2WXZA

Crystal structure of rat angiotensinogen in c2 space group
Total Genus 105
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
105
sequence length
445
structure length
422
Chain Sequence
HPFHLLYYSKSTCAQTLPEPTFEPVPIQAKTSPVDEKTLRDKLVLATEKLEAEDRQRAAQVAMIANFVGFRMYKMLSEARVASGAVLSPPALFGTLVSFYLGSLDPTASQLQVLLGVPVKEGDCTSRLDGHKVLTALQAVQGLLVTPLLQSTVVGLFTAPGLRLKQPFVESLGPFTPAIFPRSLDLSTDPVLAAQKINRFVQAVTGWKMNLPLEGVSTDSTLFFNTYVHFQGKMRGFSQLTGLHEFWVDNSTSVSVPMLSGTGNFQHWSDAQNNFSVTRVPLGESVTLLLIQPQCASDLDRVEVLVFQHDFLTWIKNPPPRAIRLTLPQLEIRGSYNLQDLLAQAKLSTLLGAEANLGKMGDTNPRVGEVLNSILLELQAGEAQQPGSPEVLDVTLSSPFLFAIYERDSGALHFLGRVDNPQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hormone
molecule keywords ANGIOTENSINOGEN
publication title A Redox Switch in Angiotensinogen Modulates Angiotensin Release.
pubmed doi rcsb
source organism Rattus norvegicus
total genus 105
structure length 422
sequence length 445
ec nomenclature
pdb deposition date 2009-11-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00079 Serpin Serpin (serine protease inhibitor)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.39.10 Mainly Beta Roll Alpha-1-antitrypsin; domain 1 Alpha-1-antitrypsin, domain 1 2wxzA01
3.30.497.10 Alpha Beta 2-Layer Sandwich Antithrombin; Chain I, domain 2 Antithrombin, subunit I, domain 2 2wxzA02
2H4QA 5CE0A 1HP7A 5CDZA 3NDFA 3KCGI 1B3KA 4BB2A 2R9YA 1DZHL 1LK6I 4AU2A 1TB6I 4PYWA 1ATUA 2B4XL 4P0OA 4AU4A 1A7CA 5C98A 9APIA 1IZ2A 3OZQA 1WZ9A 2WY0C 4KDSA 1DZGI 1HLEA 3UT3A 3Q02A 2ZNHA 1DVNA 2WXZC 5BRRI 2CEOA 3DLWA 1QMBA 4DTEA 3CAAA 1ANTI 2ARRA 1XU8A 4IF8A 3CWLA 1JTIA 3DRUA 1AZXI 4IC0A 2B5TI 4ZK3A 1DZHI 1SEKA 1MTPA 2B4XI 5IO1A 3ZHAA 2WXYC 4ROBA 2HIJL 1JJOC 3CVMA 2OAYA 1OYHL 2VDYA 1EZXA 5CDXA 3NDDA 2BEHL 1JVQI 3B9FI 2OL2A 1JMOA 1OVAC 2DUTA 4EB1L 2WXWA 1IMVA 1KCTA 2XN3A 3DY0A 3F1SA 3F02A 4YIAA 1JRRA 1PSIA 1C8OA 1BY7A 1E04I 4GA7A 3T1PA 2XN5A 9PAIA 4C49A 1AS4A 1R1LI 3NE4A 4RO9A 3NDAA 4AFXA 1M93B 3CWMA 3EVJI 2HIJI 4AJTA 2XN7A 1SNGA 2WXZA 3STOA 1OYHI 1D5SA 1K9OI 1QMNA 1UHGA 2BEHI 1ATTA 2XN6A 5HGCA 3R4LA 4EB1I 1C5GA 1QLPA 3VVJA 1BR8I 3F5NA 1OC0A 4AU3A 2ACHA 3PZFA 1DB2A 5EI0A 4Y40A 1LQ8A 2H4RA 2D26A 2RIWA 1DVMA 7APIA 2ZV6A 2VH4A 2V95A 1E03I 1E05I 1JMJA 2WXXA 4C41A 4Y3KA 2WY1A 4DY0A 3LW2A 3EOXA 4CAAA 1LJ5A 2QUGA 3DRMA 1SR5A 3LE2A 1YXAA 1ATHA 1XQJA 4P0FA 2HI9A 2GD4C 2PEEA 3Q03A 1XQGA 4DY7C 4G8RA 4X30A 2H4PA 4ZK0A 2PEFA 5INWA 4ROAA 3FGQA 4AQHA 4AU3B 1OPHA 3PB1I 8APIA 4RSQA 1DZGL 4AJUA 2RIVA 2ANTI 4G8OA 4R9IA 2ARQA 1OVAA 1NQ9I 1OVAB 1T1FA 1OO8A 3H5CA 1F0CA 2VDXA
chains in the Genus database with same CATH superfamily
2H4QA 5CE0A 1HP7A 5CDZA 3NDFA 3KCGI 1B3KA 4BB2A 2R9YA 1DZHL 1LK6I 4AU2A 1TB6I 4PYWA 1ATUA 2B4XL 4P0OA 4AU4A 1A7CA 5C98A 9APIA 1IZ2A 3OZQA 1WZ9A 2WY0C 4KDSA 1DZGI 1HLEA 3UT3A 3Q02A 2ZNHA 1DVNA 2WXZC 5BRRI 2CEOA 3DLWA 1QMBA 4DTEA 3CAAA 1ANTI 2ARRA 1XU8A 4IF8A 3CWLA 1JTIA 3DRUA 1AZXI 4IC0A 2B5TI 4ZK3A 1DZHI 1SEKA 1MTPA 2B4XI 5IO1A 3ZHAA 2WXYC 4ROBA 2HIJL 1JJOC 3CVMA 2OAYA 1OYHL 2VDYA 1EZXA 5CDXA 3NDDA 2BEHL 1JVQI 3B9FI 2OL2A 1JMOA 1OVAC 2DUTA 4EB1L 2WXWA 1IMVA 1KCTA 2XN3A 3DY0A 3F1SA 3F02A 4YIAA 1JRRA 1PSIA 1C8OA 1BY7A 1E04I 4GA7A 3T1PA 2XN5A 9PAIA 4C49A 1AS4A 1R1LI 3NE4A 4RO9A 3NDAA 4AFXA 1M93B 3CWMA 3EVJI 2HIJI 4AJTA 2XN7A 1SNGA 2WXZA 3STOA 1OYHI 1D5SA 1K9OI 1QMNA 1UHGA 2BEHI 1ATTA 2XN6A 5HGCA 3R4LA 4EB1I 1C5GA 1QLPA 3VVJA 1BR8I 3F5NA 1OC0A 4AU3A 2ACHA 3PZFA 1DB2A 5EI0A 4Y40A 1LQ8A 2H4RA 2D26A 2RIWA 1DVMA 7APIA 2ZV6A 2VH4A 2V95A 1E03I 1E05I 1JMJA 2WXXA 4C41A 4Y3KA 2WY1A 4DY0A 3LW2A 3EOXA 4CAAA 1LJ5A 2QUGA 3DRMA 1SR5A 3LE2A 1YXAA 1ATHA 1XQJA 4P0FA 2HI9A 2GD4C 2PEEA 3Q03A 1XQGA 4DY7C 4G8RA 4X30A 2H4PA 4ZK0A 2PEFA 5INWA 4ROAA 3FGQA 4AQHA 4AU3B 1OPHA 3PB1I 8APIA 4RSQA 1DZGL 4AJUA 2RIVA 2ANTI 4G8OA 4R9IA 2ARQA 1OVAA 1NQ9I 1OVAB 1T1FA 1OO8A 3H5CA 1F0CA 2VDXA
chains in the Genus database with same CATH topology
2H4QA 5CE0A 1HP7A 5CDZA 3NDFA 3KCGI 1B3KA 4BB2A 2R9YA 1DZHL 1LK6I 4AU2A 1TB6I 4PYWA 1ATUA 2B4XL 4P0OA 4AU4A 1A7CA 5C98A 9APIA 1IZ2A 3OZQA 1WZ9A 2WY0C 4KDSA 1DZGI 1HLEA 3UT3A 3Q02A 2ZNHA 1DVNA 2WXZC 5BRRI 2CEOA 3DLWA 1QMBA 4DTEA 3CAAA 1ANTI 2ARRA 1XU8A 4IF8A 3CWLA 1JTIA 3DRUA 1AZXI 4IC0A 2B5TI 4ZK3A 1DZHI 1SEKA 1MTPA 2B4XI 5IO1A 3ZHAA 2WXYC 4ROBA 2HIJL 1JJOC 3CVMA 2OAYA 1OYHL 2VDYA 1EZXA 5CDXA 3NDDA 2BEHL 1JVQI 3B9FI 2OL2A 1JMOA 1OVAC 2DUTA 4EB1L 2WXWA 1IMVA 1KCTA 2XN3A 3DY0A 3F1SA 3F02A 4YIAA 1JRRA 1PSIA 1C8OA 1BY7A 1E04I 4GA7A 3T1PA 2XN5A 9PAIA 4C49A 1AS4A 1R1LI 3NE4A 4RO9A 3NDAA 4AFXA 1M93B 3CWMA 3EVJI 2HIJI 4AJTA 2XN7A 1SNGA 2WXZA 3STOA 1OYHI 1D5SA 1K9OI 1QMNA 1UHGA 2BEHI 1ATTA 2XN6A 5HGCA 3R4LA 4EB1I 1C5GA 1QLPA 3VVJA 1BR8I 3F5NA 1OC0A 4AU3A 2ACHA 3PZFA 1DB2A 5EI0A 4Y40A 1LQ8A 2H4RA 2D26A 2RIWA 1DVMA 7APIA 2ZV6A 2VH4A 2V95A 1E03I 1E05I 1JMJA 2WXXA 4C41A 4Y3KA 2WY1A 4DY0A 3LW2A 3EOXA 4CAAA 1LJ5A 2QUGA 3DRMA 1SR5A 3LE2A 1YXAA 1ATHA 1XQJA 4P0FA 2HI9A 2GD4C 2PEEA 3Q03A 1XQGA 4DY7C 4G8RA 4X30A 2H4PA 4ZK0A 2PEFA 5INWA 4ROAA 3FGQA 4AQHA 4AU3B 1OPHA 3PB1I 8APIA 4RSQA 1DZGL 4AJUA 2RIVA 2ANTI 4G8OA 4R9IA 2ARQA 1OVAA 1NQ9I 1OVAB 1T1FA 1OO8A 3H5CA 1F0CA 2VDXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2H4Q A;  5CE0 A;  1HP7 A;  5CDZ A;  3NDF A;  3KCG I;  1B3K A;  4BB2 A;  2R9Y A;  1DZH L;  1LK6 I;  4AU2 A;  1TB6 I;  4PYW A;  1ATU A;  2B4X L;  4P0O A;  4AU4 A;  1A7C A;  5C98 A;  9API A;  1IZ2 A;  3OZQ A;  1WZ9 A;  2WY0 C;  4KDS A;  1DZG I;  1HLE A;  3UT3 A;  3Q02 A;  2ZNH A;  1DVN A;  2WXZ C;  5BRR I;  2CEO A;  3DLW A;  1QMB A;  4DTE A;  3CAA A;  1ANT I;  2ARR A;  1XU8 A;  4IF8 A;  3CWL A;  1JTI A;  3DRU A;  1AZX I;  4IC0 A;  2B5T I;  4ZK3 A;  1DZH I;  1SEK A;  1MTP A;  2B4X I;  5IO1 A;  3ZHA A;  2WXY C;  4ROB A;  2HIJ L;  1JJO C;  3CVM A;  2OAY A;  1OYH L;  2VDY A;  1EZX A;  5CDX A;  3NDD A;  2BEH L;  1JVQ I;  3B9F I;  2OL2 A;  1JMO A;  1OVA C;  2DUT A;  4EB1 L;  2WXW A;  1IMV A;  1KCT A;  2XN3 A;  3DY0 A;  3F1S A;  3F02 A;  4YIA A;  1JRR A;  1PSI A;  1C8O A;  1BY7 A;  1E04 I;  4GA7 A;  3T1P A;  2XN5 A;  9PAI A;  4C49 A;  1AS4 A;  1R1L I;  3NE4 A;  4RO9 A;  3NDA A;  4AFX A;  1M93 B;  3CWM A;  3EVJ I;  2HIJ I;  4AJT A;  2XN7 A;  1SNG A;  2WXZ A;  3STO A;  1OYH I;  1D5S A;  1K9O I;  1QMN A;  1UHG A;  2BEH I;  1ATT A;  2XN6 A;  5HGC A;  3R4L A;  4EB1 I;  1C5G A;  1QLP A;  3VVJ A;  1BR8 I;  3F5N A;  1OC0 A;  4AU3 A;  2ACH A;  3PZF A;  1DB2 A;  5EI0 A;  4Y40 A;  1LQ8 A;  2H4R A;  2D26 A;  2RIW A;  1DVM A;  7API A;  2ZV6 A;  2VH4 A;  2V95 A;  1E03 I;  1E05 I;  1JMJ A;  2WXX A;  4C41 A;  4Y3K A;  2WY1 A;  4DY0 A;  3LW2 A;  3EOX A;  4CAA A;  1LJ5 A;  2QUG A;  3DRM A;  1SR5 A;  3LE2 A;  1YXA A;  1ATH A;  1XQJ A;  4P0F A;  2HI9 A;  2GD4 C;  2PEE A;  3Q03 A;  1XQG A;  4DY7 C;  4G8R A;  4X30 A;  2H4P A;  4ZK0 A;  2PEF A;  5INW A;  4ROA A;  3FGQ A;  4AQH A;  4AU3 B;  1OPH A;  3PB1 I;  8API A;  4RSQ A;  1DZG L;  4AJU A;  2RIV A;  2ANT I;  4G8O A;  4R9I A;  2ARQ A;  1OVA A;  1NQ9 I;  1OVA B;  1T1F A;  1OO8 A;  3H5C A;  1F0C A;  2VDX A; 
#chains in the Genus database with same CATH topology
 2H4Q A;  5CE0 A;  1HP7 A;  5CDZ A;  3NDF A;  3KCG I;  1B3K A;  4BB2 A;  2R9Y A;  1DZH L;  1LK6 I;  4AU2 A;  1TB6 I;  4PYW A;  1ATU A;  2B4X L;  4P0O A;  4AU4 A;  1A7C A;  5C98 A;  9API A;  1IZ2 A;  3OZQ A;  1WZ9 A;  2WY0 C;  4KDS A;  1DZG I;  1HLE A;  3UT3 A;  3Q02 A;  2ZNH A;  1DVN A;  2WXZ C;  5BRR I;  2CEO A;  3DLW A;  1QMB A;  4DTE A;  3CAA A;  1ANT I;  2ARR A;  1XU8 A;  4IF8 A;  3CWL A;  1JTI A;  3DRU A;  1AZX I;  4IC0 A;  2B5T I;  4ZK3 A;  1DZH I;  1SEK A;  1MTP A;  2B4X I;  5IO1 A;  3ZHA A;  2WXY C;  4ROB A;  2HIJ L;  1JJO C;  3CVM A;  2OAY A;  1OYH L;  2VDY A;  1EZX A;  5CDX A;  3NDD A;  2BEH L;  1JVQ I;  3B9F I;  2OL2 A;  1JMO A;  1OVA C;  2DUT A;  4EB1 L;  2WXW A;  1IMV A;  1KCT A;  2XN3 A;  3DY0 A;  3F1S A;  3F02 A;  4YIA A;  1JRR A;  1PSI A;  1C8O A;  1BY7 A;  1E04 I;  4GA7 A;  3T1P A;  2XN5 A;  9PAI A;  4C49 A;  1AS4 A;  1R1L I;  3NE4 A;  4RO9 A;  3NDA A;  4AFX A;  1M93 B;  3CWM A;  3EVJ I;  2HIJ I;  4AJT A;  2XN7 A;  1SNG A;  2WXZ A;  3STO A;  1OYH I;  1D5S A;  1K9O I;  1QMN A;  1UHG A;  2BEH I;  1ATT A;  2XN6 A;  5HGC A;  3R4L A;  4EB1 I;  1C5G A;  1QLP A;  3VVJ A;  1BR8 I;  3F5N A;  1OC0 A;  4AU3 A;  2ACH A;  3PZF A;  1DB2 A;  5EI0 A;  4Y40 A;  1LQ8 A;  2H4R A;  2D26 A;  2RIW A;  1DVM A;  7API A;  2ZV6 A;  2VH4 A;  2V95 A;  1E03 I;  1E05 I;  1JMJ A;  2WXX A;  4C41 A;  4Y3K A;  2WY1 A;  4DY0 A;  3LW2 A;  3EOX A;  4CAA A;  1LJ5 A;  2QUG A;  3DRM A;  1SR5 A;  3LE2 A;  1YXA A;  1ATH A;  1XQJ A;  4P0F A;  2HI9 A;  2GD4 C;  2PEE A;  3Q03 A;  1XQG A;  4DY7 C;  4G8R A;  4X30 A;  2H4P A;  4ZK0 A;  2PEF A;  5INW A;  4ROA A;  3FGQ A;  4AQH A;  4AU3 B;  1OPH A;  3PB1 I;  8API A;  4RSQ A;  1DZG L;  4AJU A;  2RIV A;  2ANT I;  4G8O A;  4R9I A;  2ARQ A;  1OVA A;  1NQ9 I;  1OVA B;  1T1F A;  1OO8 A;  3H5C A;  1F0C A;  2VDX A; 
#chains in the Genus database with same CATH homology
 2H4Q A;  5CE0 A;  1HP7 A;  5CDZ A;  3NDF A;  3KCG I;  1B3K A;  4BB2 A;  2R9Y A;  1DZH L;  1LK6 I;  4AU2 A;  1TB6 I;  4PYW A;  1ATU A;  2B4X L;  4P0O A;  4AU4 A;  1A7C A;  5C98 A;  9API A;  1IZ2 A;  3OZQ A;  1WZ9 A;  2WY0 C;  4KDS A;  1DZG I;  1HLE A;  3UT3 A;  3Q02 A;  2ZNH A;  1DVN A;  2WXZ C;  5BRR I;  2CEO A;  3DLW A;  1QMB A;  4DTE A;  3CAA A;  1ANT I;  2ARR A;  1XU8 A;  4IF8 A;  3CWL A;  1JTI A;  3DRU A;  1AZX I;  4IC0 A;  2B5T I;  4ZK3 A;  1DZH I;  1SEK A;  1MTP A;  2B4X I;  5IO1 A;  3ZHA A;  2WXY C;  4ROB A;  2HIJ L;  1JJO C;  3CVM A;  2OAY A;  1OYH L;  2VDY A;  1EZX A;  5CDX A;  3NDD A;  2BEH L;  1JVQ I;  3B9F I;  2OL2 A;  1JMO A;  1OVA C;  2DUT A;  4EB1 L;  2WXW A;  1IMV A;  1KCT A;  2XN3 A;  3DY0 A;  3F1S A;  3F02 A;  4YIA A;  1JRR A;  1PSI A;  1C8O A;  1BY7 A;  1E04 I;  4GA7 A;  3T1P A;  2XN5 A;  9PAI A;  4C49 A;  1AS4 A;  1R1L I;  3NE4 A;  4RO9 A;  3NDA A;  4AFX A;  1M93 B;  3CWM A;  3EVJ I;  2HIJ I;  4AJT A;  2XN7 A;  1SNG A;  2WXZ A;  3STO A;  1OYH I;  1D5S A;  1K9O I;  1QMN A;  1UHG A;  2BEH I;  1ATT A;  2XN6 A;  5HGC A;  3R4L A;  4EB1 I;  1C5G A;  1QLP A;  3VVJ A;  1BR8 I;  3F5N A;  1OC0 A;  4AU3 A;  2ACH A;  3PZF A;  1DB2 A;  5EI0 A;  4Y40 A;  1LQ8 A;  2H4R A;  2D26 A;  2RIW A;  1DVM A;  7API A;  2ZV6 A;  2VH4 A;  2V95 A;  1E03 I;  1E05 I;  1JMJ A;  2WXX A;  4C41 A;  4Y3K A;  2WY1 A;  4DY0 A;  3LW2 A;  3EOX A;  4CAA A;  1LJ5 A;  2QUG A;  3DRM A;  1SR5 A;  3LE2 A;  1YXA A;  1ATH A;  1XQJ A;  4P0F A;  2HI9 A;  2GD4 C;  2PEE A;  3Q03 A;  1XQG A;  4DY7 C;  4G8R A;  4X30 A;  2H4P A;  4ZK0 A;  2PEF A;  5INW A;  4ROA A;  3FGQ A;  4AQH A;  4AU3 B;  1OPH A;  3PB1 I;  8API A;  4RSQ A;  1DZG L;  4AJU A;  2RIV A;  2ANT I;  4G8O A;  4R9I A;  2ARQ A;  1OVA A;  1NQ9 I;  1OVA B;  1T1F A;  1OO8 A;  3H5C A;  1F0C A;  2VDX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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