2Z44A

Crystal structure of selenomethionine-labeled orf134
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
110
structure length
110
Chain Sequence
EFKKVAKETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMMLENKELVLRILTVRENLAEGVLEFLPEMVLSQIKQSNGNHRRSLLERLTQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Chaperone
molecule keywords ORF134
publication title Crystal Structure of ORF134
rcsb
source organism Synechococcus sp.
total genus 41
structure length 110
sequence length 110
ec nomenclature
pdb deposition date 2007-06-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02341 RcbX RbcX protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.210 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A 2z44A00
5BS2A 3HYBA 2Z44A 4GR6A 2PENA 5BS1A 3Q20A 2Z45A 4GR2A 2PEKA 2PEQA 2PEJA 2PEMA 2PEOA 2PEIA 2PY8A 2Z46A 3RG6C
chains in the Genus database with same CATH superfamily
2Z44A 2EG5A 1DV5A 2L4BA 3H0DA 2EIAA 2M8NA 1N8RQ 1RNIA 3CC7P 1W2BO 2EHSA 3DPHA 5KP6B 2KWLA 1IMPA 1K30A 2JU1A 2K0DX 4BPFA 2MR7A 1CEIA 1VKUA 3CXCO 2PEQA 3CCMP 1VQNP 2GDXA 5KP7B 2L22A 1KQSO 2K0XA 1NJIQ 1ACPA 4GR2A 2VLOA 3CCSP 1VQ8P 3CCLP 4PH0A 1S72P 2CNRA 3G71P 1L0HA 3G1IA 2GZJA 5F2OA 1Q81Q 5HGOA 2GYKA 2MY5A 4GR6A 1AF8A 4XFZA 2PY8A 2FADA 2XT1A 1L0IA 3CC4P 2Z46A 4U0CA 3DS3A 1UNKA 1NQ4A 1QRJA 2ERHA 2LIWA 3CCEP 3GJNA 2JB0A 3CCQP 3G21A 2PNGA 4PXHB 3DS5A 2K92A 2K0YA 4DG9A 1VQ5P 1VQMP 3DS1A 3GKLC 3GZLA 3DS2A 1Z6MA 5HVCA 5EJDA 2GDWA 2P9XA 2M5RA 2JYGA 2LKIA 4BPHA 1KLPA 2FHSC 1F80D 5EW5E 1M6NA 3G26A 4PH1A 1X3OA 2KORA 2FVFA 1Q7YQ 1VQOP 1QVFO 1FR2A 1ZMBA 3WBHA 4U0DA 1Q82Q 1YJWP 1VQ7P 1A43A 7CEIA 1QVGO 4M0IA 2AVAA 3U43A 2KG6A 5I4TG 2VSQA 1KD1Q 2PEMA 2JYLA 2KW2A 4XFXA 2KG8A 2XZ0D 2K5XA 2L0QA 4QNBA 4COPA 1AUMA 1K9MQ 3CPWO 1YHQP 2Z45A 2LL8A 3H4EA 2EFJA 2KGCA 5JPAA 5HV8A 1VQLP 1E6JP 2PENA 1D1DA 4U0FA 3H47A 3I56P 2XXMA 1YIJP 5F2KA 4R0MA 3OW2O 3CE7A 2JQ4A 3NY7B 1GPJA 2K93A 4UHPB 1YJ9P 2JO0A 2N5HA 3VRLC 3G1GA 2M8LA 2KOPA 1RO0A 2OTJP 2AFEA 5KP8B 3G6EP 1VQKP 2GZIA 4WYMA 2FACA 2QNWA 2MVVA 3HYBA 1M1KQ 2CWOA 4MRTC 3B4QA 4XRQA 2K2QA 2X2BA 1VQ9P 3E2DA 3EJDA 4H2XC 4U0BA 2LMLA 2KR5A 2KOOA 1EOQA 2CG5B 2L9FA 1IMQA 2KGAA 3CCUP 3G28A 1EIAA 1A8OA 4NEOA 1GXHA 2PEKA 2DNWA 3GZMA 3DTJA 2VLNA 2MF4A 2QEXP 2LIUA 3LRYA 4BPGA 3NTEA 2CQ8A 3CD6P 2NO8A 1JJ2O 3CCVP 2N98A 4XROA 3MGEA 3CCRP 3CCJP 2KGEA 2LPKA 3P05A 2LTEA 1IUQA 2E1MA 1BXIA 2WPTA 1RO2A 3G4SP 1T8KA 2FVEA 2OTLP 2JU2A 1Q86Q 2N6YA 1ZNVA 5DCKA 5HGNA 2PEJA 2N6ZA 1MZ8A 4H2YC 2FQ1A 1BAJA 4U0EA 5F2NA 1M74A 2GZFA 4H2WC 1M90Q 2FQ2A 2KGDA 3CMAP 1YITP 2DGYA 3DS0A 3RG2A 3DS4A 2JBGA 5BS1A 1K73Q 4IPYA 2N50A 1HQBA 2LOLA 2K94A 2GZGA 2KOQA 3B5IA 1YJNP 4HKGA 2ONTA 1VQPP 1GXGA 3HZQA 2EHTA 2FVAA 2CGQA 2FQ0A 4F37A 2VLQA 2JGPA 2ROQA 2XZ1C 2MD9A 5HGMA 3G0VA 2OARA 1M6EX 1OR5A 5CZDB 4QKOA 2KOSA 2AFDA 2QA4P 1YI2P 2KG9A 3LMOA 1VQ6P 2M8PA 3EJBA 2PEOA 1K8AQ 5HGLA 4CA3A 2BUOA 1EMVA 3M1MA 2GZEA 4COCA 1HY8A 5BS2A 3CMEP 1DNYA 1UJZA 2XV6A 2L6EA 1VQ4P 2MVUA 1AYIA 2MR8A 4IZ6A 3EJEA 3RG6C 4XFYA 4U0AA 3G29A 2JAZA 3Q20A 2BHVA 2PEIA 3CC2P 2LF4A 1VHNA 1E0HA 1KC8Q 3I55P 2AF8A 2KODA 2GDYA 2N5IA 2FAEA 2VLPA 4PWVB
chains in the Genus database with same CATH topology
5F2NA 1M74A 2Z44A 1VQKP 2EG5A 4WYMA 3DS2A 3H0DA 1M90Q 2EIAA 2M8NA 1N8RQ 3HYBA 1RNIA 3CMAP 1M1KQ 2CWOA 1YITP 2DGYA 3CC7P 3DS0A 1W2BO 3DS4A 3DPHA 2P9XA 5BS1A 1K73Q 4IPYA 1K30A 4XRQA 2JYGA 3B5IA 1VQ9P 1YJNP 3E2DA 2ONTA 4U0BA 3CXCO 1VQPP 3HZQA 1M6NA 3G26A 2PEQA 4PH1A 3CCMP 1Q7YQ 1EOQA 1VQNP 1VQOP 5HGMA 3G0VA 1QVFO 3CCUP 1KQSO 2OARA 1M6EX 3G28A 1EIAA 1NJIQ 1ZMBA 4GR2A 2QA4P 1YI2P 1A8OA 3CCSP 1VQ8P 3CCLP 4PH0A 3WBHA 4U0DA 1Q82Q 1YJWP 1VQ6P 1VQ7P 1A43A 2M8PA 2PEKA 1S72P 2PEOA 3G71P 1QVGO 3DTJA 4M0IA 1K8AQ 3G1IA 5HGLA 5I4TG 2BUOA 5F2OA 1KD1Q 1Q81Q 3M1MA 2PEMA 2JYLA 4XFXA 2QEXP 5HGOA 3LRYA 4COCA 3NTEA 4GR6A 3CD6P 1JJ2O 4XFZA 2PY8A 3CCVP 4QNBA 4COPA 1AUMA 1K9MQ 5BS2A 3CMEP 3CPWO 1YHQP 2Z45A 2XT1A 3CC4P 4XROA 3MGEA 3CCRP 2Z46A 3CCJP 3H4EA 2XV6A 4U0CA 2L6EA 1VQ4P 3DS3A 2EFJA 3P05A 5JPAA 1IUQA 3RG6C 2E1MA 1VQLP 1RO2A 1E6JP 1QRJA 2PENA 4XFYA 3G4SP 1D1DA 4U0FA 4U0AA 3H47A 3G29A 3I56P 3CCEP 2OTLP 2XXMA 1YIJP 5F2KA 1Q86Q 3CCQP 3OW2O 3Q20A 2BHVA 5DCKA 2PEIA 1YJ9P 2JO0A 3G21A 5HGNA 3CC2P 3VRLC 2LF4A 3G1GA 2M8LA 2PEJA 1RO0A 3DS5A 1KC8Q 3I55P 2KODA 2OTJP 1VQ5P 1BAJA 4U0EA 1VQMP 3G6EP 3DS1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5BS2 A;  3HYB A;  2Z44 A;  4GR6 A;  2PEN A;  5BS1 A;  3Q20 A;  2Z45 A;  4GR2 A;  2PEK A;  2PEQ A;  2PEJ A;  2PEM A;  2PEO A;  2PEI A;  2PY8 A;  2Z46 A;  3RG6 C; 
#chains in the Genus database with same CATH topology
 2Z44 A;  2EG5 A;  1DV5 A;  2L4B A;  3H0D A;  2EIA A;  2M8N A;  1N8R Q;  1RNI A;  3CC7 P;  1W2B O;  2EHS A;  3DPH A;  5KP6 B;  2KWL A;  1IMP A;  1K30 A;  2JU1 A;  2K0D X;  4BPF A;  2MR7 A;  1CEI A;  1VKU A;  3CXC O;  2PEQ A;  3CCM P;  1VQN P;  2GDX A;  5KP7 B;  2L22 A;  1KQS O;  2K0X A;  1NJI Q;  1ACP A;  4GR2 A;  2VLO A;  3CCS P;  1VQ8 P;  3CCL P;  4PH0 A;  1S72 P;  2CNR A;  3G71 P;  1L0H A;  3G1I A;  2GZJ A;  5F2O A;  1Q81 Q;  5HGO A;  2GYK A;  2MY5 A;  4GR6 A;  1AF8 A;  4XFZ A;  2PY8 A;  2FAD A;  2XT1 A;  1L0I A;  3CC4 P;  2Z46 A;  4U0C A;  3DS3 A;  1UNK A;  1NQ4 A;  1QRJ A;  2ERH A;  2LIW A;  3CCE P;  3GJN A;  2JB0 A;  3CCQ P;  3G21 A;  2PNG A;  4PXH B;  3DS5 A;  2K92 A;  2K0Y A;  4DG9 A;  1VQ5 P;  1VQM P;  3DS1 A;  3GKL C;  3GZL A;  3DS2 A;  1Z6M A;  5HVC A;  5EJD A;  2GDW A;  2P9X A;  2M5R A;  2JYG A;  2LKI A;  4BPH A;  1KLP A;  2FHS C;  1F80 D;  5EW5 E;  1M6N A;  3G26 A;  4PH1 A;  1X3O A;  2KOR A;  2FVF A;  1Q7Y Q;  1VQO P;  1QVF O;  1FR2 A;  1ZMB A;  3WBH A;  4U0D A;  1Q82 Q;  1YJW P;  1VQ7 P;  1A43 A;  7CEI A;  1QVG O;  4M0I A;  2AVA A;  3U43 A;  2KG6 A;  5I4T G;  2VSQ A;  1KD1 Q;  2PEM A;  2JYL A;  2KW2 A;  4XFX A;  2KG8 A;  2XZ0 D;  2K5X A;  2L0Q A;  4QNB A;  4COP A;  1AUM A;  1K9M Q;  3CPW O;  1YHQ P;  2Z45 A;  2LL8 A;  3H4E A;  2EFJ A;  2KGC A;  5JPA A;  5HV8 A;  1VQL P;  1E6J P;  2PEN A;  1D1D A;  4U0F A;  3H47 A;  3I56 P;  2XXM A;  1YIJ P;  5F2K A;  4R0M A;  3OW2 O;  3CE7 A;  2JQ4 A;  3NY7 B;  1GPJ A;  2K93 A;  4UHP B;  1YJ9 P;  2JO0 A;  2N5H A;  3VRL C;  3G1G A;  2M8L A;  2KOP A;  1RO0 A;  2OTJ P;  2AFE A;  5KP8 B;  3G6E P;  1VQK P;  2GZI A;  4WYM A;  2FAC A;  2QNW A;  2MVV A;  3HYB A;  1M1K Q;  2CWO A;  4MRT C;  3B4Q A;  4XRQ A;  2K2Q A;  2X2B A;  1VQ9 P;  3E2D A;  3EJD A;  4H2X C;  4U0B A;  2LML A;  2KR5 A;  2KOO A;  1EOQ A;  2CG5 B;  2L9F A;  1IMQ A;  2KGA A;  3CCU P;  3G28 A;  1EIA A;  1A8O A;  4NEO A;  1GXH A;  2PEK A;  2DNW A;  3GZM A;  3DTJ A;  2VLN A;  2MF4 A;  2QEX P;  2LIU A;  3LRY A;  4BPG A;  3NTE A;  2CQ8 A;  3CD6 P;  2NO8 A;  1JJ2 O;  3CCV P;  2N98 A;  4XRO A;  3MGE A;  3CCR P;  3CCJ P;  2KGE A;  2LPK A;  3P05 A;  2LTE A;  1IUQ A;  2E1M A;  1BXI A;  2WPT A;  1RO2 A;  3G4S P;  1T8K A;  2FVE A;  2OTL P;  2JU2 A;  1Q86 Q;  2N6Y A;  1ZNV A;  5DCK A;  5HGN A;  2PEJ A;  2N6Z A;  1MZ8 A;  4H2Y C;  2FQ1 A;  1BAJ A;  4U0E A;  5F2N A;  1M74 A;  2GZF A;  4H2W C;  1M90 Q;  2FQ2 A;  2KGD A;  3CMA P;  1YIT P;  2DGY A;  3DS0 A;  3RG2 A;  3DS4 A;  2JBG A;  5BS1 A;  1K73 Q;  4IPY A;  2N50 A;  1HQB A;  2LOL A;  2K94 A;  2GZG A;  2KOQ A;  3B5I A;  1YJN P;  4HKG A;  2ONT A;  1VQP P;  1GXG A;  3HZQ A;  2EHT A;  2FVA A;  2CGQ A;  2FQ0 A;  4F37 A;  2VLQ A;  2JGP A;  2ROQ A;  2XZ1 C;  2MD9 A;  5HGM A;  3G0V A;  2OAR A;  1M6E X;  1OR5 A;  5CZD B;  4QKO A;  2KOS A;  2AFD A;  2QA4 P;  1YI2 P;  2KG9 A;  3LMO A;  1VQ6 P;  2M8P A;  3EJB A;  2PEO A;  1K8A Q;  5HGL A;  4CA3 A;  2BUO A;  1EMV A;  3M1M A;  2GZE A;  4COC A;  1HY8 A;  5BS2 A;  3CME P;  1DNY A;  1UJZ A;  2XV6 A;  2L6E A;  1VQ4 P;  2MVU A;  1AYI A;  2MR8 A;  4IZ6 A;  3EJE A;  3RG6 C;  4XFY A;  4U0A A;  3G29 A;  2JAZ A;  3Q20 A;  2BHV A;  2PEI A;  3CC2 P;  2LF4 A;  1VHN A;  1E0H A;  1KC8 Q;  3I55 P;  2AF8 A;  2KOD A;  2GDY A;  2N5I A;  2FAE A;  2VLP A;  4PWV B; 
#chains in the Genus database with same CATH homology
 5F2N A;  1M74 A;  2Z44 A;  1VQK P;  2EG5 A;  4WYM A;  3DS2 A;  3H0D A;  1M90 Q;  2EIA A;  2M8N A;  1N8R Q;  3HYB A;  1RNI A;  3CMA P;  1M1K Q;  2CWO A;  1YIT P;  2DGY A;  3CC7 P;  3DS0 A;  1W2B O;  3DS4 A;  3DPH A;  2P9X A;  5BS1 A;  1K73 Q;  4IPY A;  1K30 A;  4XRQ A;  2JYG A;  3B5I A;  1VQ9 P;  1YJN P;  3E2D A;  2ONT A;  4U0B A;  3CXC O;  1VQP P;  3HZQ A;  1M6N A;  3G26 A;  2PEQ A;  4PH1 A;  3CCM P;  1Q7Y Q;  1EOQ A;  1VQN P;  1VQO P;  5HGM A;  3G0V A;  1QVF O;  3CCU P;  1KQS O;  2OAR A;  1M6E X;  3G28 A;  1EIA A;  1NJI Q;  1ZMB A;  4GR2 A;  2QA4 P;  1YI2 P;  1A8O A;  3CCS P;  1VQ8 P;  3CCL P;  4PH0 A;  3WBH A;  4U0D A;  1Q82 Q;  1YJW P;  1VQ6 P;  1VQ7 P;  1A43 A;  2M8P A;  2PEK A;  1S72 P;  2PEO A;  3G71 P;  1QVG O;  3DTJ A;  4M0I A;  1K8A Q;  3G1I A;  5HGL A;  5I4T G;  2BUO A;  5F2O A;  1KD1 Q;  1Q81 Q;  3M1M A;  2PEM A;  2JYL A;  4XFX A;  2QEX P;  5HGO A;  3LRY A;  4COC A;  3NTE A;  4GR6 A;  3CD6 P;  1JJ2 O;  4XFZ A;  2PY8 A;  3CCV P;  4QNB A;  4COP A;  1AUM A;  1K9M Q;  5BS2 A;  3CME P;  3CPW O;  1YHQ P;  2Z45 A;  2XT1 A;  3CC4 P;  4XRO A;  3MGE A;  3CCR P;  2Z46 A;  3CCJ P;  3H4E A;  2XV6 A;  4U0C A;  2L6E A;  1VQ4 P;  3DS3 A;  2EFJ A;  3P05 A;  5JPA A;  1IUQ A;  3RG6 C;  2E1M A;  1VQL P;  1RO2 A;  1E6J P;  1QRJ A;  2PEN A;  4XFY A;  3G4S P;  1D1D A;  4U0F A;  4U0A A;  3H47 A;  3G29 A;  3I56 P;  3CCE P;  2OTL P;  2XXM A;  1YIJ P;  5F2K A;  1Q86 Q;  3CCQ P;  3OW2 O;  3Q20 A;  2BHV A;  5DCK A;  2PEI A;  1YJ9 P;  2JO0 A;  3G21 A;  5HGN A;  3CC2 P;  3VRL C;  2LF4 A;  3G1G A;  2M8L A;  2PEJ A;  1RO0 A;  3DS5 A;  1KC8 Q;  3I55 P;  2KOD A;  2OTJ P;  1VQ5 P;  1BAJ A;  4U0E A;  1VQM P;  3G6E P;  3DS1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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