2Z46A

Crystal structure of native-orf134
Total Genus 44
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
109
structure length
109
Chain Sequence
EFKKVAKETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMMLENKELVLRILTVRENLAEGVLEFLPEMVLSQIKQSNGNHRRSLLERLT
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Chaperone
molecule keywords ORF134
publication title Crystal Structure of ORF134
rcsb
source organism Synechococcus sp.
total genus 44
structure length 109
sequence length 109
chains with identical sequence B, C, D, E, F
ec nomenclature
pdb deposition date 2007-06-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02341 RcbX RbcX protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.210 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A 2z46A00
3RG6C 2PEJA 5BS2A 2Z46A 2PEIA 2PENA 2PEOA 2PEMA 2Z44A 2Z45A 2PEQA 3HYBA 4GR6A 3Q20A 4GR2A 5BS1A 2PEKA 2PY8A
chains in the Genus database with same CATH superfamily
3NTEA 4QNBA 4BPFA 2DGYA 2FVEA 2MF4A 5JPAA 4XROA 3LRYA 5F2KA 2KG9A 3DS0A 1VQ7P 1KD1Q 1F80D 2GDWA 1YJNP 1Q7YQ 2PEOA 2P9XA 1EIAA 1Z6MA 2MR7A 3RG2A 1QVFO 4CA3A 1AUMA 4U0BA 3G6EP 2KGAA 2CWOA 1QRJA 2GZGA 2L0QA 1YJ9P 2LIWA 1M74A 2N6ZA 3HYBA 4BPHA 1VQPP 2XZ0D 2FACA 4PH1A 1AF8A 2KGEA 2LOLA 2Z46A 2GYKA 1IMQA 2DNWA 2E1MA 4BPGA 1EOQA 2M8NA 3HZQA 2VLOA 5CZDB 3GZLA 2X2BA 2GZJA 2KOSA 3DS2A 5DCKA 2BHVA 2LF4A 2EFJA 3G26A 1BAJA 2JU1A 1UNKA 2MD9A 5F2NA 2GZFA 1ZMBA 4U0EA 3U43A 1GXGA 2K5XA 3B5IA 1K30A 2K94A 2VSQA 5KP6B 1VQ4P 2KWLA 2MVUA 1YIJP 1Q86Q 2XV6A 2PEJA 1KLPA 1K8AQ 2KGDA 2XT1A 2FQ0A 4MRTC 2EIAA 2N50A 1YHQP 2MY5A 3OW2O 2NO8A 2Z44A 2K0DX 4XFYA 3DS3A 1DNYA 1IMPA 1A8OA 2GZIA 1OR5A 1MZ8A 3RG6C 2KG6A 2VLQA 3CCJP 2PNGA 3GKLC 2ONTA 2EHTA 1ZNVA 4U0CA 1GXHA 5HGOA 2KR5A 3G1GA 1RO0A 4NEOA 4HKGA 1D1DA 2JBGA 3CXCO 3G4SP 2JAZA 2LIUA 3G29A 2GDXA 4U0FA 3CC4P 3DTJA 4XFZA 2QA4P 1S72P 1A43A 1K73Q 2L6EA 2LTEA 1Q81Q 1W2BO 4PXHB 2GZEA 4IPYA 3G28A 3I56P 3EJDA 2LKIA 1VHNA 2FVAA 5I4TG 2AVAA 2KGCA 1VQ8P 3I55P 3CCMP 2WPTA 3G21A 3Q20A 1E0HA 2FQ2A 2L4BA 1GPJA 1UJZA 7CEIA 1QVGO 5HGMA 2AF8A 2VLNA 2KOPA 1VQMP 2OTLP 3CCVP 1RNIA 2FQ1A 2CG5B 1Q82Q 2JB0A 3WBHA 2BUOA 3H4EA 1N8RQ 3DS1A 1RO2A 2PENA 2N6YA 2CGQA 5F2OA 1YJWP 2XXMA 5HV8A 2OARA 3CMAP 4PWVB 2MR8A 3CCRP 1VQ9P 1ACPA 4U0DA 2L9FA 4H2WC 1HQBA 2M8PA 5EW5E 1HY8A 3H47A 1X3OA 5KP8B 4COPA 3CPWO 2AFEA 2FADA 4GR2A 3CMEP 2CQ8A 3GJNA 2K0YA 2PEIA 2JYGA 2EHSA 1CEIA 2EG5A 1YI2P 1EMVA 3CC7P 4XRQA 5KP7B 2AFDA 2VLPA 3G71P 2N5IA 2FVFA 4UHPB 3CE7A 2GDYA 1L0HA 1VQLP 4IZ6A 3DS4A 1YITP 2FAEA 1VQ6P 3CCEP 2OTJP 2MVVA 3CCLP 1VKUA 3CCUP 1VQNP 2KG8A 2LMLA 5HVCA 2M5RA 4U0AA 1JJ2O 4H2YC 2L22A 1IUQA 2LL8A 2JGPA 2JQ4A 1KQSO 2N5HA 2CNRA 1AYIA 3GZMA 2KORA 2KOQA 4PH0A 2JYLA 4WYMA 1K9MQ 2KODA 1DV5A 4M0IA 4COCA 5BS2A 3E2DA 3M1MA 2LPKA 2Z45A 1KC8Q 3B4QA 1M90Q 1M6NA 3H0DA 2JO0A 3EJEA 1VQOP 2K93A 3CCSP 4QKOA 2KW2A 2M8LA 3MGEA 1E6JP 3VRLC 2K0XA 4F37A 2PEKA 5HGLA 1T8KA 2JU2A 5HGNA 2ROQA 2QEXP 2N98A 5BS1A 3DS5A 2QNWA 4GR6A 3LMOA 2PEQA 1M6EX 1NJIQ 3G1IA 1FR2A 1NQ4A 3P05A 4R0MA 3G0VA 3EJBA 3DPHA 3CCQP 4DG9A 2ERHA 2PY8A 4XFXA 1VQ5P 4H2XC 3NY7B 2XZ1C 3CD6P 2K2QA 1VQKP 1L0IA 3CC2P 5EJDA 2KOOA 1BXIA 2FHSC 2PEMA 1M1KQ 2K92A
chains in the Genus database with same CATH topology
1N8RQ 3NTEA 4QNBA 2XV6A 2DGYA 2PEJA 1K8AQ 3DS1A 1RO2A 2PENA 1IUQA 2XT1A 5JPAA 2EIAA 4XROA 1YHQP 5F2OA 3LRYA 3OW2O 1YJWP 1KQSO 5F2KA 2Z44A 4XFYA 3DS3A 2XXMA 2OARA 3DS0A 1VQ7P 1A8OA 1KD1Q 3CMAP 4PH0A 3CCRP 1YJNP 1VQ9P 2JYLA 4WYMA 4U0DA 1Q7YQ 2PEOA 3RG6C 1K9MQ 2KODA 2P9XA 1EIAA 1QVFO 4M0IA 4COCA 3CCJP 1AUMA 5BS2A 4U0BA 2M8PA 3E2DA 3G6EP 2CWOA 2ONTA 1QRJA 3M1MA 4U0CA 2Z45A 3H47A 1KC8Q 1M90Q 1M6NA 4COPA 5HGOA 3H0DA 3G1GA 3CPWO 2JO0A 1RO0A 1VQOP 1YJ9P 4GR2A 1M74A 3CMEP 3CCSP 1D1DA 2PEIA 3CXCO 3G4SP 2JYGA 3HYBA 2M8LA 3MGEA 3G29A 4U0FA 1VQPP 2EG5A 3CC4P 3DTJA 1E6JP 4PH1A 1YI2P 3VRLC 4XFZA 2QA4P 2Z46A 1S72P 1A43A 1K73Q 2E1MA 2PEKA 2L6EA 3CC7P 4XRQA 5HGLA 1Q81Q 1EOQA 2M8NA 5HGNA 1W2BO 3HZQA 4IPYA 3G28A 2QEXP 5BS1A 3I56P 3DS5A 3DS2A 3G71P 5DCKA 4GR6A 5I4TG 2BHVA 2PEQA 1M6EX 2LF4A 1VQ8P 3I55P 3CCMP 2EFJA 3G1IA 3G21A 3G26A 1NJIQ 1BAJA 3P05A 1VQLP 3Q20A 3G0VA 3DS4A 5F2NA 1YITP 1VQ6P 3DPHA 3CCQP 1ZMBA 1QVGO 3CCEP 2PY8A 4U0EA 4XFXA 2OTJP 1VQ5P 5HGMA 3CCLP 3B5IA 1K30A 3CD6P 2OTLP 1VQMP 1VQKP 3CCUP 1VQNP 1VQ4P 3CCVP 1RNIA 3CC2P 4U0AA 1Q82Q 1YIJP 2PEMA 1Q86Q 3WBHA 1JJ2O 2BUOA 1M1KQ 3H4EA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RG6 C;  2PEJ A;  5BS2 A;  2Z46 A;  2PEI A;  2PEN A;  2PEO A;  2PEM A;  2Z44 A;  2Z45 A;  2PEQ A;  3HYB A;  4GR6 A;  3Q20 A;  4GR2 A;  5BS1 A;  2PEK A;  2PY8 A; 
#chains in the Genus database with same CATH topology
 3NTE A;  4QNB A;  4BPF A;  2DGY A;  2FVE A;  2MF4 A;  5JPA A;  4XRO A;  3LRY A;  5F2K A;  2KG9 A;  3DS0 A;  1VQ7 P;  1KD1 Q;  1F80 D;  2GDW A;  1YJN P;  1Q7Y Q;  2PEO A;  2P9X A;  1EIA A;  1Z6M A;  2MR7 A;  3RG2 A;  1QVF O;  4CA3 A;  1AUM A;  4U0B A;  3G6E P;  2KGA A;  2CWO A;  1QRJ A;  2GZG A;  2L0Q A;  1YJ9 P;  2LIW A;  1M74 A;  2N6Z A;  3HYB A;  4BPH A;  1VQP P;  2XZ0 D;  2FAC A;  4PH1 A;  1AF8 A;  2KGE A;  2LOL A;  2Z46 A;  2GYK A;  1IMQ A;  2DNW A;  2E1M A;  4BPG A;  1EOQ A;  2M8N A;  3HZQ A;  2VLO A;  5CZD B;  3GZL A;  2X2B A;  2GZJ A;  2KOS A;  3DS2 A;  5DCK A;  2BHV A;  2LF4 A;  2EFJ A;  3G26 A;  1BAJ A;  2JU1 A;  1UNK A;  2MD9 A;  5F2N A;  2GZF A;  1ZMB A;  4U0E A;  3U43 A;  1GXG A;  2K5X A;  3B5I A;  1K30 A;  2K94 A;  2VSQ A;  5KP6 B;  1VQ4 P;  2KWL A;  2MVU A;  1YIJ P;  1Q86 Q;  2XV6 A;  2PEJ A;  1KLP A;  1K8A Q;  2KGD A;  2XT1 A;  2FQ0 A;  4MRT C;  2EIA A;  2N50 A;  1YHQ P;  2MY5 A;  3OW2 O;  2NO8 A;  2Z44 A;  2K0D X;  4XFY A;  3DS3 A;  1DNY A;  1IMP A;  1A8O A;  2GZI A;  1OR5 A;  1MZ8 A;  3RG6 C;  2KG6 A;  2VLQ A;  3CCJ P;  2PNG A;  3GKL C;  2ONT A;  2EHT A;  1ZNV A;  4U0C A;  1GXH A;  5HGO A;  2KR5 A;  3G1G A;  1RO0 A;  4NEO A;  4HKG A;  1D1D A;  2JBG A;  3CXC O;  3G4S P;  2JAZ A;  2LIU A;  3G29 A;  2GDX A;  4U0F A;  3CC4 P;  3DTJ A;  4XFZ A;  2QA4 P;  1S72 P;  1A43 A;  1K73 Q;  2L6E A;  2LTE A;  1Q81 Q;  1W2B O;  4PXH B;  2GZE A;  4IPY A;  3G28 A;  3I56 P;  3EJD A;  2LKI A;  1VHN A;  2FVA A;  5I4T G;  2AVA A;  2KGC A;  1VQ8 P;  3I55 P;  3CCM P;  2WPT A;  3G21 A;  3Q20 A;  1E0H A;  2FQ2 A;  2L4B A;  1GPJ A;  1UJZ A;  7CEI A;  1QVG O;  5HGM A;  2AF8 A;  2VLN A;  2KOP A;  1VQM P;  2OTL P;  3CCV P;  1RNI A;  2FQ1 A;  2CG5 B;  1Q82 Q;  2JB0 A;  3WBH A;  2BUO A;  3H4E A;  1N8R Q;  3DS1 A;  1RO2 A;  2PEN A;  2N6Y A;  2CGQ A;  5F2O A;  1YJW P;  2XXM A;  5HV8 A;  2OAR A;  3CMA P;  4PWV B;  2MR8 A;  3CCR P;  1VQ9 P;  1ACP A;  4U0D A;  2L9F A;  4H2W C;  1HQB A;  2M8P A;  5EW5 E;  1HY8 A;  3H47 A;  1X3O A;  5KP8 B;  4COP A;  3CPW O;  2AFE A;  2FAD A;  4GR2 A;  3CME P;  2CQ8 A;  3GJN A;  2K0Y A;  2PEI A;  2JYG A;  2EHS A;  1CEI A;  2EG5 A;  1YI2 P;  1EMV A;  3CC7 P;  4XRQ A;  5KP7 B;  2AFD A;  2VLP A;  3G71 P;  2N5I A;  2FVF A;  4UHP B;  3CE7 A;  2GDY A;  1L0H A;  1VQL P;  4IZ6 A;  3DS4 A;  1YIT P;  2FAE A;  1VQ6 P;  3CCE P;  2OTJ P;  2MVV A;  3CCL P;  1VKU A;  3CCU P;  1VQN P;  2KG8 A;  2LML A;  5HVC A;  2M5R A;  4U0A A;  1JJ2 O;  4H2Y C;  2L22 A;  1IUQ A;  2LL8 A;  2JGP A;  2JQ4 A;  1KQS O;  2N5H A;  2CNR A;  1AYI A;  3GZM A;  2KOR A;  2KOQ A;  4PH0 A;  2JYL A;  4WYM A;  1K9M Q;  2KOD A;  1DV5 A;  4M0I A;  4COC A;  5BS2 A;  3E2D A;  3M1M A;  2LPK A;  2Z45 A;  1KC8 Q;  3B4Q A;  1M90 Q;  1M6N A;  3H0D A;  2JO0 A;  3EJE A;  1VQO P;  2K93 A;  3CCS P;  4QKO A;  2KW2 A;  2M8L A;  3MGE A;  1E6J P;  3VRL C;  2K0X A;  4F37 A;  2PEK A;  5HGL A;  1T8K A;  2JU2 A;  5HGN A;  2ROQ A;  2QEX P;  2N98 A;  5BS1 A;  3DS5 A;  2QNW A;  4GR6 A;  3LMO A;  2PEQ A;  1M6E X;  1NJI Q;  3G1I A;  1FR2 A;  1NQ4 A;  3P05 A;  4R0M A;  3G0V A;  3EJB A;  3DPH A;  3CCQ P;  4DG9 A;  2ERH A;  2PY8 A;  4XFX A;  1VQ5 P;  4H2X C;  3NY7 B;  2XZ1 C;  3CD6 P;  2K2Q A;  1VQK P;  1L0I A;  3CC2 P;  5EJD A;  2KOO A;  1BXI A;  2FHS C;  2PEM A;  1M1K Q;  2K92 A; 
#chains in the Genus database with same CATH homology
 1N8R Q;  3NTE A;  4QNB A;  2XV6 A;  2DGY A;  2PEJ A;  1K8A Q;  3DS1 A;  1RO2 A;  2PEN A;  1IUQ A;  2XT1 A;  5JPA A;  2EIA A;  4XRO A;  1YHQ P;  5F2O A;  3LRY A;  3OW2 O;  1YJW P;  1KQS O;  5F2K A;  2Z44 A;  4XFY A;  3DS3 A;  2XXM A;  2OAR A;  3DS0 A;  1VQ7 P;  1A8O A;  1KD1 Q;  3CMA P;  4PH0 A;  3CCR P;  1YJN P;  1VQ9 P;  2JYL A;  4WYM A;  4U0D A;  1Q7Y Q;  2PEO A;  3RG6 C;  1K9M Q;  2KOD A;  2P9X A;  1EIA A;  1QVF O;  4M0I A;  4COC A;  3CCJ P;  1AUM A;  5BS2 A;  4U0B A;  2M8P A;  3E2D A;  3G6E P;  2CWO A;  2ONT A;  1QRJ A;  3M1M A;  4U0C A;  2Z45 A;  3H47 A;  1KC8 Q;  1M90 Q;  1M6N A;  4COP A;  5HGO A;  3H0D A;  3G1G A;  3CPW O;  2JO0 A;  1RO0 A;  1VQO P;  1YJ9 P;  4GR2 A;  1M74 A;  3CME P;  3CCS P;  1D1D A;  2PEI A;  3CXC O;  3G4S P;  2JYG A;  3HYB A;  2M8L A;  3MGE A;  3G29 A;  4U0F A;  1VQP P;  2EG5 A;  3CC4 P;  3DTJ A;  1E6J P;  4PH1 A;  1YI2 P;  3VRL C;  4XFZ A;  2QA4 P;  2Z46 A;  1S72 P;  1A43 A;  1K73 Q;  2E1M A;  2PEK A;  2L6E A;  3CC7 P;  4XRQ A;  5HGL A;  1Q81 Q;  1EOQ A;  2M8N A;  5HGN A;  1W2B O;  3HZQ A;  4IPY A;  3G28 A;  2QEX P;  5BS1 A;  3I56 P;  3DS5 A;  3DS2 A;  3G71 P;  5DCK A;  4GR6 A;  5I4T G;  2BHV A;  2PEQ A;  1M6E X;  2LF4 A;  1VQ8 P;  3I55 P;  3CCM P;  2EFJ A;  3G1I A;  3G21 A;  3G26 A;  1NJI Q;  1BAJ A;  3P05 A;  1VQL P;  3Q20 A;  3G0V A;  3DS4 A;  5F2N A;  1YIT P;  1VQ6 P;  3DPH A;  3CCQ P;  1ZMB A;  1QVG O;  3CCE P;  2PY8 A;  4U0E A;  4XFX A;  2OTJ P;  1VQ5 P;  5HGM A;  3CCL P;  3B5I A;  1K30 A;  3CD6 P;  2OTL P;  1VQM P;  1VQK P;  3CCU P;  1VQN P;  1VQ4 P;  3CCV P;  1RNI A;  3CC2 P;  4U0A A;  1Q82 Q;  1YIJ P;  2PEM A;  1Q86 Q;  3WBH A;  1JJ2 O;  2BUO A;  1M1K Q;  3H4E A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...