2O5JD

Crystal structure of the t. thermophilus rnap polymerase elongation complex with the ntp substrate analog
Total Genus 275
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
275
sequence length
1504
structure length
1264
Chain Sequence
KKEVRKVRIALASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPIKDYECACGKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHIELATPAAHIWFVKDVPSKIGTLLDLSATELEQVLYFSKYIVLDPKGAILNGVPVEKRQLLTDEEYRELRYGKQETYPLPPGVDALVKDGEEVVKGQELAPGVVSRLDGVALYRFASILVVKARVYPFEDDVEVSTGDRVAPGDVLADGGKVKSDVYGRVEVDLVRNVVRVVESYDIDARMGAEAIQQLLKELDLEALEKELLEEMKHPSRARRAKARKRLEVVRAFLDSGNRPEWMILEAVPVLPPDLRPMVQVDGGRFATSDLNDLYRRLINRNNRLKKLLAQGAPEIIIRNEKRMLQEAVDALLDNGRRGAPVTNPGSDRPLRSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFLLKKMEEKGIAPNVKAARRMLERQRDIKDEVWDALEEVIHGKVVLLNRAPTLHRLGIQAFQPVLVEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARIQMLSAHNLLSPASGEPLAKPSRDIILGLYYITQVRKEKKGAGLEFATPEEALAAHERGEVALNAPIKVAGRETSVGRLKYVFANPDEALLAVAHGIVDLQDVVTVRYMGKRLETSPGRILFARIVAEAVEDEKVAWELIQLDVPQEKNSLKDLVYQAFLRLGMEKTARLLDALKYYGFTFSTTSGITIGIDDAVIPEEKKQYLEEADRKLLQIEQAYEMGFLTDRERYDQILQLWTETTEKVTQAVFKNFEENYPFNPLYVMAQSGARGNPQQIRQLCGLRGLMQKPSGETFEVPVRSSFREGLTVLEYFISSHGARKGGADTALRTADSGYLTRKLVDVTHEIVVREADCGTTNYISVPLFQPDEVTRSLRLRKRADIEAGLYGRVLAREVEVLGVRLEEGRYLSMDDVHLLIKAAEAGEIQEVPVRSPLTCQTRYGVCQKCYGYDLSMARPVSIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGAADITQGLPRVIELFEARRPKAKAIDPHQLLEAKGPEAVERYLVEEIQKVYRAQGVKLHDKHIEIVVRQMMKYVEVTDPGDSRLLEGQVLEKWDVEALNERLIAEGKTPVAWKPLLMGVTKSALSTKSWLSAASFQNTTHVLTEAAIAGKKDELIGLKENVILGRLIPAGTGSDFVRFTQVVDQKTLKAIEEARKEAVEA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase/dna-rna hybrid
molecule keywords 5'-D(P*CP*CP*CP*TP*GP*TP*CP*TP*GP*GP*CP*GP*TP*TP*CP*GP*CP*GP
publication title Structural basis for substrate loading in bacterial RNA polymerase.
pubmed doi rcsb
total genus 275
structure length 1264
sequence length 1504
chains with identical sequence N
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2006-12-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
D PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2
D PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3
D PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1
D PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5
D PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.132.30 Mainly Alpha Orthogonal Bundle Topoisomerase I; Chain A, domain 4 Topoisomerase I; Chain A, domain 4 2o5jD05
1.10.274.100 Mainly Alpha Orthogonal Bundle Enzyme I; Chain A, domain 2 Enzyme I; Chain A, domain 2 2o5jD04
2.20.28.170 Mainly Beta Single Sheet Rubrerythrin, domain 2 Rubrerythrin, domain 2 2o5jD07
2.40.40.70 Mainly Beta Beta Barrel Barwin-like endoglucanases Barwin-like endoglucanases 2o5jD03
3GTLA 2JA5A 1I3QA 2WB1A 1K83A 1I50A 3GTJA 2O5JD 1TWHA 3CQZA 4C2MA 2E2HA 1YNND 3GTKA 4AYBA 3GTGA 1HQMD 1TWAA 3GTOA 2R93A 2BE5D 2NVYA 3FKIA 2R92A 1TWCA 2VUMA 1I6VD 2PMZA 2NVXA 2E2IA 3GTMA 2A68D 3GTPA 2JA7A 1Y1WA 1WCMA 2YU9A 4QIWA 2R7ZA 3GTQA 1YNJD 2B63A 2A69D 3HKZA 3H0GA 1R9TA 2JA6A 1ZYRD 2WAQA 1SFOA 2Y0SA 1TWGA 1SMYD 1IW7D 2A6ED 2CW0D 1Y1VA 1TWFA 2A6HD
chains in the Genus database with same CATH superfamily
3GTLA 4KAWX 4AR5A 1K83A 4JS7A 1QDNA 1SEUA 1RB9A 3GTKL 1HQMD 1F4LA 3IR7A 4A3JL 2HWGA 4FG2A 3WWNB 1WCMA 3B0AB 1L8FA 4BXXL 3H0GL 5K2ME 2JIOA 3CZBA 5H1Sc 2EZCA 2PJJA 1PYUB 2C6BA 3VPBE 1CZ5A 1I50A 3S1RL 2E7ZA 2J9UB 4QIWP 4YWLA 4C2MA 4LHNA 3U44A 1ODHA 4A3DL 2DSXA 3FKIL 2HR5A 2MX8A 1R7RA 4KDLA 3RZOL 2XJRA 1K4TA 2A68D 2E2IL 2JA7L 2PSMC 2V3VA 4ZN1B 1Y1WL 1PYQA 2NYDA 1NXGA 4QIWA 4AI0A 4A3BL 2C45A 2WB1P 3GTQL 1BFYA 5C4XL 1R9TA 4L48A 3KYLA 2VPZA 3IU3I 1TWGL 5EIOC 2XJSA 3P8BA 4D3ZA 4L8IA 1Q16A 2IV2X 1RYQA 2WB1A 3KYVA 4POFA 5FTNA 2ERJA 2LPIA 2C6AA 3LWRB 1A35A 2BE5D 2R92A 1TWAL 3ML1A 7RXNA 2DMRA 3QQ7A 4CEHA 1DD5A 3GTML 1Y5IA 1SIWA 4AR6A 4BBSL 5FTMA 2R7ZL 3HOYL 3MAQA 3HU2A 3DU5A 4V2QA 1YUZA 1FDOA 1WQGA 1RRJA 2CR8A 1IS1A 3X2NA 1SFOL 2V0EA 3S2DL 5MLC3 4QCLA 2NAPA 5B6CA 1NXEA 1I3QA 4JJOA 3GTLL 3P2AA 3HOWL 1QYBA 4AVRA 5IZ2A 3QQCE 2LPJA 1K83L 3EZAA 2KI8A 4XXBB 4C5SA 3LRDA 5FTKA 5FTJA 4POGA 2Y0SP 2G6GA 3GTPA 4GFQA 4JAFA 2JA8L 3LWPB 1YLEA 4IP9A 1WCML 1HD5A 4C2M1 1N10A 2V3BB 2VPWA 4Y52L 1DVBA 1SMMA 3EZBA 1GE9A 5JSNB 2XJTA 2Y0SA 3K5MA 1SMYD 1KQGA 3MQKB 4D7ZB 4JADA 1OGYA 1Y1VA 1R0GA 4E6YA 2ZIXA 3LR2A 5IP7L 2O5JD 2JIQA 5M5WL 1V9MA 4EJ3A 5IY0A 3CQZA 5H4UA 4AONB 4B8CD 3GTOA 1S30A 1TWCA 3WVOA 3LWVB 2PNWA 3X2IA 1T8IA 3TM7B 1B71A 1KQFA 4NOKA 2PVEA 6RXNA 3LHPS 4A3FL 4DMRA 1R9TL 4JP7A 2GMGA 4A3KL 1EZAA 4KODA 2XJUA 2A6HD 4BABA 2V0FA 4CEJA 1ZYMA 3LWQB 2M6OA 1JYBA 1YNND 2AUSB 1S2ZA 3HKZP 3X2HA 1RYTA 4C5RA 5MGNA 1E61A 3PO3L 2R92L 2R4GA 5C3EL 1W27A 2GAEA 3S15L 4FBSA 3IR6A 4O26A 1PFWA 3RZ6A 1Y4ZA 2YU9A 1TL8A 2X0PA 1DX8A 2AE0X 3X2PA 3HKZA 4CRZA 3KYUA 4IP8A 3K5OA 1B13A 2CKCA 3LPEB 1IW7D 1TWFA 1I3QL 5JVG1 1VZHA 1DMRA 4CS0A 5T5ID 2PPTA 5GAHc 2RDVA 1UHEA 2EZAA 1EU1A 3RZDL 1NNQA 4LHLA 5GM9A 3PLXB 3HOVL 2QL0A 2VUMA 1YK5A 3GTPL 3PWFA 2B5ID 4TVMA 3K58A 4V2RA 1VZGA 2B63A 3DMRA 5FJ8L 2N3EA 2Y0NA 2LTHA 3PL5A 3I4NL 1TGOA 2XJPA 4JCWA 1CAAA 3K5NA 1LTLA 5C44L 1Z92B 1VZIA 2MS3A 4XGHA 4Q5VA 2PMZP 1Y1VL 5DM61 2EEOB 3D30A 1DMSA 4D3YA 3GTJA 4C5UA 1IROA 2H12A 3HJYB 3CQZL 4GS7D 4C3JL 4CEIA 3S16L 2R93L 1T9QA 3PIO1 1TWCL 1I6VD 2PMZA 1BRFA 2KKDA 2M4VA 5RXNA 2PYAA 4V196 4AHZA 2ERSA 4WFN1 3NFPI 1BQ8A 1LKOA 1PQEA 4RXNA 3MPSA 5AI3A 3HJWB 2CKAA 5MLC9 1YK4A 4H3TA 5JVH1 3ENGA 1QCSA 3QVDA 1R0HA 1R5ZA 1EH1A 3KYYA 4C3IL 3LF9A 4Q5GA 4AHYA 2E2HA 1WJVA 3GTGA 2NVYA 5JSBB 1PFYA 1T9OA 5GAEc 1FDIA 1I6HL 4KLNA 1BW3A 3A44A 4AR4A 5AN9H 2EY4E 2AYJA 3S1ML 1RDVA 5T5MD 1RDGA 4C3HL 3M4OL 1NH3A 3M3GA 2AQCA 5AI2A 2XJVA 3S17L 2APOB 1TMOA 2BH0A 4ZN3B 1E32A 1QCVA 4RV0A 5MF6A 1PT1A 4CRYG 1R0FA 2E2JL 4C6GA 1QQTA 2YUJA 2F5JA 3H3VM 1TWFL 1P7PA 1Q8IA 1S3SA 2JI1A 4BY1L 2ENGA 4KDDA 4G6BA 1I50L 1BE7A 1RR8C 1R0IA 5EINC 5C18A 4A3LL 1PFUA 4A3EL 3O5AA 2WAQP 2LKMB 4YWMA 2VUML 5CQGA 5IYBL 4AAYA 2E2IA 2PJHB 1ZC1A 3H9BA 4X6AL 1B2JA 3PIP1 1RWDA 2B63L 4A93L 3OUGA 1FHMA 1B2OA 4NOLA 2RFKB 4AI1A 2WAQA 1CZ4A 2LYIA 8RXNA 3SUMA 2KQAA 2M6PA 4AN8A 4JLRC 1EZBA 4JP6A 1C09A 1R0JA 2JA5A 3EZEA 3PKJA 5M5YL 1YUXA 5DYIA 2N1DB 1A36A 2AQLA 4LMOA 5IP9L 4AR3A 4NOHA 1VC3B 2PICA 1TWAA 1Y698 3HU1A 1LPQA 1PT0A 2NVXA 1IRNA 2X0OA 4CQ5A 2PI8A 3H97A 1R49A 1E18A 4BBRL 3HOZL 3X2JA 1E60A 1SFOA 2LCQA 4AI2A 3IAYA 5M3FL 3ZG6A 3K57A 1OWBA 2XJQA 2CW0D 1ISEA 5FTLA 3I4ML 4TPUA 1OWCA 1PPYA 4FYDA 2FIOA 2E2HL 1LKPA 4A3IL 3GTGL 2L0ZA 3LNLA 2NVYL 3S2HL 3S14L 3M4AA 2MP0A 4GA5A 3KYWA 2HROA 1E8JA 4KB2A 3J7Y1 2NVQL 3HOXL 5DYGA 2K3QA 1WC2A 3SJRA 2JA6A 1ZYRD 3SUJA 3K59A 1SMWA 1S24A 3DU6A 1BW4A 1AW8B 1E5VA 3QQ8A 4BAAA 1PZXA 3H9CA 4U671 1K4SA 1G8KA 2JIMA 3PO2L 3IR5A 2K3OA 2EZBA 1TWHA 5GAGc 4JAEA 2F4QA 1UHDA 4ZM7A 3GTOL 3K5LA 2VPXA 5EPPA 3HAXC 2MQAA 1YV1A 1IU5A 3FDJA 4GA6A 5M3ML 3HU3A 1WLFA 4FXDA 1FHHA 3MSUA 5MFZA 3HOUL 3S1QL 1R27A 1LKMA 3SULA 5C9HA 3X2GA 3RZTA 5GLXA 2MX9A 1PFVA 2JA5L 5M5XL 5FLML 5C1BA 3SS2A 1SMUA 3JR7A 5DM71 1H5NA 3K7AL 1OA7A 3TIWA 3GTKA 2JI2A 4KDIA 1H7VA 2K3NA 2NYAA 1T6PA 2NVXL 3H99A 1WQFA 3X2KA 1Y2MA 4KB4A 4OYDB 2YU9L 3LR8A 1T9PA 2VPYA 3H0GA 3S1NL 4FERA 2JI3A 2KN9A 5MFPA 2PVXA 1AA6A 4AYBP 1T6JA 3PZAA 2Z3RB 1ZRPA 2M4YA 4Y7NL 5GADc 2X0QA 3M3YL 4FGUA 1WQHA 2K2DA 1CADA 2V45A 4AHCA 4AI3A 1PQFA 3LR6A 5IYCL 4AHXA 5C4JL 1OA9A 4AYBA 3X2OA 2Z3QB 3FKIA 5IYDL 2HCZX 3X2LA 4ENGA 1SC7A 2JA7A 1Y1WA 4FFTA 3GTQA 1YNJD 3PKIA 2A69D 4ME3A 5GLFA 2JA6L 1H0HA 2NVTL 1PQHA 3X2MA 3B08B 2JIPA 1TWGA 2JIRA 3CF2A 4NOMA 2B9SB 4AOKB 3K35A 4KC6A 1VCXA 1EK8A 4A3CL 1TWHL 3GTJL 4KO8A 2R93A 4K9FA 3QC8A 4F3EA 1A31A 4JAGA 2YIIA 4AHWA 1CR5A 3NZ4A 3WWLA 3QWZA 5GLYA 3RYGA 4UY81 1G8JA 3U4QA 1IU6A 3P9AA 3GTMA 2FIPA 2VL6A 1BQ9A 2G5DA 2R7ZA 2VK9A 3LWOB 4BY7L 2HVYC 4FG4A 3SUKA 4A3ML 1MIUA 3KYXA 4AZDA 4A3GL 2A6ED 1EJ9A 3J7Z1
chains in the Genus database with same CATH topology
3GTLA 4KAWX 4AR5A 1K83A 1QDNA 1SEUA 1RB9A 1HQMD 3IR7A 3WWNB 1WCMA 3B0AB 5K2ME 2JIOA 3CZBA 5H1Sc 2PJJA 1PYUB 2C6BA 3VPBE 1CZ5A 1I50A 2E7ZA 2J9UB 4YWLA 4C2MA 4LHNA 3U44A 1ODHA 2DSXA 1R7RA 2HR5A 2MX8A 4KDLA 2XJRA 1K4TA 2A68D 2PSMC 2V3VA 4ZN1B 1PYQA 2NYDA 1NXGA 4QIWA 4AI0A 2C45A 1BFYA 1R9TA 3KYLA 2VPZA 3IU3I 5EIOC 2XJSA 3P8BA 4D3ZA 4L8IA 1Q16A 2IV2X 1RYQA 2WB1A 3KYVA 4POFA 5FTNA 2ERJA 2LPIA 2C6AA 1A35A 2BE5D 2R92A 3ML1A 7RXNA 2DMRA 3QQ7A 4CEHA 1DD5A 1Y5IA 1SIWA 4AR6A 5FTMA 3MAQA 3HU2A 3DU5A 1YUZA 1FDOA 1WQGA 1RRJA 2CR8A 1IS1A 2V0EA 5MLC3 4QCLA 2NAPA 5B6CA 1NXEA 1I3QA 3P2AA 1QYBA 5IZ2A 3QQCE 2LPJA 2KI8A 4XXBB 3LRDA 5FTKA 5FTJA 4POGA 2G6GA 3GTPA 4GFQA 4JAFA 1YLEA 4IP9A 2V3BB 2VPWA 1DVBA 1SMMA 1GE9A 5JSNB 2XJTA 2Y0SA 3K5MA 1SMYD 1KQGA 4D7ZB 4JADA 1OGYA 1Y1VA 1R0GA 4E6YA 2ZIXA 3LR2A 2O5JD 2JIQA 1V9MA 4EJ3A 5IY0A 3CQZA 4AONB 4B8CD 3GTOA 1S30A 1TWCA 3WVOA 2PNWA 1T8IA 3TM7B 1B71A 1KQFA 4NOKA 2PVEA 6RXNA 3LHPS 4DMRA 2GMGA 4KODA 2XJUA 2A6HD 2V0FA 4CEJA 2M6OA 1JYBA 1YNND 1S2ZA 1RYTA 5MGNA 1E61A 2R4GA 2GAEA 4FBSA 3IR6A 4O26A 3RZ6A 1Y4ZA 2YU9A 1TL8A 2X0PA 1DX8A 2AE0X 3HKZA 4CRZA 3KYUA 4IP8A 3K5OA 1B13A 2CKCA 3LPEB 1IW7D 1TWFA 5JVG1 1VZHA 1DMRA 4CS0A 5T5ID 2PPTA 5GAHc 2RDVA 1UHEA 1EU1A 1NNQA 4LHLA 3PLXB 2QL0A 2VUMA 1YK5A 3PWFA 2B5ID 4TVMA 3K58A 1VZGA 2B63A 3DMRA 2N3EA 2Y0NA 2LTHA 1TGOA 2XJPA 1CAAA 3K5NA 1LTLA 1Z92B 1VZIA 2MS3A 4XGHA 4Q5VA 5DM61 2EEOB 1DMSA 4D3YA 3GTJA 1IROA 2H12A 4GS7D 4CEIA 1T9QA 3PIO1 1I6VD 2PMZA 1BRFA 2KKDA 2M4VA 5RXNA 2PYAA 4V196 4AHZA 2ERSA 4WFN1 3NFPI 1BQ8A 1LKOA 1PQEA 4RXNA 3MPSA 5AI3A 2CKAA 5MLC9 1YK4A 4H3TA 5JVH1 1QCSA 3QVDA 1R0HA 1R5ZA 1EH1A 3KYYA 3LF9A 4Q5GA 4AHYA 2E2HA 1WJVA 3GTGA 2NVYA 5JSBB 1T9OA 5GAEc 1FDIA 4KLNA 3A44A 4AR4A 5AN9H 2AYJA 5T5MD 1RDVA 1RDGA 1NH3A 5AI2A 2XJVA 1TMOA 4ZN3B 1E32A 1QCVA 4RV0A 5MF6A 1PT1A 4CRYG 1R0FA 2YUJA 2F5JA 1Q8IA 1S3SA 2JI1A 4KDDA 4G6BA 1BE7A 1RR8C 1R0IA 5EINC 5C18A 3O5AA 2LKMB 4YWMA 5CQGA 4AAYA 2E2IA 2PJHB 1ZC1A 1B2JA 3PIP1 1RWDA 3OUGA 1FHMA 1B2OA 4NOLA 4AI1A 2WAQA 1CZ4A 2LYIA 8RXNA 2M6PA 4AN8A 4JLRC 1C09A 1R0JA 2JA5A 3PKJA 1YUXA 5DYIA 2N1DB 1A36A 2AQLA 4LMOA 4AR3A 4NOHA 1VC3B 2PICA 1TWAA 1Y698 3HU1A 1LPQA 1PT0A 2NVXA 1IRNA 2X0OA 2PI8A 1R49A 1E18A 1E60A 1SFOA 2LCQA 4AI2A 3IAYA 3ZG6A 3K57A 1OWBA 2XJQA 2CW0D 1ISEA 5FTLA 4TPUA 1OWCA 1PPYA 4FYDA 2FIOA 1LKPA 2L0ZA 3LNLA 3M4AA 4GA5A 3KYWA 1E8JA 4KB2A 3J7Y1 5DYGA 2K3QA 3SJRA 2JA6A 1ZYRD 3K59A 1SMWA 1S24A 3DU6A 1AW8B 1E5VA 3QQ8A 4U671 1K4SA 1G8KA 2JIMA 3IR5A 2K3OA 1TWHA 5GAGc 4JAEA 2F4QA 1UHDA 3K5LA 2VPXA 5EPPA 2MQAA 1YV1A 1IU5A 4GA6A 3HU3A 1WLFA 4FXDA 1FHHA 3MSUA 5MFZA 1R27A 1LKMA 5C9HA 3RZTA 2MX9A 5C1BA 3SS2A 1SMUA 5DM71 1H5NA 3TIWA 3GTKA 2JI2A 4KDIA 1H7VA 2K3NA 2NYAA 1WQFA 4KB4A 4OYDB 3LR8A 1T9PA 2VPYA 3H0GA 2JI3A 2KN9A 5MFPA 2PVXA 1AA6A 3PZAA 2Z3RB 1ZRPA 2M4YA 5GADc 2X0QA 4FGUA 1WQHA 2K2DA 1CADA 2V45A 4AHCA 4AI3A 1PQFA 3LR6A 4AHXA 4AYBA 2Z3QB 3FKIA 1SC7A 2JA7A 1Y1WA 3GTQA 1YNJD 3PKIA 2A69D 4ME3A 5GLFA 1H0HA 1PQHA 3B08B 2JIPA 1TWGA 2JIRA 3CF2A 4NOMA 2B9SB 4AOKB 3K35A 4KC6A 1VCXA 1EK8A 4KO8A 2R93A 4K9FA 3QC8A 4F3EA 1A31A 4JAGA 4AHWA 1CR5A 3QWZA 3WWLA 3RYGA 4UY81 1G8JA 3U4QA 1IU6A 3P9AA 3GTMA 2FIPA 2VL6A 1BQ9A 2G5DA 2R7ZA 2VK9A 1MIUA 3KYXA 4AZDA 2A6ED 1EJ9A 3J7Z1
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GTL A;  2JA5 A;  1I3Q A;  2WB1 A;  1K83 A;  1I50 A;  3GTJ A;  2O5J D;  1TWH A;  3CQZ A;  4C2M A;  2E2H A;  1YNN D;  3GTK A;  4AYB A;  3GTG A;  1HQM D;  1TWA A;  3GTO A;  2R93 A;  2BE5 D;  2NVY A;  3FKI A;  2R92 A;  1TWC A;  2VUM A;  1I6V D;  2PMZ A;  2NVX A;  2E2I A;  3GTM A;  2A68 D;  3GTP A;  2JA7 A;  1Y1W A;  1WCM A;  2YU9 A;  4QIW A;  2R7Z A;  3GTQ A;  1YNJ D;  2B63 A;  2A69 D;  3HKZ A;  3H0G A;  1R9T A;  2JA6 A;  1ZYR D;  2WAQ A;  1SFO A;  2Y0S A;  1TWG A;  1SMY D;  1IW7 D;  2A6E D;  2CW0 D;  1Y1V A;  1TWF A;  2A6H D; 
#chains in the Genus database with same CATH topology
 3GTL A;  4KAW X;  4AR5 A;  1K83 A;  4JS7 A;  1QDN A;  1SEU A;  1RB9 A;  3GTK L;  1HQM D;  1F4L A;  3IR7 A;  4A3J L;  2HWG A;  4FG2 A;  3WWN B;  1WCM A;  3B0A B;  1L8F A;  4BXX L;  3H0G L;  5K2M E;  2JIO A;  3CZB A;  5H1S c;  2EZC A;  2PJJ A;  1PYU B;  2C6B A;  3VPB E;  1CZ5 A;  1I50 A;  3S1R L;  2E7Z A;  2J9U B;  4QIW P;  4YWL A;  4C2M A;  4LHN A;  3U44 A;  1ODH A;  4A3D L;  2DSX A;  3FKI L;  2HR5 A;  2MX8 A;  1R7R A;  4KDL A;  3RZO L;  2XJR A;  1K4T A;  2A68 D;  2E2I L;  2JA7 L;  2PSM C;  2V3V A;  4ZN1 B;  1Y1W L;  1PYQ A;  2NYD A;  1NXG A;  4QIW A;  4AI0 A;  4A3B L;  2C45 A;  2WB1 P;  3GTQ L;  1BFY A;  5C4X L;  1R9T A;  4L48 A;  3KYL A;  2VPZ A;  3IU3 I;  1TWG L;  5EIO C;  2XJS A;  3P8B A;  4D3Z A;  4L8I A;  1Q16 A;  2IV2 X;  1RYQ A;  2WB1 A;  3KYV A;  4POF A;  5FTN A;  2ERJ A;  2LPI A;  2C6A A;  3LWR B;  1A35 A;  2BE5 D;  2R92 A;  1TWA L;  3ML1 A;  7RXN A;  2DMR A;  3QQ7 A;  4CEH A;  1DD5 A;  3GTM L;  1Y5I A;  1SIW A;  4AR6 A;  4BBS L;  5FTM A;  2R7Z L;  3HOY L;  3MAQ A;  3HU2 A;  3DU5 A;  4V2Q A;  1YUZ A;  1FDO A;  1WQG A;  1RRJ A;  2CR8 A;  1IS1 A;  3X2N A;  1SFO L;  2V0E A;  3S2D L;  5MLC 3;  4QCL A;  2NAP A;  5B6C A;  1NXE A;  1I3Q A;  4JJO A;  3GTL L;  3P2A A;  3HOW L;  1QYB A;  4AVR A;  5IZ2 A;  3QQC E;  2LPJ A;  1K83 L;  3EZA A;  2KI8 A;  4XXB B;  4C5S A;  3LRD A;  5FTK A;  5FTJ A;  4POG A;  2Y0S P;  2G6G A;  3GTP A;  4GFQ A;  4JAF A;  2JA8 L;  3LWP B;  1YLE A;  4IP9 A;  1WCM L;  1HD5 A;  4C2M 1;  1N10 A;  2V3B B;  2VPW A;  4Y52 L;  1DVB A;  1SMM A;  3EZB A;  1GE9 A;  5JSN B;  2XJT A;  2Y0S A;  3K5M A;  1SMY D;  1KQG A;  3MQK B;  4D7Z B;  4JAD A;  1OGY A;  1Y1V A;  1R0G A;  4E6Y A;  2ZIX A;  3LR2 A;  5IP7 L;  2O5J D;  2JIQ A;  5M5W L;  1V9M A;  4EJ3 A;  5IY0 A;  3CQZ A;  5H4U A;  4AON B;  4B8C D;  3GTO A;  1S30 A;  1TWC A;  3WVO A;  3LWV B;  2PNW A;  3X2I A;  1T8I A;  3TM7 B;  1B71 A;  1KQF A;  4NOK A;  2PVE A;  6RXN A;  3LHP S;  4A3F L;  4DMR A;  1R9T L;  4JP7 A;  2GMG A;  4A3K L;  1EZA A;  4KOD A;  2XJU A;  2A6H D;  4BAB A;  2V0F A;  4CEJ A;  1ZYM A;  3LWQ B;  2M6O A;  1JYB A;  1YNN D;  2AUS B;  1S2Z A;  3HKZ P;  3X2H A;  1RYT A;  4C5R A;  5MGN A;  1E61 A;  3PO3 L;  2R92 L;  2R4G A;  5C3E L;  1W27 A;  2GAE A;  3S15 L;  4FBS A;  3IR6 A;  4O26 A;  1PFW A;  3RZ6 A;  1Y4Z A;  2YU9 A;  1TL8 A;  2X0P A;  1DX8 A;  2AE0 X;  3X2P A;  3HKZ A;  4CRZ A;  3KYU A;  4IP8 A;  3K5O A;  1B13 A;  2CKC A;  3LPE B;  1IW7 D;  1TWF A;  1I3Q L;  5JVG 1;  1VZH A;  1DMR A;  4CS0 A;  5T5I D;  2PPT A;  5GAH c;  2RDV A;  1UHE A;  2EZA A;  1EU1 A;  3RZD L;  1NNQ A;  4LHL A;  5GM9 A;  3PLX B;  3HOV L;  2QL0 A;  2VUM A;  1YK5 A;  3GTP L;  3PWF A;  2B5I D;  4TVM A;  3K58 A;  4V2R A;  1VZG A;  2B63 A;  3DMR A;  5FJ8 L;  2N3E A;  2Y0N A;  2LTH A;  3PL5 A;  3I4N L;  1TGO A;  2XJP A;  4JCW A;  1CAA A;  3K5N A;  1LTL A;  5C44 L;  1Z92 B;  1VZI A;  2MS3 A;  4XGH A;  4Q5V A;  2PMZ P;  1Y1V L;  5DM6 1;  2EEO B;  3D30 A;  1DMS A;  4D3Y A;  3GTJ A;  4C5U A;  1IRO A;  2H12 A;  3HJY B;  3CQZ L;  4GS7 D;  4C3J L;  4CEI A;  3S16 L;  2R93 L;  1T9Q A;  3PIO 1;  1TWC L;  1I6V D;  2PMZ A;  1BRF A;  2KKD A;  2M4V A;  5RXN A;  2PYA A;  4V19 6;  4AHZ A;  2ERS A;  4WFN 1;  3NFP I;  1BQ8 A;  1LKO A;  1PQE A;  4RXN A;  3MPS A;  5AI3 A;  3HJW B;  2CKA A;  5MLC 9;  1YK4 A;  4H3T A;  5JVH 1;  3ENG A;  1QCS A;  3QVD A;  1R0H A;  1R5Z A;  1EH1 A;  3KYY A;  4C3I L;  3LF9 A;  4Q5G A;  4AHY A;  2E2H A;  1WJV A;  3GTG A;  2NVY A;  5JSB B;  1PFY A;  1T9O A;  5GAE c;  1FDI A;  1I6H L;  4KLN A;  1BW3 A;  3A44 A;  4AR4 A;  5AN9 H;  2EY4 E;  2AYJ A;  3S1M L;  1RDV A;  5T5M D;  1RDG A;  4C3H L;  3M4O L;  1NH3 A;  3M3G A;  2AQC A;  5AI2 A;  2XJV A;  3S17 L;  2APO B;  1TMO A;  2BH0 A;  4ZN3 B;  1E32 A;  1QCV A;  4RV0 A;  5MF6 A;  1PT1 A;  4CRY G;  1R0F A;  2E2J L;  4C6G A;  1QQT A;  2YUJ A;  2F5J A;  3H3V M;  1TWF L;  1P7P A;  1Q8I A;  1S3S A;  2JI1 A;  4BY1 L;  2ENG A;  4KDD A;  4G6B A;  1I50 L;  1BE7 A;  1RR8 C;  1R0I A;  5EIN C;  5C18 A;  4A3L L;  1PFU A;  4A3E L;  3O5A A;  2WAQ P;  2LKM B;  4YWM A;  2VUM L;  5CQG A;  5IYB L;  4AAY A;  2E2I A;  2PJH B;  1ZC1 A;  3H9B A;  4X6A L;  1B2J A;  3PIP 1;  1RWD A;  2B63 L;  4A93 L;  3OUG A;  1FHM A;  1B2O A;  4NOL A;  2RFK B;  4AI1 A;  2WAQ A;  1CZ4 A;  2LYI A;  8RXN A;  3SUM A;  2KQA A;  2M6P A;  4AN8 A;  4JLR C;  1EZB A;  4JP6 A;  1C09 A;  1R0J A;  2JA5 A;  3EZE A;  3PKJ A;  5M5Y L;  1YUX A;  5DYI A;  2N1D B;  1A36 A;  2AQL A;  4LMO A;  5IP9 L;  4AR3 A;  4NOH A;  1VC3 B;  2PIC A;  1TWA A;  1Y69 8;  3HU1 A;  1LPQ A;  1PT0 A;  2NVX A;  1IRN A;  2X0O A;  4CQ5 A;  2PI8 A;  3H97 A;  1R49 A;  1E18 A;  4BBR L;  3HOZ L;  3X2J A;  1E60 A;  1SFO A;  2LCQ A;  4AI2 A;  3IAY A;  5M3F L;  3ZG6 A;  3K57 A;  1OWB A;  2XJQ A;  2CW0 D;  1ISE A;  5FTL A;  3I4M L;  4TPU A;  1OWC A;  1PPY A;  4FYD A;  2FIO A;  2E2H L;  1LKP A;  4A3I L;  3GTG L;  2L0Z A;  3LNL A;  2NVY L;  3S2H L;  3S14 L;  3M4A A;  2MP0 A;  4GA5 A;  3KYW A;  2HRO A;  1E8J A;  4KB2 A;  3J7Y 1;  2NVQ L;  3HOX L;  5DYG A;  2K3Q A;  1WC2 A;  3SJR A;  2JA6 A;  1ZYR D;  3SUJ A;  3K59 A;  1SMW A;  1S24 A;  3DU6 A;  1BW4 A;  1AW8 B;  1E5V A;  3QQ8 A;  4BAA A;  1PZX A;  3H9C A;  4U67 1;  1K4S A;  1G8K A;  2JIM A;  3PO2 L;  3IR5 A;  2K3O A;  2EZB A;  1TWH A;  5GAG c;  4JAE A;  2F4Q A;  1UHD A;  4ZM7 A;  3GTO L;  3K5L A;  2VPX A;  5EPP A;  3HAX C;  2MQA A;  1YV1 A;  1IU5 A;  3FDJ A;  4GA6 A;  5M3M L;  3HU3 A;  1WLF A;  4FXD A;  1FHH A;  3MSU A;  5MFZ A;  3HOU L;  3S1Q L;  1R27 A;  1LKM A;  3SUL A;  5C9H A;  3X2G A;  3RZT A;  5GLX A;  2MX9 A;  1PFV A;  2JA5 L;  5M5X L;  5FLM L;  5C1B A;  3SS2 A;  1SMU A;  3JR7 A;  5DM7 1;  1H5N A;  3K7A L;  1OA7 A;  3TIW A;  3GTK A;  2JI2 A;  4KDI A;  1H7V A;  2K3N A;  2NYA A;  1T6P A;  2NVX L;  3H99 A;  1WQF A;  3X2K A;  1Y2M A;  4KB4 A;  4OYD B;  2YU9 L;  3LR8 A;  1T9P A;  2VPY A;  3H0G A;  3S1N L;  4FER A;  2JI3 A;  2KN9 A;  5MFP A;  2PVX A;  1AA6 A;  4AYB P;  1T6J A;  3PZA A;  2Z3R B;  1ZRP A;  2M4Y A;  4Y7N L;  5GAD c;  2X0Q A;  3M3Y L;  4FGU A;  1WQH A;  2K2D A;  1CAD A;  2V45 A;  4AHC A;  4AI3 A;  1PQF A;  3LR6 A;  5IYC L;  4AHX A;  5C4J L;  1OA9 A;  4AYB A;  3X2O A;  2Z3Q B;  3FKI A;  5IYD L;  2HCZ X;  3X2L A;  4ENG A;  1SC7 A;  2JA7 A;  1Y1W A;  4FFT A;  3GTQ A;  1YNJ D;  3PKI A;  2A69 D;  4ME3 A;  5GLF A;  2JA6 L;  1H0H A;  2NVT L;  1PQH A;  3X2M A;  3B08 B;  2JIP A;  1TWG A;  2JIR A;  3CF2 A;  4NOM A;  2B9S B;  4AOK B;  3K35 A;  4KC6 A;  1VCX A;  1EK8 A;  4A3C L;  1TWH L;  3GTJ L;  4KO8 A;  2R93 A;  4K9F A;  3QC8 A;  4F3E A;  1A31 A;  4JAG A;  2YII A;  4AHW A;  1CR5 A;  3NZ4 A;  3WWL A;  3QWZ A;  5GLY A;  3RYG A;  4UY8 1;  1G8J A;  3U4Q A;  1IU6 A;  3P9A A;  3GTM A;  2FIP A;  2VL6 A;  1BQ9 A;  2G5D A;  2R7Z A;  2VK9 A;  3LWO B;  4BY7 L;  2HVY C;  4FG4 A;  3SUK A;  4A3M L;  1MIU A;  3KYX A;  4AZD A;  4A3G L;  2A6E D;  1EJ9 A;  3J7Z 1; 
#chains in the Genus database with same CATH homology
 3GTL A;  4KAW X;  4AR5 A;  1K83 A;  1QDN A;  1SEU A;  1RB9 A;  1HQM D;  3IR7 A;  3WWN B;  1WCM A;  3B0A B;  5K2M E;  2JIO A;  3CZB A;  5H1S c;  2PJJ A;  1PYU B;  2C6B A;  3VPB E;  1CZ5 A;  1I50 A;  2E7Z A;  2J9U B;  4YWL A;  4C2M A;  4LHN A;  3U44 A;  1ODH A;  2DSX A;  1R7R A;  2HR5 A;  2MX8 A;  4KDL A;  2XJR A;  1K4T A;  2A68 D;  2PSM C;  2V3V A;  4ZN1 B;  1PYQ A;  2NYD A;  1NXG A;  4QIW A;  4AI0 A;  2C45 A;  1BFY A;  1R9T A;  3KYL A;  2VPZ A;  3IU3 I;  5EIO C;  2XJS A;  3P8B A;  4D3Z A;  4L8I A;  1Q16 A;  2IV2 X;  1RYQ A;  2WB1 A;  3KYV A;  4POF A;  5FTN A;  2ERJ A;  2LPI A;  2C6A A;  1A35 A;  2BE5 D;  2R92 A;  3ML1 A;  7RXN A;  2DMR A;  3QQ7 A;  4CEH A;  1DD5 A;  1Y5I A;  1SIW A;  4AR6 A;  5FTM A;  3MAQ A;  3HU2 A;  3DU5 A;  1YUZ A;  1FDO A;  1WQG A;  1RRJ A;  2CR8 A;  1IS1 A;  2V0E A;  5MLC 3;  4QCL A;  2NAP A;  5B6C A;  1NXE A;  1I3Q A;  3P2A A;  1QYB A;  5IZ2 A;  3QQC E;  2LPJ A;  2KI8 A;  4XXB B;  3LRD A;  5FTK A;  5FTJ A;  4POG A;  2G6G A;  3GTP A;  4GFQ A;  4JAF A;  1YLE A;  4IP9 A;  2V3B B;  2VPW A;  1DVB A;  1SMM A;  1GE9 A;  5JSN B;  2XJT A;  2Y0S A;  3K5M A;  1SMY D;  1KQG A;  4D7Z B;  4JAD A;  1OGY A;  1Y1V A;  1R0G A;  4E6Y A;  2ZIX A;  3LR2 A;  2O5J D;  2JIQ A;  1V9M A;  4EJ3 A;  5IY0 A;  3CQZ A;  4AON B;  4B8C D;  3GTO A;  1S30 A;  1TWC A;  3WVO A;  2PNW A;  1T8I A;  3TM7 B;  1B71 A;  1KQF A;  4NOK A;  2PVE A;  6RXN A;  3LHP S;  4DMR A;  2GMG A;  4KOD A;  2XJU A;  2A6H D;  2V0F A;  4CEJ A;  2M6O A;  1JYB A;  1YNN D;  1S2Z A;  1RYT A;  5MGN A;  1E61 A;  2R4G A;  2GAE A;  4FBS A;  3IR6 A;  4O26 A;  3RZ6 A;  1Y4Z A;  2YU9 A;  1TL8 A;  2X0P A;  1DX8 A;  2AE0 X;  3HKZ A;  4CRZ A;  3KYU A;  4IP8 A;  3K5O A;  1B13 A;  2CKC A;  3LPE B;  1IW7 D;  1TWF A;  5JVG 1;  1VZH A;  1DMR A;  4CS0 A;  5T5I D;  2PPT A;  5GAH c;  2RDV A;  1UHE A;  1EU1 A;  1NNQ A;  4LHL A;  3PLX B;  2QL0 A;  2VUM A;  1YK5 A;  3PWF A;  2B5I D;  4TVM A;  3K58 A;  1VZG A;  2B63 A;  3DMR A;  2N3E A;  2Y0N A;  2LTH A;  1TGO A;  2XJP A;  1CAA A;  3K5N A;  1LTL A;  1Z92 B;  1VZI A;  2MS3 A;  4XGH A;  4Q5V A;  5DM6 1;  2EEO B;  1DMS A;  4D3Y A;  3GTJ A;  1IRO A;  2H12 A;  4GS7 D;  4CEI A;  1T9Q A;  3PIO 1;  1I6V D;  2PMZ A;  1BRF A;  2KKD A;  2M4V A;  5RXN A;  2PYA A;  4V19 6;  4AHZ A;  2ERS A;  4WFN 1;  3NFP I;  1BQ8 A;  1LKO A;  1PQE A;  4RXN A;  3MPS A;  5AI3 A;  2CKA A;  5MLC 9;  1YK4 A;  4H3T A;  5JVH 1;  1QCS A;  3QVD A;  1R0H A;  1R5Z A;  1EH1 A;  3KYY A;  3LF9 A;  4Q5G A;  4AHY A;  2E2H A;  1WJV A;  3GTG A;  2NVY A;  5JSB B;  1T9O A;  5GAE c;  1FDI A;  4KLN A;  3A44 A;  4AR4 A;  5AN9 H;  2AYJ A;  5T5M D;  1RDV A;  1RDG A;  1NH3 A;  5AI2 A;  2XJV A;  1TMO A;  4ZN3 B;  1E32 A;  1QCV A;  4RV0 A;  5MF6 A;  1PT1 A;  4CRY G;  1R0F A;  2YUJ A;  2F5J A;  1Q8I A;  1S3S A;  2JI1 A;  4KDD A;  4G6B A;  1BE7 A;  1RR8 C;  1R0I A;  5EIN C;  5C18 A;  3O5A A;  2LKM B;  4YWM A;  5CQG A;  4AAY A;  2E2I A;  2PJH B;  1ZC1 A;  1B2J A;  3PIP 1;  1RWD A;  3OUG A;  1FHM A;  1B2O A;  4NOL A;  4AI1 A;  2WAQ A;  1CZ4 A;  2LYI A;  8RXN A;  2M6P A;  4AN8 A;  4JLR C;  1C09 A;  1R0J A;  2JA5 A;  3PKJ A;  1YUX A;  5DYI A;  2N1D B;  1A36 A;  2AQL A;  4LMO A;  4AR3 A;  4NOH A;  1VC3 B;  2PIC A;  1TWA A;  1Y69 8;  3HU1 A;  1LPQ A;  1PT0 A;  2NVX A;  1IRN A;  2X0O A;  2PI8 A;  1R49 A;  1E18 A;  1E60 A;  1SFO A;  2LCQ A;  4AI2 A;  3IAY A;  3ZG6 A;  3K57 A;  1OWB A;  2XJQ A;  2CW0 D;  1ISE A;  5FTL A;  4TPU A;  1OWC A;  1PPY A;  4FYD A;  2FIO A;  1LKP A;  2L0Z A;  3LNL A;  3M4A A;  4GA5 A;  3KYW A;  1E8J A;  4KB2 A;  3J7Y 1;  5DYG A;  2K3Q A;  3SJR A;  2JA6 A;  1ZYR D;  3K59 A;  1SMW A;  1S24 A;  3DU6 A;  1AW8 B;  1E5V A;  3QQ8 A;  4U67 1;  1K4S A;  1G8K A;  2JIM A;  3IR5 A;  2K3O A;  1TWH A;  5GAG c;  4JAE A;  2F4Q A;  1UHD A;  3K5L A;  2VPX A;  5EPP A;  2MQA A;  1YV1 A;  1IU5 A;  4GA6 A;  3HU3 A;  1WLF A;  4FXD A;  1FHH A;  3MSU A;  5MFZ A;  1R27 A;  1LKM A;  5C9H A;  3RZT A;  2MX9 A;  5C1B A;  3SS2 A;  1SMU A;  5DM7 1;  1H5N A;  3TIW A;  3GTK A;  2JI2 A;  4KDI A;  1H7V A;  2K3N A;  2NYA A;  1WQF A;  4KB4 A;  4OYD B;  3LR8 A;  1T9P A;  2VPY A;  3H0G A;  2JI3 A;  2KN9 A;  5MFP A;  2PVX A;  1AA6 A;  3PZA A;  2Z3R B;  1ZRP A;  2M4Y A;  5GAD c;  2X0Q A;  4FGU A;  1WQH A;  2K2D A;  1CAD A;  2V45 A;  4AHC A;  4AI3 A;  1PQF A;  3LR6 A;  4AHX A;  4AYB A;  2Z3Q B;  3FKI A;  1SC7 A;  2JA7 A;  1Y1W A;  3GTQ A;  1YNJ D;  3PKI A;  2A69 D;  4ME3 A;  5GLF A;  1H0H A;  1PQH A;  3B08 B;  2JIP A;  1TWG A;  2JIR A;  3CF2 A;  4NOM A;  2B9S B;  4AOK B;  3K35 A;  4KC6 A;  1VCX A;  1EK8 A;  4KO8 A;  2R93 A;  4K9F A;  3QC8 A;  4F3E A;  1A31 A;  4JAG A;  4AHW A;  1CR5 A;  3QWZ A;  3WWL A;  3RYG A;  4UY8 1;  1G8J A;  3U4Q A;  1IU6 A;  3P9A A;  3GTM A;  2FIP A;  2VL6 A;  1BQ9 A;  2G5D A;  2R7Z A;  2VK9 A;  1MIU A;  3KYX A;  4AZD A;  2A6E D;  1EJ9 A;  3J7Z 1; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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