2XN6A

Crystal structure of thyroxine-binding globulin complexed with thyroxine-fluoresein
Total Genus 105
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
105
sequence length
337
structure length
337
Chain Sequence
LYKMSSINADFAFNLYRRFTVETPDKNIFFSPVSISAALVMLSFGACCSTQTEIVETLGFNLTDTPMVEIQHGFQHLICSLNFPKKELELQIGNALFIGKHLKPLAKFLNDVKTLYETEVFSTDFSNISAAKQEINSHVEMQTKGKVVGLIQDLKPNTIMVLVNYIHFKAQWANPFDPSKTEDSSSFLIDKTTTVQVPMMHQMDQYYHLVDMELNCTVLQMDYSKNALALFVLPKEGQMESVEAAMSSKTLKKWNRLLQKGWVDLFVPKFSISATYDLGATLLKMGIQHAYSENADFSGLTEDNGLKLSNAAHKAVLHIGEKGTEAAGAMFLEAIPR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport
molecule keywords THYROXINE-BINDING GLOBULIN
publication title Allosteric Modulation of Hormone Release from Thyroxine and Corticosteroid Binding-Globulins.
pubmed doi rcsb
source organism Homo sapiens
total genus 105
structure length 337
sequence length 337
ec nomenclature
pdb deposition date 2010-07-30
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.39.10 Mainly Beta Roll Alpha-1-antitrypsin; domain 1 Alpha-1-antitrypsin, domain 1 2xn6A02
3.30.497.10 Alpha Beta 2-Layer Sandwich Antithrombin; Chain I, domain 2 Antithrombin, subunit I, domain 2 2xn6A01
1M93B 2XN6A 5CDXA 4P0OA 1SNGA 1NQ9I 4EB1L 2BEHI 2H4RA 1C8OA 3CWMA 2HIJL 2R9YA 2VH4A 3DRUA 4G8OA 1AZXI 2RIVA 2CEOA 2ZV6A 4IC0A 3UT3A 1IMVA 1ATHA 2XN7A 1DZHL 2B4XI 1WZ9A 4IF8A 1E04I 3R4LA 1TB6I 3LE2A 3EVJI 5INWA 1OYHI 5BRRI 4ZK0A 4P0FA 1DVMA 1E03I 2B4XL 3H5CA 2GD4C 2ZNHA 4CAAA 2RIWA 4Y40A 1UHGA 3F5NA 1JMOA 5IO1A 3ZHAA 1PSIA 3NDAA 1ATUA 5CE0A 2HI9A 3CVMA 2WY0C 2DUTA 1DB2A 1JTIA 4PYWA 4ZK3A 4AU2A 2QUGA 4ROBA 1JRRA 4RO9A 3STOA 4C49A 1BY7A 3NDDA 5EI0A 2BEHL 9APIA 1XQGA 1OC0A 3CWLA 4R9IA 3VVJA 1OVAA 1JVQI 5HGCA 2ANTI 1KCTA 2VDYA 1HLEA 1OYHL 4DY0A 1ANTI 1OVAC 4AU4A 1YXAA 1EZXA 1ATTA 1JMJA 2XN3A 3F02A 3NE4A 4BB2A 1T1FA 1E05I 1K9OI 4C41A 1BR8I 3PZFA 3FGQA 1A7CA 2OL2A 1OVAB 2XN5A 4X30A 4DTEA 9PAIA 7APIA 4AU3A 1C5GA 3LW2A 3KCGI 4RSQA 1DZGI 1OPHA 2D26A 2H4QA 4AFXA 1MTPA 3DRMA 3Q03A 2ACHA 4Y3KA 4AJUA 2PEFA 2WXYC 8APIA 1D5SA 1QLPA 2H4PA 1LJ5A 4EB1I 1AS4A 2HIJI 2WXZA 2ARRA 3EOXA 2PEEA 1XQJA 4GA7A 1R1LI 2WXZC 2ARQA 1DZHI 1LQ8A 3B9FI 1SEKA 1QMBA 1XU8A 1HP7A 4G8RA 1DVNA 2B5TI 4KDSA 3NDFA 3PB1I 3F1SA 3DY0A 1DZGL 1JJOC 2WXXA 3T1PA 2WXWA 2V95A 1SR5A 2OAYA 4AJTA 4AQHA 4ROAA 1OO8A 3OZQA 5CDZA 1IZ2A 4YIAA 4AU3B 5C98A 3DLWA 2WY1A 1B3KA 3Q02A 4DY7C 1F0CA 3CAAA 1QMNA 2VDXA 1LK6I
chains in the Genus database with same CATH superfamily
1M93B 2XN6A 5CDXA 4P0OA 1SNGA 1NQ9I 4EB1L 2BEHI 2H4RA 1C8OA 3CWMA 2HIJL 2R9YA 2VH4A 3DRUA 4G8OA 1AZXI 2RIVA 2CEOA 2ZV6A 4IC0A 3UT3A 1IMVA 1ATHA 2XN7A 1DZHL 2B4XI 1WZ9A 4IF8A 1E04I 3R4LA 1TB6I 3LE2A 3EVJI 5INWA 1OYHI 5BRRI 4ZK0A 4P0FA 1DVMA 1E03I 2B4XL 3H5CA 2GD4C 2ZNHA 4CAAA 2RIWA 4Y40A 1UHGA 3F5NA 1JMOA 5IO1A 3ZHAA 1PSIA 3NDAA 1ATUA 5CE0A 2HI9A 3CVMA 2WY0C 2DUTA 1DB2A 1JTIA 4PYWA 4ZK3A 4AU2A 2QUGA 4ROBA 1JRRA 4RO9A 3STOA 4C49A 1BY7A 3NDDA 5EI0A 2BEHL 9APIA 1XQGA 1OC0A 3CWLA 4R9IA 3VVJA 1OVAA 1JVQI 5HGCA 2ANTI 1KCTA 2VDYA 1HLEA 1OYHL 4DY0A 1ANTI 1OVAC 4AU4A 1YXAA 1EZXA 1ATTA 1JMJA 2XN3A 3F02A 3NE4A 4BB2A 1T1FA 1E05I 1K9OI 4C41A 1BR8I 3PZFA 3FGQA 1A7CA 2OL2A 1OVAB 2XN5A 4X30A 4DTEA 9PAIA 7APIA 4AU3A 1C5GA 3LW2A 3KCGI 4RSQA 1DZGI 1OPHA 2D26A 2H4QA 4AFXA 1MTPA 3DRMA 3Q03A 2ACHA 4Y3KA 4AJUA 2PEFA 2WXYC 8APIA 1D5SA 1QLPA 2H4PA 1LJ5A 4EB1I 1AS4A 2HIJI 2WXZA 2ARRA 3EOXA 2PEEA 1XQJA 4GA7A 1R1LI 2WXZC 2ARQA 1DZHI 1LQ8A 3B9FI 1SEKA 1QMBA 1XU8A 1HP7A 4G8RA 1DVNA 2B5TI 4KDSA 3NDFA 3PB1I 3F1SA 3DY0A 1DZGL 1JJOC 2WXXA 3T1PA 2WXWA 2V95A 1SR5A 2OAYA 4AJTA 4AQHA 4ROAA 1OO8A 3OZQA 5CDZA 1IZ2A 4YIAA 4AU3B 5C98A 3DLWA 2WY1A 1B3KA 3Q02A 4DY7C 1F0CA 3CAAA 1QMNA 2VDXA 1LK6I
chains in the Genus database with same CATH topology
1M93B 2XN6A 5CDXA 4P0OA 1SNGA 1NQ9I 4EB1L 2BEHI 2H4RA 1C8OA 3CWMA 2HIJL 2R9YA 2VH4A 3DRUA 4G8OA 1AZXI 2RIVA 2CEOA 2ZV6A 4IC0A 3UT3A 1IMVA 1ATHA 2XN7A 1DZHL 2B4XI 1WZ9A 4IF8A 1E04I 3R4LA 1TB6I 3LE2A 3EVJI 5INWA 1OYHI 5BRRI 4ZK0A 4P0FA 1DVMA 1E03I 2B4XL 3H5CA 2GD4C 2ZNHA 4CAAA 2RIWA 4Y40A 1UHGA 3F5NA 1JMOA 5IO1A 3ZHAA 1PSIA 3NDAA 1ATUA 5CE0A 2HI9A 3CVMA 2WY0C 2DUTA 1DB2A 1JTIA 4PYWA 4ZK3A 4AU2A 2QUGA 4ROBA 1JRRA 4RO9A 3STOA 4C49A 1BY7A 3NDDA 5EI0A 2BEHL 9APIA 1XQGA 1OC0A 3CWLA 4R9IA 3VVJA 1OVAA 1JVQI 5HGCA 2ANTI 1KCTA 2VDYA 1HLEA 1OYHL 4DY0A 1ANTI 1OVAC 4AU4A 1YXAA 1EZXA 1ATTA 1JMJA 2XN3A 3F02A 3NE4A 4BB2A 1T1FA 1E05I 1K9OI 4C41A 1BR8I 3PZFA 3FGQA 1A7CA 2OL2A 1OVAB 2XN5A 4X30A 4DTEA 9PAIA 7APIA 4AU3A 1C5GA 3LW2A 3KCGI 4RSQA 1DZGI 1OPHA 2D26A 2H4QA 4AFXA 1MTPA 3DRMA 3Q03A 2ACHA 4Y3KA 4AJUA 2PEFA 2WXYC 8APIA 1D5SA 1QLPA 2H4PA 1LJ5A 4EB1I 1AS4A 2HIJI 2WXZA 2ARRA 3EOXA 2PEEA 1XQJA 4GA7A 1R1LI 2WXZC 2ARQA 1DZHI 1LQ8A 3B9FI 1SEKA 1QMBA 1XU8A 1HP7A 4G8RA 1DVNA 2B5TI 4KDSA 3NDFA 3PB1I 3F1SA 3DY0A 1DZGL 1JJOC 2WXXA 3T1PA 2WXWA 2V95A 1SR5A 2OAYA 4AJTA 4AQHA 4ROAA 1OO8A 3OZQA 5CDZA 1IZ2A 4YIAA 4AU3B 5C98A 3DLWA 2WY1A 1B3KA 3Q02A 4DY7C 1F0CA 3CAAA 1QMNA 2VDXA 1LK6I
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1M93 B;  2XN6 A;  5CDX A;  4P0O A;  1SNG A;  1NQ9 I;  4EB1 L;  2BEH I;  2H4R A;  1C8O A;  3CWM A;  2HIJ L;  2R9Y A;  2VH4 A;  3DRU A;  4G8O A;  1AZX I;  2RIV A;  2CEO A;  2ZV6 A;  4IC0 A;  3UT3 A;  1IMV A;  1ATH A;  2XN7 A;  1DZH L;  2B4X I;  1WZ9 A;  4IF8 A;  1E04 I;  3R4L A;  1TB6 I;  3LE2 A;  3EVJ I;  5INW A;  1OYH I;  5BRR I;  4ZK0 A;  4P0F A;  1DVM A;  1E03 I;  2B4X L;  3H5C A;  2GD4 C;  2ZNH A;  4CAA A;  2RIW A;  4Y40 A;  1UHG A;  3F5N A;  1JMO A;  5IO1 A;  3ZHA A;  1PSI A;  3NDA A;  1ATU A;  5CE0 A;  2HI9 A;  3CVM A;  2WY0 C;  2DUT A;  1DB2 A;  1JTI A;  4PYW A;  4ZK3 A;  4AU2 A;  2QUG A;  4ROB A;  1JRR A;  4RO9 A;  3STO A;  4C49 A;  1BY7 A;  3NDD A;  5EI0 A;  2BEH L;  9API A;  1XQG A;  1OC0 A;  3CWL A;  4R9I A;  3VVJ A;  1OVA A;  1JVQ I;  5HGC A;  2ANT I;  1KCT A;  2VDY A;  1HLE A;  1OYH L;  4DY0 A;  1ANT I;  1OVA C;  4AU4 A;  1YXA A;  1EZX A;  1ATT A;  1JMJ A;  2XN3 A;  3F02 A;  3NE4 A;  4BB2 A;  1T1F A;  1E05 I;  1K9O I;  4C41 A;  1BR8 I;  3PZF A;  3FGQ A;  1A7C A;  2OL2 A;  1OVA B;  2XN5 A;  4X30 A;  4DTE A;  9PAI A;  7API A;  4AU3 A;  1C5G A;  3LW2 A;  3KCG I;  4RSQ A;  1DZG I;  1OPH A;  2D26 A;  2H4Q A;  4AFX A;  1MTP A;  3DRM A;  3Q03 A;  2ACH A;  4Y3K A;  4AJU A;  2PEF A;  2WXY C;  8API A;  1D5S A;  1QLP A;  2H4P A;  1LJ5 A;  4EB1 I;  1AS4 A;  2HIJ I;  2WXZ A;  2ARR A;  3EOX A;  2PEE A;  1XQJ A;  4GA7 A;  1R1L I;  2WXZ C;  2ARQ A;  1DZH I;  1LQ8 A;  3B9F I;  1SEK A;  1QMB A;  1XU8 A;  1HP7 A;  4G8R A;  1DVN A;  2B5T I;  4KDS A;  3NDF A;  3PB1 I;  3F1S A;  3DY0 A;  1DZG L;  1JJO C;  2WXX A;  3T1P A;  2WXW A;  2V95 A;  1SR5 A;  2OAY A;  4AJT A;  4AQH A;  4ROA A;  1OO8 A;  3OZQ A;  5CDZ A;  1IZ2 A;  4YIA A;  4AU3 B;  5C98 A;  3DLW A;  2WY1 A;  1B3K A;  3Q02 A;  4DY7 C;  1F0C A;  3CAA A;  1QMN A;  2VDX A;  1LK6 I; 
#chains in the Genus database with same CATH topology
 1M93 B;  2XN6 A;  5CDX A;  4P0O A;  1SNG A;  1NQ9 I;  4EB1 L;  2BEH I;  2H4R A;  1C8O A;  3CWM A;  2HIJ L;  2R9Y A;  2VH4 A;  3DRU A;  4G8O A;  1AZX I;  2RIV A;  2CEO A;  2ZV6 A;  4IC0 A;  3UT3 A;  1IMV A;  1ATH A;  2XN7 A;  1DZH L;  2B4X I;  1WZ9 A;  4IF8 A;  1E04 I;  3R4L A;  1TB6 I;  3LE2 A;  3EVJ I;  5INW A;  1OYH I;  5BRR I;  4ZK0 A;  4P0F A;  1DVM A;  1E03 I;  2B4X L;  3H5C A;  2GD4 C;  2ZNH A;  4CAA A;  2RIW A;  4Y40 A;  1UHG A;  3F5N A;  1JMO A;  5IO1 A;  3ZHA A;  1PSI A;  3NDA A;  1ATU A;  5CE0 A;  2HI9 A;  3CVM A;  2WY0 C;  2DUT A;  1DB2 A;  1JTI A;  4PYW A;  4ZK3 A;  4AU2 A;  2QUG A;  4ROB A;  1JRR A;  4RO9 A;  3STO A;  4C49 A;  1BY7 A;  3NDD A;  5EI0 A;  2BEH L;  9API A;  1XQG A;  1OC0 A;  3CWL A;  4R9I A;  3VVJ A;  1OVA A;  1JVQ I;  5HGC A;  2ANT I;  1KCT A;  2VDY A;  1HLE A;  1OYH L;  4DY0 A;  1ANT I;  1OVA C;  4AU4 A;  1YXA A;  1EZX A;  1ATT A;  1JMJ A;  2XN3 A;  3F02 A;  3NE4 A;  4BB2 A;  1T1F A;  1E05 I;  1K9O I;  4C41 A;  1BR8 I;  3PZF A;  3FGQ A;  1A7C A;  2OL2 A;  1OVA B;  2XN5 A;  4X30 A;  4DTE A;  9PAI A;  7API A;  4AU3 A;  1C5G A;  3LW2 A;  3KCG I;  4RSQ A;  1DZG I;  1OPH A;  2D26 A;  2H4Q A;  4AFX A;  1MTP A;  3DRM A;  3Q03 A;  2ACH A;  4Y3K A;  4AJU A;  2PEF A;  2WXY C;  8API A;  1D5S A;  1QLP A;  2H4P A;  1LJ5 A;  4EB1 I;  1AS4 A;  2HIJ I;  2WXZ A;  2ARR A;  3EOX A;  2PEE A;  1XQJ A;  4GA7 A;  1R1L I;  2WXZ C;  2ARQ A;  1DZH I;  1LQ8 A;  3B9F I;  1SEK A;  1QMB A;  1XU8 A;  1HP7 A;  4G8R A;  1DVN A;  2B5T I;  4KDS A;  3NDF A;  3PB1 I;  3F1S A;  3DY0 A;  1DZG L;  1JJO C;  2WXX A;  3T1P A;  2WXW A;  2V95 A;  1SR5 A;  2OAY A;  4AJT A;  4AQH A;  4ROA A;  1OO8 A;  3OZQ A;  5CDZ A;  1IZ2 A;  4YIA A;  4AU3 B;  5C98 A;  3DLW A;  2WY1 A;  1B3K A;  3Q02 A;  4DY7 C;  1F0C A;  3CAA A;  1QMN A;  2VDX A;  1LK6 I; 
#chains in the Genus database with same CATH homology
 1M93 B;  2XN6 A;  5CDX A;  4P0O A;  1SNG A;  1NQ9 I;  4EB1 L;  2BEH I;  2H4R A;  1C8O A;  3CWM A;  2HIJ L;  2R9Y A;  2VH4 A;  3DRU A;  4G8O A;  1AZX I;  2RIV A;  2CEO A;  2ZV6 A;  4IC0 A;  3UT3 A;  1IMV A;  1ATH A;  2XN7 A;  1DZH L;  2B4X I;  1WZ9 A;  4IF8 A;  1E04 I;  3R4L A;  1TB6 I;  3LE2 A;  3EVJ I;  5INW A;  1OYH I;  5BRR I;  4ZK0 A;  4P0F A;  1DVM A;  1E03 I;  2B4X L;  3H5C A;  2GD4 C;  2ZNH A;  4CAA A;  2RIW A;  4Y40 A;  1UHG A;  3F5N A;  1JMO A;  5IO1 A;  3ZHA A;  1PSI A;  3NDA A;  1ATU A;  5CE0 A;  2HI9 A;  3CVM A;  2WY0 C;  2DUT A;  1DB2 A;  1JTI A;  4PYW A;  4ZK3 A;  4AU2 A;  2QUG A;  4ROB A;  1JRR A;  4RO9 A;  3STO A;  4C49 A;  1BY7 A;  3NDD A;  5EI0 A;  2BEH L;  9API A;  1XQG A;  1OC0 A;  3CWL A;  4R9I A;  3VVJ A;  1OVA A;  1JVQ I;  5HGC A;  2ANT I;  1KCT A;  2VDY A;  1HLE A;  1OYH L;  4DY0 A;  1ANT I;  1OVA C;  4AU4 A;  1YXA A;  1EZX A;  1ATT A;  1JMJ A;  2XN3 A;  3F02 A;  3NE4 A;  4BB2 A;  1T1F A;  1E05 I;  1K9O I;  4C41 A;  1BR8 I;  3PZF A;  3FGQ A;  1A7C A;  2OL2 A;  1OVA B;  2XN5 A;  4X30 A;  4DTE A;  9PAI A;  7API A;  4AU3 A;  1C5G A;  3LW2 A;  3KCG I;  4RSQ A;  1DZG I;  1OPH A;  2D26 A;  2H4Q A;  4AFX A;  1MTP A;  3DRM A;  3Q03 A;  2ACH A;  4Y3K A;  4AJU A;  2PEF A;  2WXY C;  8API A;  1D5S A;  1QLP A;  2H4P A;  1LJ5 A;  4EB1 I;  1AS4 A;  2HIJ I;  2WXZ A;  2ARR A;  3EOX A;  2PEE A;  1XQJ A;  4GA7 A;  1R1L I;  2WXZ C;  2ARQ A;  1DZH I;  1LQ8 A;  3B9F I;  1SEK A;  1QMB A;  1XU8 A;  1HP7 A;  4G8R A;  1DVN A;  2B5T I;  4KDS A;  3NDF A;  3PB1 I;  3F1S A;  3DY0 A;  1DZG L;  1JJO C;  2WXX A;  3T1P A;  2WXW A;  2V95 A;  1SR5 A;  2OAY A;  4AJT A;  4AQH A;  4ROA A;  1OO8 A;  3OZQ A;  5CDZ A;  1IZ2 A;  4YIA A;  4AU3 B;  5C98 A;  3DLW A;  2WY1 A;  1B3K A;  3Q02 A;  4DY7 C;  1F0C A;  3CAA A;  1QMN A;  2VDX A;  1LK6 I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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