2XOZA

C-terminal cysteine rich domain of human chfr bound to amp
Total Genus 65
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
65
sequence length
240
structure length
213
Chain Sequence
PYVVCRQCPEYRRQAAQPPHCPDYVCPLQGSHALCTCCFQPMPDRRVEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Ligase
molecule keywords E3 UBIQUITIN-PROTEIN LIGASE CHFR
publication title Structural Basis of Poly(Adp-Ribose) Recognition by the Multizinc Binding Domain of Checkpoint with Forkhead-Associated and Ring Domains (Chfr).
pubmed doi rcsb
source organism Homo sapiens
total genus 65
structure length 213
sequence length 240
chains with identical sequence B
ec nomenclature ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date 2010-08-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF10283 zf-CCHH PBZ domain
A PF17979 zf-CRD Cysteine rich domain with multizinc binding regions
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.40.140 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Herpes Virus-1 2xozA01
2XP0A 2XOCA 2XOZA 2XOYA
chains in the Genus database with same CATH superfamily
2JMDA 1WEVA 2DSMA 4V3LC 3KQIA 4QQ4A 2KU3A 2RSDA 2VJFA 3O35A 2MA5A 4S3OB 2M13A 1LDKC 2BAYA 2KWKA 2D8UA 2QIZA 2KKXA 2KKYA 2JM3A 5TABA 3I2DA 4LLBA 1WEPA 4IC3A 4YBMA 4S3OC 2KYUA 3O70A 2VPGA 2L43A 4ZDTA 5G05B 3LQIA 2D8SA 2PNXA 4LK9A 1WEWA 3HCSA 5KH3A 1LDJB 1WE9A 4P5OB 5B77A 3LJUX 3T6RA 5B75A 4GB0A 2Y43A 2MT5A 2G45A 4F1PA 1WEQA 5TBNA 5B8DA 2QJ0A 2YYRA 1VYXA 4N3WA 5SVXA 3HCUA 1WEOA 2HYED 2OWAA 2KWJA 2E6SA 2MIQA 4AUQB 5TRBA 3KNVA 1X4IA 4PTBA 4L58A 3KV5A 3L11A 5K3QA 2E6RA 4PPEA 4A49A 3L1ZB 4GNGA 2VNFA 4CA1A 1IYMA 1T1HA 5C13A 5EYAF 2K16A 2L75A 5H1VA 5AIUA 5LKXA 5LKZA 5D1KB 1X4JA 1JOCA 2ECJA 2FSAA 4XI1A 3U5PA 4NN2A 1N87A 3SUBA 4LKAA 2MKEA 2MD8C 2LGLA 4YABA 2M85A 2KGGA 4MVTA 3U5NA 4I7CA 4FIPA 3SHBA 1WESA 4YBSA 2LRIC 2MNZA 5H1TA 2F6JA 2YURA 3U5OA 2ECWA 3PHDA 1VD4A 2G43A 2DJAA 4R8PK 4LADB 2EGPA 2L80A 2IDAA 4GNEA 4WA6A 3QZVA 4YADA 1U6GB 3ZNIA 2JRJA 3DPLR 2VP7A 2LAUA 2LN0A 2YSMA 2JMIA 4CCGX 4V3KC 3U5MA 3ZTGA 2EXUA 2LV9A 2VPBA 3N9LA 2H0DB 1WEUA 4A4CA 2L7PA 3FANA 4FJCA 2LGVA 1FP0A 2XOYA 2Y1NA 2CSYA 5FEYA 3ZPV1 4Z0OA 2YW8A 3RTRB 2CONA 5AITA 1WFKA 3VK6A 3ZYQA 2KIZA 5FERA 3ZVZB 3MDBC 5H1UA 5FB1A 2FFWA 3JUEA 2YVRA 3FJUB 1WENA 2LXHC 3C5KA 2CSZA 2H0DA 2K17A 2CSVA 2XP0A 2KGIA 3NG2A 4WZ0A 4TKPB 2KREA 3DWDA 5TDWA 1WILA 3O34A 5G04B 5J3XA 4R2YA 1DVPA 3PLWA 4WZ2A 3KDEC 5JG6A 3SOUA 1WIMA 3DQVR 3O37A 1F62A 2L5UA 2LGKA 2LQ6A 1X4UA 2OXQC 2KE1A 5DKAA 3M7KA 5B78A 2I50A 3LRQA 1CHCA 2E61A 2CT2A 2NAAA 1MM3A 2JMJA 2ZETC 4BBQA 4B86C 5H9MA 1JM7B 4H9DA 2KWOA 3FAOA 4AYCB 4AVXA 2EGMA 2B0OE 2YREA 2YUCA 3O33A 4UP5A 1ZBDB 5SVYA 3LDYA 2MD7B 2KWNA 4YAXA 2C2VS 2ECNA 4MSXA 3LVQE 3ZPVE 2PUYA 4Z0RA 1MM2A 4GNDA 2F6NA 2XOZA 3KV6A 5FB0A 4YBTA 3T7LA 2ECTA 4AYCA 3PURA 5B76A 2QICA 4WZ3B 2KFTA 3ASLA 3C6WA 2XEUA 3MHSA 1RMDA 5DINA 4QF3A 2G6QA 2CRWA 2YHNA 4BHWA 2LXPC 2M3HA 4ZQLA 4QF2A 2P57A 2VJFB 5TDRA 5LKTA 3Q1DA 1VFYA 2XOCA 2M6MA 2MUMA 2K4DA 3N9QA 4GNFA 4ZUXU 2M1RA 2RR4A 4UP0A 3SOWA 3MHHA 2MNYA 3LVRE 1WGMA 1E4UA 2YSJA 3IHPA 1G25A 3FL2A 4YC9A 5KH9A 4A0CD 2AN6A 4N4FA 3GV4A 2HDPA 4Q6FA 4R7EA 3N9PA 1HYJA 3O36A 2YQLA 3LQHA 5KH7A 1MBMA 1XWHA 4FO9A 3PUQA 3H7HA 2FUIA 3N9NA 1FBVA 3DDTA 3FM8C 5G0FA 3O47A 4YATA 5C11A 5B79A 5I3LA 2EODA 3M99A 2K1JA 2Y1MA 2YQMA 2MA6A 1WEMA 2VJEB 2YT5A 1V87A 4UI9B 4LJNA 3O7AA 2XB1A 3RPGB 3FEHA 3ZVYA 2CKLB 4A4BA 3M63A 3LQJA 4FK5A 3N9OA 2YHOA 4F52B 4I7DA 5SVIB 4B7YC 2LGGA 4W4UA 2ECIA 4C9ZA 4L7XA 2VJEA 2LDRA 3RPGC 1HYIA 2DX8A 2EA6A 5D1MB 3L1XA 4X3GA 2CKLA 2RI7A 4I7BA 1JM7A 1DCQA 3N9MA 1BORA 4IC2A 5D1LB 4OGCA 3M62A 2L0BA 3T9KA 2ECVA 5SVIA 2FUUA 3GL6A 3HCTA 2VPEA 4O64A 4AP4A 2VPDA 1WEEA 2JUNA 1Z60A 3V43A 2CRRA 2KR4A 3SOXA 1Z2QA 4O62A 3HTKC 2ECGA 2F42A 1K2FA 1Z6UA 2IQJA 2YU4A 2UZGA 3EB5A 5LCWB 3EB6A 4OGEA 5LKUA 3E2DA 2C2LA 2FD4A
chains in the Genus database with same CATH topology
2MKEA 5K3QA 3DWDA 2CRRA 2E61A 4O62A 4Z0OA 2CRWA 4F1PA 3FEHA 2CONA 4QQ4A 3LVQE 3DDTA 3FM8C 1DCQA 2P57A 4Z0RA 2XOYA 2XOZA 3O47A 3MDBC 3Q1DA 4OGCA 2IQJA 2XOCA 4H9DA 2LAUA 3PLWA 2FFWA 3T9KA 2M13A 3JUEA 2YVRA 5SVXA 3FJUB 3KDEC 2EGMA 2OWAA 5SVIA 2EXUA 2B0OE 2RR4A 2YREA 5SVIB 3LJUX 2DJAA 4OGEA 2CSVA 2D8UA 3E2DA 2L7PA 2XP0A 5SVYA 2FD4A 2KKXA 3LDYA 2KKYA 3M7KA 2JM3A 3LVRE 2JUNA 3SUBA 3H7HA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2XP0 A;  2XOC A;  2XOZ A;  2XOY A; 
#chains in the Genus database with same CATH topology
 2JMD A;  1WEV A;  2DSM A;  4V3L C;  3KQI A;  4QQ4 A;  2KU3 A;  2RSD A;  2VJF A;  3O35 A;  2MA5 A;  4S3O B;  2M13 A;  1LDK C;  2BAY A;  2KWK A;  2D8U A;  2QIZ A;  2KKX A;  2KKY A;  2JM3 A;  5TAB A;  3I2D A;  4LLB A;  1WEP A;  4IC3 A;  4YBM A;  4S3O C;  2KYU A;  3O70 A;  2VPG A;  2L43 A;  4ZDT A;  5G05 B;  3LQI A;  2D8S A;  2PNX A;  4LK9 A;  1WEW A;  3HCS A;  5KH3 A;  1LDJ B;  1WE9 A;  4P5O B;  5B77 A;  3LJU X;  3T6R A;  5B75 A;  4GB0 A;  2Y43 A;  2MT5 A;  2G45 A;  4F1P A;  1WEQ A;  5TBN A;  5B8D A;  2QJ0 A;  2YYR A;  1VYX A;  4N3W A;  5SVX A;  3HCU A;  1WEO A;  2HYE D;  2OWA A;  2KWJ A;  2E6S A;  2MIQ A;  4AUQ B;  5TRB A;  3KNV A;  1X4I A;  4PTB A;  4L58 A;  3KV5 A;  3L11 A;  5K3Q A;  2E6R A;  4PPE A;  4A49 A;  3L1Z B;  4GNG A;  2VNF A;  4CA1 A;  1IYM A;  1T1H A;  5C13 A;  5EYA F;  2K16 A;  2L75 A;  5H1V A;  5AIU A;  5LKX A;  5LKZ A;  5D1K B;  1X4J A;  1JOC A;  2ECJ A;  2FSA A;  4XI1 A;  3U5P A;  4NN2 A;  1N87 A;  3SUB A;  4LKA A;  2MKE A;  2MD8 C;  2LGL A;  4YAB A;  2M85 A;  2KGG A;  4MVT A;  3U5N A;  4I7C A;  4FIP A;  3SHB A;  1WES A;  4YBS A;  2LRI C;  2MNZ A;  5H1T A;  2F6J A;  2YUR A;  3U5O A;  2ECW A;  3PHD A;  1VD4 A;  2G43 A;  2DJA A;  4R8P K;  4LAD B;  2EGP A;  2L80 A;  2IDA A;  4GNE A;  4WA6 A;  3QZV A;  4YAD A;  1U6G B;  3ZNI A;  2JRJ A;  3DPL R;  2VP7 A;  2LAU A;  2LN0 A;  2YSM A;  2JMI A;  4CCG X;  4V3K C;  3U5M A;  3ZTG A;  2EXU A;  2LV9 A;  2VPB A;  3N9L A;  2H0D B;  1WEU A;  4A4C A;  2L7P A;  3FAN A;  4FJC A;  2LGV A;  1FP0 A;  2XOY A;  2Y1N A;  2CSY A;  5FEY A;  3ZPV 1;  4Z0O A;  2YW8 A;  3RTR B;  2CON A;  5AIT A;  1WFK A;  3VK6 A;  3ZYQ A;  2KIZ A;  5FER A;  3ZVZ B;  3MDB C;  5H1U A;  5FB1 A;  2FFW A;  3JUE A;  2YVR A;  3FJU B;  1WEN A;  2LXH C;  3C5K A;  2CSZ A;  2H0D A;  2K17 A;  2CSV A;  2XP0 A;  2KGI A;  3NG2 A;  4WZ0 A;  4TKP B;  2KRE A;  3DWD A;  5TDW A;  1WIL A;  3O34 A;  5G04 B;  5J3X A;  4R2Y A;  1DVP A;  3PLW A;  4WZ2 A;  3KDE C;  5JG6 A;  3SOU A;  1WIM A;  3DQV R;  3O37 A;  1F62 A;  2L5U A;  2LGK A;  2LQ6 A;  1X4U A;  2OXQ C;  2KE1 A;  5DKA A;  3M7K A;  5B78 A;  2I50 A;  3LRQ A;  1CHC A;  2E61 A;  2CT2 A;  2NAA A;  1MM3 A;  2JMJ A;  2ZET C;  4BBQ A;  4B86 C;  5H9M A;  1JM7 B;  4H9D A;  2KWO A;  3FAO A;  4AYC B;  4AVX A;  2EGM A;  2B0O E;  2YRE A;  2YUC A;  3O33 A;  4UP5 A;  1ZBD B;  5SVY A;  3LDY A;  2MD7 B;  2KWN A;  4YAX A;  2C2V S;  2ECN A;  4MSX A;  3LVQ E;  3ZPV E;  2PUY A;  4Z0R A;  1MM2 A;  4GND A;  2F6N A;  2XOZ A;  3KV6 A;  5FB0 A;  4YBT A;  3T7L A;  2ECT A;  4AYC A;  3PUR A;  5B76 A;  2QIC A;  4WZ3 B;  2KFT A;  3ASL A;  3C6W A;  2XEU A;  3MHS A;  1RMD A;  5DIN A;  4QF3 A;  2G6Q A;  2CRW A;  2YHN A;  4BHW A;  2LXP C;  2M3H A;  4ZQL A;  4QF2 A;  2P57 A;  2VJF B;  5TDR A;  5LKT A;  3Q1D A;  1VFY A;  2XOC A;  2M6M A;  2MUM A;  2K4D A;  3N9Q A;  4GNF A;  4ZUX U;  2M1R A;  2RR4 A;  4UP0 A;  3SOW A;  3MHH A;  2MNY A;  3LVR E;  1WGM A;  1E4U A;  2YSJ A;  3IHP A;  1G25 A;  3FL2 A;  4YC9 A;  5KH9 A;  4A0C D;  2AN6 A;  4N4F A;  3GV4 A;  2HDP A;  4Q6F A;  4R7E A;  3N9P A;  1HYJ A;  3O36 A;  2YQL A;  3LQH A;  5KH7 A;  1MBM A;  1XWH A;  4FO9 A;  3PUQ A;  3H7H A;  2FUI A;  3N9N A;  1FBV A;  3DDT A;  3FM8 C;  5G0F A;  3O47 A;  4YAT A;  5C11 A;  5B79 A;  5I3L A;  2EOD A;  3M99 A;  2K1J A;  2Y1M A;  2YQM A;  2MA6 A;  1WEM A;  2VJE B;  2YT5 A;  1V87 A;  4UI9 B;  4LJN A;  3O7A A;  2XB1 A;  3RPG B;  3FEH A;  3ZVY A;  2CKL B;  4A4B A;  3M63 A;  3LQJ A;  4FK5 A;  3N9O A;  2YHO A;  4F52 B;  4I7D A;  5SVI B;  4B7Y C;  2LGG A;  4W4U A;  2ECI A;  4C9Z A;  4L7X A;  2VJE A;  2LDR A;  3RPG C;  1HYI A;  2DX8 A;  2EA6 A;  5D1M B;  3L1X A;  4X3G A;  2CKL A;  2RI7 A;  4I7B A;  1JM7 A;  1DCQ A;  3N9M A;  1BOR A;  4IC2 A;  5D1L B;  4OGC A;  3M62 A;  2L0B A;  3T9K A;  2ECV A;  5SVI A;  2FUU A;  3GL6 A;  3HCT A;  2VPE A;  4O64 A;  4AP4 A;  2VPD A;  1WEE A;  2JUN A;  1Z60 A;  3V43 A;  2CRR A;  2KR4 A;  3SOX A;  1Z2Q A;  4O62 A;  3HTK C;  2ECG A;  2F42 A;  1K2F A;  1Z6U A;  2IQJ A;  2YU4 A;  2UZG A;  3EB5 A;  5LCW B;  3EB6 A;  4OGE A;  5LKU A;  3E2D A;  2C2L A;  2FD4 A; 
#chains in the Genus database with same CATH homology
 2MKE A;  5K3Q A;  3DWD A;  2CRR A;  2E61 A;  4O62 A;  4Z0O A;  2CRW A;  4F1P A;  3FEH A;  2CON A;  4QQ4 A;  3LVQ E;  3DDT A;  3FM8 C;  1DCQ A;  2P57 A;  4Z0R A;  2XOY A;  2XOZ A;  3O47 A;  3MDB C;  3Q1D A;  4OGC A;  2IQJ A;  2XOC A;  4H9D A;  2LAU A;  3PLW A;  2FFW A;  3T9K A;  2M13 A;  3JUE A;  2YVR A;  5SVX A;  3FJU B;  3KDE C;  2EGM A;  2OWA A;  5SVI A;  2EXU A;  2B0O E;  2RR4 A;  2YRE A;  5SVI B;  3LJU X;  2DJA A;  4OGE A;  2CSV A;  2D8U A;  3E2D A;  2L7P A;  2XP0 A;  5SVY A;  2FD4 A;  2KKX A;  3LDY A;  2KKY A;  3M7K A;  2JM3 A;  3LVR E;  2JUN A;  3SUB A;  3H7H A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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