 4ZG9A
chains in the Genus database with same CATH topology
3NKNA 4ZGAA 3NKRA 4ZG6A 4A1NA 1G8TA 1QAEA 5GKPA 5HRTA 5L0BA 1SMNA 2XH3A 2XGRA 4QN0A 1ZM8A 5INHA 4QGOA 2XRGA 3NKOA 3NKQA 4QH0A 5L0KA 4GTXA 4GTYA 4B56A 5DLVA 3OWVA 3ISMA 3WAVA 5DLWA 5L0EA 3NKMA 3NKPA 4E3YA 3S5BA 5IJQA 5IJSA 5DLTA 3WAWA 2XR9A 5LQQA 1QL0A 5LIAA 5KXAA 2O3BA 4ZG7A 4GTWA 3WAYA 3WAXA 5GKCA 4GTZA 4ZG9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3NKN A;  4ZGA A;  3NKR A;  4ZG6 A;  4A1N A;  1G8T A;  1QAE A;  5GKP A;  5HRT A;  5L0B A;  1SMN A;  2XH3 A;  2XGR A;  4QN0 A;  1ZM8 A;  5INH A;  4QGO A;  2XRG A;  3NKO A;  3NKQ A;  4QH0 A;  5L0K A;  4GTX A;  4GTY A;  4B56 A;  5DLV A;  3OWV A;  3ISM A;  3WAV A;  5DLW A;  5L0E A;  3NKM A;  3NKP A;  4E3Y A;  3S5B A;  5IJQ A;  5IJS A;  5DLT A;  3WAW A;  2XR9 A;  5LQQ A;  1QL0 A;  5LIA A;  5KXA A;  2O3B A;  4ZG7 A;  4GTW A;  3WAY A;  3WAX A;  5GKC A;  4GTZ A;  4ZG9 A; 
#chains in the Genus database with same CATH topology
 3NKN A;  4ZGA A;  3NKR A;  4ZG6 A;  4A1N A;  1G8T A;  1QAE A;  5GKP A;  5HRT A;  5L0B A;  1SMN A;  2XH3 A;  2XGR A;  4QN0 A;  1ZM8 A;  5INH A;  4QGO A;  2XRG A;  3NKO A;  3NKQ A;  4QH0 A;  5L0K A;  4GTX A;  4GTY A;  4B56 A;  5DLV A;  3OWV A;  3ISM A;  3WAV A;  5DLW A;  5L0E A;  3NKM A;  3NKP A;  4E3Y A;  3S5B A;  5IJQ A;  5IJS A;  5DLT A;  3WAW A;  2XR9 A;  5LQQ A;  1QL0 A;  5LIA A;  5KXA A;  2O3B A;  4ZG7 A;  4GTW A;  3WAY A;  3WAX A;  5GKC A;  4GTZ A;  4ZG9 A; 
#chains in the Genus database with same CATH homology
 3NKN A;  4ZGA A;  3NKR A;  4ZG6 A;  4A1N A;  1G8T A;  1QAE A;  5GKP A;  5HRT A;  5L0B A;  1SMN A;  2XH3 A;  2XGR A;  4QN0 A;  1ZM8 A;  5INH A;  4QGO A;  2XRG A;  3NKO A;  3NKQ A;  4QH0 A;  5L0K A;  4GTX A;  4GTY A;  4B56 A;  5DLV A;  3OWV A;  3ISM A;  3WAV A;  5DLW A;  5L0E A;  3NKM A;  3NKP A;  4E3Y A;  3S5B A;  5IJQ A;  5IJS A;  5DLT A;  3WAW A;  2XR9 A;  5LQQ A;  1QL0 A;  5LIA A;  5KXA A;  2O3B A;  4ZG7 A;  4GTW A;  3WAY A;  3WAX A;  5GKC A;  4GTZ A;  4ZG9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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